Carassius auratus (goldfish): 113067856
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Entry
113067856 CDS
T07313
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113067856
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113067856
03036 Chromosome and associated proteins [BR:
caua03036
]
113067856
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113067856
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
113067856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
113067856
NCBI-ProteinID:
XP_026096135
Ensembl:
ENSCARG00000025341
UniProt:
A0A6P6MHC0
LinkDB
All DBs
Position
LG28B:complement(5828557..5836129)
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AA seq
649 aa
AA seq
DB search
MEELDVEPSTTLIPGVGFHQKHLGFEWGPGDLLVYETNYRLQGPRSASSPLLHMVRRDED
ICSPILRKLFNESHLIFVGLQKLKEDVPSKNKKSQFVSVSKNYRSVIRACMEELQQNAVS
TREGSLASQYGDQVSILLAIELIWNLCEVLFIDAAPAGSLLLLLLDWVRLHKSDVDTRAR
EVLQSESPALHHSYWDVVISLVLQGRTDEARQVLSKQASLRAESSSVFKRMDGLLQTMPI
FNPAGTQTLTEFDVKWRHWHEECDRCLQDNTFASSRQLETICKILVGDEDTLLEQKELLS
TWYHFLVTRLLFTHPTIKPPDLHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTERKAIKVLRICEDRQMSEQVRSICKIMAKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYSNKGSFTDLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSEAARLLLSLMTAKIAPRSLWMTLLTDALPLLEQKEVIFSVDQTYELMS
CLEELNLDSKDSNQTDQDEDIESTKTELLRLALARNLAMAIVKEGTIET
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggatgtagagcccagtaccacgctgattcccggcgttggatttcatcag
aagcacttgggttttgaatggggtcctggagatctgttggtgtatgagacaaactacaga
ctacaaggtccgaggtctgccagctctccgctccttcacatggtgaggagagatgaagac
atctgctctcccatcctgcgcaaactcttcaacgagtcccatctcatcttcgtggggctg
cagaaactcaaagaggacgtgcccagcaagaacaagaagtcacagtttgtgagcgtcagt
aagaactacaggtctgtgatccgagcgtgtatggaggagctgcagcagaacgcagtttca
actcgagagggttcgttagcatcacagtatggagatcaggtgtctattctcttggcgatc
gagctcatatggaacttgtgtgaggttctgttcatcgacgcagctccagccggatctctg
ctgctcctcctgctggattgggtgcgtctgcacaagtcggacgtggacacgagagcaaga
gaggtgttacagagcgaaagccctgccctgcatcactcctactgggacgtggtaatcagt
ttggtcctgcagggccgtacggatgaagcccgtcaggtgctgtccaaacaggcatctctg
cgggccgagagcagctctgtgttcaaacgcatggacggcctgttacagaccatgcccatc
tttaaccccgcaggaactcaaacgctgactgagtttgatgtcaaatggagacactggcac
gaggagtgtgaccgctgtcttcaagacaacaccttcgctagcagccgtcagctggagacc
atctgcaagatcctggtgggtgatgaggacacgttactggagcagaaagagctgctgagc
acctggtatcacttcctggtcacacggctgctcttcactcacccgacaatcaaaccgccc
gacctgcactactacgcacaatcgagcatgaacatgtttctgggtccacgggcttctccg
gagcctctggacatcatcctgctgtcagcctttgagttcgacctgcatcaggtgatcaaa
gactgcagcattgcgctcaacaactggtggttcgtggctcatctgacagacctgctggat
cactgcaaactcctgcagtcacacaacctccattttgggtctaacctgcgtgagtttttg
gttttggagtacgcctcgggtctcttcacgcatcacagtctgtggcagctggcggtggat
tatttcgatcactgtcctgagttcggtcgtgtgtatctggagctgcagatcgagagagtc
ccgctcgacaccgaacgcaaggccattaaagtcctgcgaatctgtgaggaccgacagatg
agtgaacaggtgcgcagtatctgtaagatcatggctaaaagagctctgaggaacaacaga
ctgggatctgctctgtcctggagcatcagagccaaagacgctgcgttcgctactctcatc
tccgagaggtttcttcaggattacagtaacaaaggctctttcacagatctggatttgttg
gataatctgggtcccgccatgctgctcagtgacagactgacgtttttaggaaagtaccgt
gagtttcacaggctttacggtgagaagcgtttctccgaggcggccagactccttctgtcc
ctcatgacagcaaagatcgctccacgcagtctgtggatgaccctgctgaccgacgcgctg
cctctgctggagcagaaagaggtgatcttctcagtggatcagacgtatgagctcatgtcc
tgtctggaggagctgaacttagacagcaaagactcaaaccagacagaccaggatgaagat
atcgagtccacgaagacggagctcctgagactcgctctggcccgtaacctcgccatggcc
atcgtcaaagagggaacaatagaaacataa
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