KEGG   Carassius auratus (goldfish): 113067932
Entry
113067932         CDS       T07313                                 
Name
(RefSeq) transcription elongation factor SPT4
  KO
K15171  transcription elongation factor SPT4
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113067932
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:caua03021]
    113067932
   03019 Messenger RNA biogenesis [BR:caua03019]
    113067932
Transcription machinery [BR:caua03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     113067932
  RNA polymerase I system
     113067932
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     113067932
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 113067932
NCBI-ProteinID: XP_026096199
Ensembl: ENSCARG00000056575
UniProt: A0A6P6MIH1
LinkDB
Position
LG30F:complement(3018755..3020270)
AA seq 117 aa
MSLETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGV
IAMMSSEDSWVAKWQRIGNFKPGVYAVTVTGRLPPGVVRELKSRGVIYRSRDTAVKT
NT seq 354 nt   +upstreamnt  +downstreamnt
atgtctctggagactgtcccgaaagatctgcgtcatttgagagcgtgtctgctgtgctct
cttgtcaagaccattgatcagttcgagtacgacggatgtgataactgtgaatcatacctg
cagatgaagggcaatcgagagatggtctatgaatgcacaagctcttcttttgatggagtc
attgctatgatgagctctgaggacagttgggtggcaaaatggcaaagaatcggtaacttc
aagccaggcgtgtatgcagtgactgtaacgggtcggttacctccaggtgtggtgcgagag
ctgaagagcagaggagtcatctacagatccagagacacggctgttaaaacataa

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