Carassius auratus (goldfish): 113067216
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Entry
113067216 CDS
T07313
Symbol
rpgrip1l
Name
(RefSeq) protein fantom
KO
K16550
protein fantom
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113067216 (rpgrip1l)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113067216 (rpgrip1l)
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113067216 (rpgrip1l)
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
MKS complex
113067216 (rpgrip1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2-C2_1
RPGR1_C
C2
MAP10_N
Motif
Other DBs
NCBI-GeneID:
113067216
NCBI-ProteinID:
XP_026095320
Ensembl:
ENSCARG00000070171
UniProt:
A0A6P6MFL5
LinkDB
All DBs
Position
50:17802406..17827883
Genome browser
AA seq
1265 aa
AA seq
DB search
MMFARADETAGDIPVKDITVSPNGAATLPEALLSQNVRERQNVSKFSREELEDKFLRLQD
ENLTLKQHTCKQEDKIRRMATKLIRLVKDRKQSEGGRVVGSRDVEMEEMMEELQEKVQDL
EKQNEGLKRRLLATKQQLQVQSRRHTPYSHIQPRINSGLRRLRDVMPMASSRPHTPKAGI
GPVEGDLSAKPPQGLLPRYGHSLLDEARAEIRNLENIIESQQAQMEELERSAEMLRDQLK
RKEREFEESLLQMREHQASGQRLTIKDNVEMIKLQKLLSEKANTLTVLEGRFLQQQESMK
TLKASHDAALVKVDEVSRQLKEERLKSLQLETQIQTRALDQRRTQELQERIQDLEKEKDL
LKENCDKLVKSAFDVSQEQKWKTREQQLKLQVAQLEMALKSDLGDKNQILDKIKTERDLN
EKLMQENRELQLRYLEQKQQLDEIKERMKYFTKESEIDAAELSEALMLIKVRRSQKSGEL
GFLEKVEEDVKVDVERSLRELQASHAETIQELEKTRNMLIIQHKINKDYQGEVEAVTRAM
DDLKLEHEMKAEKMAQLLDMRAAKIKKLEAQLKDIAYGTKTHVFRPDVTSDDVTDEFDES
LRLARGENLLEIHLGKAQFSPEAVESLKDKDPSTFCTYAFYDFELQSTAVVRGTHPAYSL
TSQYLVRVDDLFLNYLHSSSVTVEVQLAEGLSFRTVAAGQLRLNQLLERDGKVFGTIQLV
GVTDEIQVFGALEYWLKLRVPMEQAIRLYKERVKALGYLNTSMRDSQALVPSSPSLMDGD
LNELNITIHSCCDLRSRGPHTQPSPYIIYKLYHFPDHDTPIISSTNEPQFEDHMVFPVAM
NSDLDALLRSEALVFYVFDDLDVENQLYLGKARVPLISLAHDKTITGMFELTDPEGRPSG
QISVTLKWKFPYLPPTSSAITTLQTTTPDRQTSQNKEKTHTETQPMTRDPPLIPQPTMSE
APMPKPRQRTLPKSTAKRVSFVDVTELERKMDQTTASDEGDDEEPKSTLTPAPKSVLVME
AGEATAISEEEDEEESHFSEGQVITASSQSDESEISEELQEPLADIQGEDDDSDDCIVPA
QSSQHKKQPSECIRVEIVSMSLKPGSRVAEDGAIVRLFVEYSFLGLPSVETPLSLKKPLP
GHSVSYNFSNVIHVDKESNQLRRQTLRTVLEGRNRQLEHIKFTVVSDPPEEEEQDEECED
VGVAYLRILDIMEKHRDMKDVSLNVVDVQDSSEVVGHLVVTVEALEALTSIMKDPERDQT
LTTLA
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttgctcgtgctgatgagacagctggcgatattcctgtgaaagacatcactgtc
agcccaaatggagccgctacattgcctgaggccctactgtctcagaatgtcagagagaga
cagaacgtgtctaaattcagcagggaggagctggaggacaaatttctacggctgcaggat
gaaaacctcacgcttaaacaacatacatgcaaacaagaagacaagatccgcaggatggcc
accaagttgattcgtctggttaaggaccgtaagcagagcgaggggggtcgtgtagtgggc
agtcgagatgtggagatggaggagatgatggaggagctgcaggagaaggttcaggatctg
gagaaacagaacgaagggctcaaacggcgtctgttagcaaccaaacagcagctgcaggtg
cagagccgcagacacactccctacagccacatccaaccacgcatcaactctggcctccgc
agactcagagacgtcatgcctatggcatcatcacgaccacacactcccaaagcaggtatt
gggcctgttgaaggggacttgagtgcaaaaccacctcagggtttgttgccccgctatgga
catagtctgctggatgaggcccgtgctgaaatccgcaacctagagaatataattgaaagc
cagcaagctcagatggaggagttggagagatcagcggagatgctgagagatcaactgaag
aggaaagagagagagtttgaggaatcactcctccagatgagagagcatcaggccagtgga
cagaggttaactataaaggataatgtggagatgatcaaactacagaagctgttgtctgag
aaagcaaacacactcacagtgctggagggcagatttctacagcaacaggagagtatgaag
actctgaaggccagtcatgatgcagcgctggtgaaggtggatgaagtgagccgacagctg
aaggaggagagattaaagagtttacagctggagacacagattcagaccagagctctggac
cagagacgcacacaagagttacaagagagaatccaagatttggagaaggagaaagacctg
ctcaaggaaaactgtgataaattagtgaaaagtgcgtttgatgtgagtcaggagcagaaa
tggaagacgagagaacagcagctcaaactacaggtcgcccagctagagatggcattaaaa
tctgacctcggtgataaaaaccagatcctggataagatcaagacagagagagatttaaat
gaaaaactgatgcaagaaaacagggaacttcagctgcgttatctcgagcagaaacaacaa
ctggatgaaattaaagagcgcatgaagtacttcaccaaggaaagtgaaatagatgcagct
gaactcagtgaagccctcatgcttataaaggttcgtaggagtcagaagagtggagagctt
gggtttctggagaaggtggaggaagatgtgaaagtggatgtggagcgatctttgagggaa
ctgcaggcctctcatgctgagaccatccaagagctggagaagacaaggaacatgctcatc
atccaacacaagatcaataaagactatcagggtgaggttgaagcggtcactcgagcgatg
gacgatctgaaacttgaacatgaaatgaaggctgagaagatggctcagcttctggacatg
agagctgccaagataaagaaacttgaagcccagctaaaggacattgcatatggaaccaag
acccatgtgttcagaccggatgtgaccagcgatgatgttacagatgagtttgatgaaagc
ctccgcttggctcgaggcgagaaccttctggaaattcacttggggaaagcgcagttctct
cccgaagctgtagaaagtcttaaggacaaagatccgtccaccttctgcacgtacgccttc
tacgactttgagctgcagtccacggctgtggttcgtggtacccatccagcgtacagcctc
acgtctcagtatctggtgagggtggacgacctcttcttgaactatctccacagcagctca
gttacggtggaggttcagctcgctgagggtctgagcttccgcacggtggctgctggtcag
ctcaggttgaatcagctgctggaacgagacgggaaggtgtttggcaccattcagttagtt
ggtgttacagatgagatccaggtgttcggtgctctagagtactggctcaaactcagggtt
cctatggaacaagccattcgcctttataaggagagagtcaaagcacttggttacctcaac
acaagcatgagggacagccaggctttggtccctagttccccatcattgatggatggcgat
ctaaatgaactaaacatcaccatacactcctgctgtgatctcagatccagaggtcctcac
acccaacccagcccctacatcatctacaaactctaccacttccctgaccatgatactcca
atcatatcctccaccaatgagccgcagttcgaagatcacatggtcttcccggtggccatg
aactctgacctggatgcgctcctgaggtcagaggctctggtgttttatgtgtttgatgat
ttggatgttgagaaccagctgtatctggggaaggccagagtaccgctcatctcgctggct
cacgataaaaccatcactggtatgtttgagctcacagaccctgagggacgtccgagcggc
caaatcagtgtgactttgaaatggaagttcccgtaccttcctccaacatcctcggctatc
accacactacagaccacgacaccggacagacagacatcccaaaacaaggagaagacccac
acagagacacaaccgatgaccagagaccctccactaatacctcagcccactatgtctgag
gctccaatgcccaaaccaaggcagcgaacgctaccaaaatcaactgctaaaagagtttcg
ttcgtggatgttacagagcttgaaagaaagatggaccagactacagcctctgatgaaggt
gatgatgaagagccgaaatcaactttgacccctgcaccaaagagtgtcctagtgatggaa
gcaggggaggccactgcgatcagtgaggaagaggatgaggaagagtctcatttctccgag
ggtcaggtgatcaccgccagctctcagtctgacgagtcggagatctctgaggagctgcag
gagccactagcagacatacagggtgaggatgatgatagcgatgactgcattgttcctgct
cagagctcacagcataaaaaacagccgtccgagtgcattcgtgtggagatcgtttcaatg
agtctgaagccaggatcaagagtggcggaagacggtgcgattgtccgactgtttgtggag
tactctttcctgggcctgccatcagtcgagaccccactgtctctaaagaaacctctgcct
ggacacagcgtctcctacaacttcagcaatgtgatccatgtggataaggagagtaaccag
ctcagacggcaaactctgaggacagtgctggagggtcggaacagacaactagagcacata
aagttcacggtggtgagtgaccctcctgaagaagaggagcaggacgaggagtgtgaggat
gtgggcgtggcctacctgcgtattctcgatatcatggagaaacacagagacatgaaggac
gtcagcctcaacgttgtggacgttcaggacagcagtgaagttgttggccatctagttgtg
accgttgaagctctggaggctctaacatccatcatgaaagatccagagcgtgatcaaact
ctaactacacttgcttaa
DBGET
integrated database retrieval system