Carassius auratus (goldfish): 113067376
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Entry
113067376 CDS
T07313
Name
(RefSeq) nuclear pore complex protein Nup85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113067376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113067376
03036 Chromosome and associated proteins [BR:
caua03036
]
113067376
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113067376
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113067376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
113067376
NCBI-ProteinID:
XP_026095537
Ensembl:
ENSCARG00000059268
UniProt:
A0A6P6MGM9
LinkDB
All DBs
Position
LG28B:complement(8481074..8487250)
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AA seq
649 aa
AA seq
DB search
MEELDVEPSTTLIPGVGFHQKHLGFEWGPGDLLVYETNYRLQGPRSASSPLVHIVRRDED
ICSPILRKLFNESHLIFVGLQKLKEDVPSKNKKSQFVSVSKNYRSVIRACMEELQQNAVS
TREGPLASQYGDQVSILLAIELIWNLCEVLFIDAAPAGSLLLLLLDWVRLHKSDVDTRAR
EVLQSESPALHQSYWDVVISLVLQGRTDEARQVLSKQASLRAESSSVFKRMDGLLQSMPI
FNPAGTQTLTEFDVKWRHWHEECDRCLQDNTFASSRQLETICKILVGDEDTLLEQKELLS
TWYHFLVTRLLFTHPTIKPPDLHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKAIKVLRICEDRQMSEQVRSICKIMAKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYSNKGSFTDLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSEAARLLLSLMTAKIAPRSLWMTLLTDALPLLEQKEVIFSVDQTYELMS
CLEELNLDSKDSNQTDQDEDIESTKTELLRLALARNLAMAIVKEGTIET
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggatgtagagcccagtaccacgctgattcccggcgttggatttcatcag
aagcacttgggttttgaatggggtcctggagatctgttggtgtatgagacaaactacaga
ctacaaggtccgaggtctgccagctctccgctcgttcacatagtgaggagagatgaagac
atctgctctcccatcctgcgcaaactcttcaacgagtcccatctcatcttcgtggggctg
cagaaactcaaagaggacgtgcccagcaagaacaagaagtcacagtttgtgagcgtcagt
aagaactacaggtctgtgatccgagcgtgtatggaggagctgcagcagaacgcagtttca
actcgagagggtccgttagcgtcacagtatggagatcaggtctctattctcttggcgatc
gagctcatatggaacttgtgtgaggttctgttcatcgacgcagcgccagccggatctctg
ctgctcctcctgctggattgggtgcgtctgcacaagtcggacgtggacacgagagcaaga
gaggtgttacagagcgaaagccctgccctgcatcagtcctactgggatgtggtgatcagt
ttggtcctgcagggccgtacggatgaagcccgtcaggtgctgtccaaacaggcgtctctg
cgggccgagagcagctctgtgttcaaacgcatggacggcctgttacagagcatgcccatc
tttaaccccgcaggaactcaaacgctgactgagtttgatgtcaagtggagacactggcac
gaggagtgtgaccgctgtctacaagacaacaccttcgctagcagccgtcagctggagacc
atctgcaagatcctggtgggtgatgaggacacgttactggagcagaaagagctgctgagc
acctggtatcacttcctggtcacacggctgctcttcactcacccgacaatcaaaccgccc
gacctgcactactacgcacaatcgagcatgaacatgtttctgggtccacgggcgtctccg
gagcctctggacatcatcctgctgtcagcctttgagttcgacctgcatcaggtgatcaaa
gactgcagcattgcgctcaacaactggtggttcgtggctcatctgacggatctgctggat
cactgcaaactcctgcagtcacacaacctccattttgggtctaatctgcgtgagtttctg
gttttggagtatgcctcgggactcttcacgcatcacagtctgtggcagctggcggtggat
tatttcgatcactgtcctgagttcggtcgtgtgtatctggagctgcagatcgagagagtc
ccgctcgacaccgaacgcaaggccattaaagtcctgcggatctgtgaggaccgacagatg
agtgaacaggtgcgcagtatctgtaagatcatggctaaaagagctctgaggaacaacaga
ctgggatctgctctgtcctggagcatcagagccaaagacgctgcgttcgctactctcatc
tccgagaggtttcttcaggattacagtaacaaaggctctttcacagatctggatttgttg
gataatctgggtcccgccatgctgctcagtgacagactgacgtttttaggaaagtaccgt
gagtttcacaggctttacggtgagaagcgtttctccgaggcggccagactccttctctcc
ctcatgacggcaaagatcgctccacgcagtctgtggatgacgctgctgaccgatgcgctg
cctctgctggagcagaaagaggtgatcttctcagtggatcagacgtatgagctcatgtcc
tgtctggaggagctgaacttagacagcaaagactcaaaccagacagaccaggatgaagat
atcgagtccacgaagacggagctcctgagactcgctctggcccgtaacctcgcaatggcc
atcgtcaaagagggaacaatagaaacataa
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