Carassius auratus (goldfish): 113066908
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Entry
113066908 CDS
T07313
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113066908
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113066908
03036 Chromosome and associated proteins [BR:
caua03036
]
113066908
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113066908
Coactivators
SAGA/TFTC/STAGA complex
113066908
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113066908
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
113066908
NCBI-ProteinID:
XP_026094813
Ensembl:
ENSCARG00000035543
UniProt:
A0A6P6ME73
LinkDB
All DBs
Position
50:9267837..9312554
Genome browser
AA seq
945 aa
AA seq
DB search
MAGVPDPLEDMLYSEVDEKAVSDLVGSLESQLGGQNKAVGPQGDTRRPSNTLNPHLGKLP
PAQVGTTLEQQRQPERNQEGNSEENGPGRIPASSSVPSTSNLTNTSANSVAVAKRVQYHS
SSPSTCSSDAAPTDSHANTNHIASAVRTVPARIQTVNGSSGTLNSSVIASAPASVNGIDI
GSGVGNGKSDMSAPTSTNTAFVPAQPSSTLPHANMSLDSQANPTIALHRPPNTITSIVHN
GGDPKVSGLPVQGAGLVPTSVAFTNTEPKPDLQNQIKAIVPNKLPGTPVGLRPSTPTQII
VSSSPVVTSLPVASTPSVLAKPATTALVGQPTTLLRPGTPIQGTATAVPPQRPGAPTTQL
IVRPQQQTTIQLPPGFTIPPGMVLVRTEAGQLALVPQQVLAQAKAQNQNKGTLSPRPATP
TAGTAFRVTTPVAQQKTAVVTITSAQKPTTTVITAGARVQPAPQTVLKPSVSPQSPITTP
AAAPANRAPVLSQEMQENVKKCRNFLATLIKLASHNSPSPETSRNVKALVQDLLDAKIEP
EEFTNRLQTELKSSPQPYLIPFLKKSLPALRLTLLNSQQSLTQLSQTATTSTPLSVNTIK
APAPSTQPTTVSAIRPAAALASTTTMAVKRPGVQATPTRMPMVITQTVRAQGAFGTPLQV
RSPMSVAVQAMANQKQKLNDPGGGTFRDDDDINDVASMAGVNLNEENARILATGSELVGT
QIHSCKDEAFLPASLLHKRLLETAKKFGVTEMSMETVTLISHATQSRLRSMLEKVSAVAQ
HRADACKDEELYEQASDVRTQLKFFEQLEKIEKQRKDDEERELLMKAAKSRSRQEDPEQA
RLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKLDSPGASAGAEFPAGSSGSATGS
TSSSTSSVRQTRQRVTRVNLRDLIFCLEQERTTARSMLLYKALLK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtccccgatccactggaagatatgctctactccgaagtggacgaaaaagcc
gtcagtgaccttgtaggctcgttagaatcgcagttgggtggacaaaacaaggcggtcggt
cctcaaggcgacactaggagaccctcaaacacgctaaatccacacttgggtaaactgccg
cccgcccaagtaggaacaacactggagcagcagcgacagccagagcgaaaccaggaggga
aactctgaagagaacggtccgggtaggataccagcgtccagttctgtcccgtccacctcg
aacctgactaacacctctgcgaattcggttgcagtcgcgaaacgggtgcaatatcattca
tcaagcccatcaacttgttcaagtgacgcagcacctacagactctcacgccaatacaaat
cacatcgcgtctgctgtccggacggttcccgccagaatacagactgtgaacggaagcagt
ggcacgttaaactcttctgtcatcgcttctgctcctgcttctgtgaacggaattgacatt
ggttcaggtgtaggtaatggtaaaagcgacatgtctgctcctactagtacaaatactgct
tttgtgcctgctcagcccagcagcacactgccacatgcgaatatgtcactagatagtcaa
gcaaaccccaccattgcactgcacaggcctcctaacaccatcacaagtatcgtacacaac
ggaggtgaccccaaagtctcaggattgcccgtgcagggtgccggtcttgtgcccacatct
gtggcattcacaaacacagagcccaaacctgatcttcaaaaccagattaaagccatcgtc
ccgaacaagcttcccgggactcccgtaggattgcgccccagcactcccactcagattata
gtgtcgtccagtccagtggtgacctcacttcctgtggcaagcacaccctctgtccttgca
aagccagcaacgactgctctcgtaggacagcctacgaccctgttgagacccggtaccccc
attcaggggacggcgactgcggtgcccccacagcgtccaggggctcctacgacccagctg
atcgtcagaccgcagcaacaaactaccattcagttaccgccgggattcaccatacctcca
ggtatggtgctggtacgcacggaggctggacagctggcactggttcctcagcaggtccta
gcccaggccaaagctcagaaccaaaataaaggcaccctgtcaccaagacctgctacaccc
accgctggaacggctttcagagtcactacacctgttgcccagcagaagacagcagtggtg
acaatcacctcggctcagaagcccaccaccacagtcattacagcaggggcccgtgtgcag
cctgcgccgcagacagtcctcaagccctccgtgtcccctcagagtcccatcaccacccct
gctgctgccccagctaacagagcccctgtcctctctcaggaaatgcaagagaatgtaaag
aagtgcaggaacttcctagcgacgctcatcaaactggcatcccataattccccctcgcca
gaaacatctcggaatgtgaaggcactagtgcaggatctgctggacgcaaaaattgagcct
gaggagtttacaaatcgccttcagacggagttgaaatcatctcctcaaccgtacctgatc
ccttttttgaagaaaagcctgcctgctctgcgtctgactcttctgaattcccagcaatct
ttaactcagctgtctcagactgctactacatccaccccactgtcggtgaacacaattaaa
gctccagcgccgagcacacagcccaccactgtatctgccatcagaccagctgctgccctg
gcttccactacaaccatggctgttaagaggcctggggttcaggctactccgacacggatg
ccgatggtgattacacagacagtccgtgctcaaggtgcttttgggacacccttgcaagtg
aggagccccatgagtgtggctgttcaagccatggccaatcagaaacagaagctgaatgac
cccgggggtgggactttcagggatgatgatgacatcaatgacgtggcgtccatggctggt
gtgaacctaaatgaggagaacgcccgtatcttggccacaggttcagagctggtgggcacc
cagatccattcctgtaaggacgaggccttccttcctgccagcctgctacacaaacggctc
ctggagactgccaagaagttcggcgtgacagagatgtcaatggagacggtcactctcatt
tctcacgccactcagtccaggctgcgctccatgctggagaaagtctcggccgttgcgcaa
caccgcgctgacgcctgcaaagatgaggagctgtacgagcaggcatcagatgtgcggacc
cagctgaaattctttgagcagctggagaagattgagaagcagaggaaagatgatgaagaa
cgggagctgctcatgaaagccgcaaaaagtcgctcgaggcaggaggatcccgaacaggct
cggcttaaacagaaagctaaagagatgcagcagcaggaactcgcccagatgagacagcgg
gatgccaacctcacagccctagccgccatcggaccccgcaagaaacgcaagcttgactct
cctggggcctcagcaggtgcagagtttcctgcaggctcctccggatcagcgaccggttct
acctcatcctccacatcctcagtccggcagacccggcagcgcgtcacccgggtcaacctc
agggacttgatcttctgcttggagcaggagcgaaccacagccaggtccatgctgctctac
aaggcccttctgaagtag
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integrated database retrieval system
