Carassius auratus (goldfish): 113068007
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Entry
113068007 CDS
T07313
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113068007
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113068007
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113068007
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113068007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
CBM_4_9
EGF
NDNF_C
hEGF
Motif
Other DBs
NCBI-GeneID:
113068007
NCBI-ProteinID:
XP_026096331
Ensembl:
ENSCARG00000048810
UniProt:
A0A6P6MJY0
LinkDB
All DBs
Position
LG30F:1805796..1867733
Genome browser
AA seq
2362 aa
AA seq
DB search
MGSGGLTLSCLVLATLMTLNHAGLVKKMIRHRREALTIPGIHNVTLPTSSQPVVFNHVYN
IKVPGSSLCSVDLDSPASSDLEQKDAPSGSEVTDHTLDSSNQIVFTHRINIPKQACGCTE
GLPDLKELLNRLEMLEGELSTLREQCTTETTCCSAQATGPIGTKPYCSGRGNYSTDTCGC
ICEPGWKGPNCTVPECPGDCSDQGRCVNGKCECFDGFTGEDCSLETCRVDCGENGRCING
VCVCNEGFSGDDCTETDCLNNCLGRGRCIDSECVCDEPWTGFDCSELICPHDCYDRGRCD
NGTCYCDKGFTGEDCGTIACPNDCSGRGFCIDGHCVCIAGYSGEDCSTLTCPNDCNQRGR
CFNGVCICETGYFGEDCGKLSCPSNCNGRGRCIDGHCECDIGFQGHDCSEFSCPNNCNNR
GRCINGQCVCEEGFGGEDCSIKTCPSDCYGRGQCVDGKCICFADFTGLDCSELSCPSNCL
NRGRCIGGQCVCEEGFTGEDCSQRKCPNDCLGHGRCVEGQCICQEGFEGLDCSVHTCPGN
CNNRGRCINGKCVCDEGFAGDACGERSCPDDCNGAGQCVDGRCVCDEGHIGEDCSEVSPP
EDLTITDVTTEKVNLTWKNEMLVTEYLITYVPTSPGGLQLDFRVPGDRTSATVSELEPGI
EYLINVYAVLNNKKSVPVSARVATYLPQPEGLKFKSISDTSVEVLWDQLDFPFDAWELIF
RNTKEENGKIVNNLTPPQTNFEQPGLGPGQEYEVTLSVIKNNTRGPGTNSTVVTRIDSPG
RIDVGDVTDRSAVISWSRPVAEVDGFRVSYGPSTDPLIHRDVDLPATDTQYSLEDLKPDT
EYRVSLHSKRGDVTSKPIFESFTTSLDAPSDLKAVDQTDNSITLEWKNSRSSIDGYRIKY
GPIAGGAHGEDMFPRRAGDTTRATITGLKPGTEYGIGVTAVQNERESEPATTNALTDLDA
PRDLEVRDSTETTLELVWKRPRAKFSTYRLAFVSADGRREEVELPATTATPYTLSGLSPG
MRYTVTLVAERGRRRSAPATVTASTASFTFYLANTFPELGSAKGTDDNVISFVSLDNSEI
PFSGSGHEDPTGTLTVSNVTSEGFDLAWESHKHTGYDSYTVELKDFSGKWKEEVHLHREV
NDTKIRGLKASTEYQVRLYGISNNQRSSLLEAVAVTAPKSTSPDVVALTFKSVSTTLPSL
HKEVQPSVSTSTLLTEDFKAEASGDELTGPNQGPPGDLNLTDVSRNSLRLSWSAPEGAFD
SFIVELNSTSNKSKDSVIEMSGEARQVQVDGLNPNTLYEITLYGMKEGEKSQPVNVHIKT
EEQRPQIGSLSVSDVSWDSFNVSWTIDDGSTFDSFVIEVANSAGPERQNLSVSGDARSLW
LSGLSPDTSYIITLYRVHQGSILGSIYTQAATDSSPVVGNLYVSNITSESFSISWNGTRG
DIERFILEIIDSSWQREPVEYNLSQSTQSYEITGLRPTTDYIAYLTGVVKGRRTDSVSAV
ASTAAEPDLSGLVVSNITSDTVSLSWRTGEKAFDNFIVEVRESALPTQATGRTLPGGVRS
TVLTGLRGDTQYQIKLYATSGGSNTAALTTVVTTEPKPKLGPVVVSETRPNSLTLSWSTL
SGHLDGFAARVTDREQLYDVVELRLSGAETNVTVTGLMDSTVYDIVFYGLSRGRQTPAVS
FNTSTASLPRVENLTVSDITPYGFRVSWVADSSEGFRHFQVKVSDSGQLLEPQEFIVPGN
QTVLDVLGLITGIGYEVSVTGVSGDGLQSRPITTVAVTEAEPEIEHLFVSDVTPESFRLA
WTAEDDVFDRFVLKVRDSRKLSHPREFVVPGEERTKVLTQLLGGTEYEIELYGVTLEHRS
QPVTAVARTGLGALRDLRFSDITDTTAVVSWTVPRSQPDSYRITHIPVQGGTPMILTVDG
SQSQVSLTNLIPGEAYQVSVVAVKGLEESEPVSDTFTTALDMPRSLIAVNVTDTKALLLW
QPAVATVDGYVITYSADTVPPISEQVSGNTVDFEMSSLAPGTQYTVNVYAIRNREKSAPA
TTDFTTDVDAPRDLAASNIQTDSAVLTWTPPRAAITGYILTFQASDGDVRELNLDPSVTS
HSLSGLSSSTEHTVRLQAVAEHKRSTQISTVFTTVGMRYRNAKDCSEALLNGETSSGPYT
IYISGDEKQPIQVYCDMNTDGGGWMVFLRRQSGKVDFYRNWRNYSAGFGDTNDEFWIGLS
NLHKITSAGQYELRVDLRDGQESVFAAYDKFYIADPRSRYKIQIGAYSGTAGDSLSYHQN
RPFSTYDNDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKGINWFHWKGHEHSI
PFAEMKIRPVNFRNFEGRRKRS
NT seq
7089 nt
NT seq
+upstream
nt +downstream
nt
atgggttcaggaggcctgacactcagctgtttggttttggcaaccctgatgactctaaat
catgccggcctggtaaagaagatgatccgacaccgacgggaagctctgacgattcccggc
atacacaacgtaacccttccgacctcttcccaaccggtcgttttcaaccacgtctacaac
atcaaagttcccggtagctctttatgctcagtggatctggattctcctgccagttcagat
cttgaacagaaggatgcgccatctggctcagaagtaacagaccacacactggacagcagt
aatcagatcgtcttcacccaccgcatcaacatccccaagcaggcgtgtggctgtacagag
ggactgccggacctgaaggagctcttgaatcggctggagatgttggagggcgagttgtcg
acgctcagagagcaatgcaccacagaaaccacatgctgcagtgctcaggccacaggtcct
ataggaacgaagccttactgcagcggtcgtggaaactacagcacggacacctgcggctgc
atctgcgagcccggatggaagggccccaactgcaccgtacccgaatgtcccggagactgc
agcgaccagggccgctgtgttaacggaaaatgtgagtgttttgatggcttcacgggtgag
gactgcagcttggagacctgtcgggttgactgtggtgagaatggccgttgcattaatgga
gtgtgcgtttgcaatgaaggcttctccggagacgattgtacagagacggattgcctcaac
aactgtttgggacgcggccgctgcattgatagcgagtgtgtctgtgatgaaccctggact
ggatttgattgctccgagcttatctgtccacatgactgctacgaccgcggacgatgcgac
aacgggacttgttattgtgataaaggcttcaccggagaggactgcggcacaatcgcttgt
ccgaatgactgctcgggacgaggtttttgcattgacggccattgtgtgtgcattgccggc
tactccggcgaggattgttccaccttgacctgtccgaacgactgcaaccaaagagggcgc
tgtttcaacggcgtttgcatttgcgaaacgggttatttcggagaggactgtgggaagctc
tcctgtccaagtaactgcaatggtagagggcgctgcatcgatgggcactgcgaatgtgac
atcggattccaaggccatgattgttcggagtttagctgccccaataattgcaacaaccgt
gggcgctgcattaacgggcagtgcgtttgcgaagagggattcggcggtgaggactgcagc
atcaaaacctgcccgtcggactgctatggccgaggccagtgcgtggacggaaagtgcatt
tgctttgcggacttcaccggcctagactgcagtgaactgagctgcccaagcaactgcctg
aaccgtggacgctgcatcgggggacagtgcgtttgtgaagaaggctttaccggagaggac
tgcagtcagaggaagtgtcccaacgactgtctcggccacggacgctgcgtggagggacag
tgcatttgccaggagggttttgagggcctggattgctccgttcacacctgtcctgggaac
tgcaataaccgtggacgctgcatcaatgggaaatgtgtgtgcgacgagggatttgctgga
gacgcctgtggagaaagaagctgtccagatgactgcaatggtgcggggcaatgtgtggac
ggccgctgcgtgtgtgatgaaggccacattggcgaggattgctcagaagtctcaccaccg
gaagacctgaccatcacggatgtgaccacggagaaggtgaacctcacatggaagaacgag
atgctggtgacggagtatttgattacgtatgtcccgacgtcaccaggcggcctgcagctc
gacttccgtgttcctggagatcgtacgtctgccaccgtctctgagcttgagccaggaatt
gagtatctcatcaatgtttatgccgtcctcaacaacaagaagagcgttcctgtcagtgcc
agagtggccacatatctcccgcagcccgagggcctgaagtttaagtccatcagtgataca
tctgtggaggttttgtgggaccagctggactttccgttcgacgcctgggagctcatcttc
cgtaacacaaaggaagaaaatgggaagatagtgaacaatctgacacctccccagaccaac
tttgagcagccgggactcgggccgggacaggagtatgaagtgactttgtcggtcataaag
aacaacaccagaggacccggaacaaactcaactgtagtaacaagaatcgattctccaggg
cggattgatgttggcgatgtgacagaccggtctgcagtgatctcctggtccaggcccgtg
gctgaggtggacgggttcagggtatcgtacggaccgagcacagatccgttaatccatcga
gatgtcgacctcccggccacagacacgcagtacagcctggaagacctgaaaccagacact
gaatacagagtgtctctccattcaaagaggggagacgtgaccagcaagcccatctttgag
agtttcaccacgagtctggatgccccctctgacctcaaagctgttgatcagactgacaac
agcatcacactggaatggaaaaacagccgctcatccatcgatggataccgtatcaaatac
ggtccgatcgcaggaggtgctcatggtgaagacatgttccccagaagagctggagacacg
acacgggccacgatcacaggcctgaagcctggaacggagtacggtattggagtcacagcc
gttcagaatgaaagagagagtgagccagcgaccaccaacgcactgaccgatctggatgcg
ccacgagacctggaagtgcgagactccaccgaaaccaccctggaactggtctggaagagg
cccagggccaagttctccacctacaggctagcattcgtctctgccgacggtcgacgggaa
gaagtggagctgcctgctaccacagctacaccctacaccctgagcggcttgagccctggc
atgcgctacaccgtcacccttgtggcagaacgtgggcggaggagaagtgctcctgccacc
gtcaccgcctccacagcatctttcactttttatctagcgaacacatttcctgagctcggt
tcagccaaaggcaccgatgacaatgtcattagctttgtgtctctcgacaactcagagatc
ccgttctctgggagcggacacgaggatcccactggcaccttgaccgtgtctaatgtcaca
tctgaaggatttgatcttgcgtgggagtcacataaacacactggctatgatagttacact
gtagaacttaaagatttctcagggaaatggaaggaggaggttcatctccacagggaggtg
aatgacactaaaatccgtggcctaaaggcttccacggagtaccaagtaaggctttatgga
atatccaataaccaaagatcttcactgctagaagcagttgcagttacagcaccaaagtct
acctctcctgatgttgttgctttgaccttcaaaagcgtttcaacaacactaccaagcctc
cataaggaggtccagccatcagtgtctacctccactcttttaacagaggattttaaagct
gaagcctcaggtgatgaactcacgggcccgaatcaagggcctccgggtgacctaaacctc
actgatgtgagcaggaatagtttgaggctgtcttggtcagctcctgaaggagccttcgat
agcttcatcgttgagttgaactcaacatcaaataagtccaaagacagtgttattgaaatg
tctggagaagccaggcaggtccaagtagatggactgaaccctaatacgctttatgagatt
acattgtatgggatgaaggagggcgagaaatcccaaccagtcaatgttcacatcaagaca
gaggagcagaggccgcagattggcagtctgagtgtgtctgatgtgtcttgggatagcttc
aatgtgtcctggaccattgatgatggctctacctttgacagttttgtgattgaagtggca
aattcagcaggtccagaaagacagaacctttcggtatctggtgatgcacgtagtttatgg
ctgtctggactcagtcccgacacgtcctatataattacgttatacagagtgcatcagggc
tcgatcctggggtcgatctacactcaagcagctacagatagctctccagtggttggcaat
ctgtatgtttctaatattacatcagagagcttctccatttcatggaacggcacgagagga
gatattgagaggtttatcctggagattatagactctagctggcagcgggagccagtcgaa
tataatctgtcacaaagcacacagtcgtatgaaatcactgggctacggccgactactgac
tatatagcttacctcactggagtcgtgaagggaaggagaacagactccgtcagtgctgtc
gcctccacagcggccgagcctgacttgtctgggctagttgtttcaaacattacctcagac
acagtgtcgctctcctggcggacgggagagaaggcgtttgataattttatagtcgaggtg
agagagtctgctttgcccacgcaggcgacggggcgcaccttgcccggaggtgttcgctcc
acggtactgaccggcctcagaggagacacacaatatcagatcaagctgtacgccacctct
ggtggctcaaacacagctgccctgacgactgtagtgaccacagagccaaagcctaaattg
ggccctgttgtggtgtctgaaacacggccgaatagcttgacgctgtcctggagcacactg
tcaggccacttggatggctttgctgctcgtgtcactgaccgtgagcagctgtatgatgtt
gttgagctcaggctgtcaggtgcagagacgaacgttactgtcacgggtcttatggactct
acggtttatgatatagtgttttatggtctgtctcgtggccgtcaaactccagcagtttcc
ttcaataccagtacagcgtcattacctagagtggaaaatctcaccgtttcggatattacc
ccgtacggatttcgggtgtcctgggtggcagattcctccgagggcttcaggcattttcag
gtaaaggtgtcagactctggtcagctgctggagccgcaagagttcatagtgccggggaac
cagaccgtactggatgttttgggcctgatcactggcattggctatgaggtcagtgtgacc
ggggtgtcaggggatgggttacagtctcgaccaatcaccacagtggctgttacagaggca
gaaccagagatcgagcaccttttcgtgtcagacgtcacccctgagagtttccggctggcc
tggacggcagaagacgacgtctttgatcgattcgttctcaaagttagagattcgagaaag
ctctcccaccctcgagagttcgttgtgccgggcgaagaaagaaccaaagttttaacgcag
cttttggggggaactgagtatgaaattgagctttacggtgtcacgctggaacatcgctcc
caacccgttactgctgttgccagaacaggccttggagctctacgggaccttcgtttctct
gatatcacggacacaaccgctgtggtttcctggactgtaccgcgatcccagccggactcc
tacagaatcactcacatcccagtccaaggaggtactcccatgatcctgacagtggacggg
tcacagtctcaggtttccctgacaaatctgatccccggagaggcatatcaagtgtcggtt
gttgcagtgaaaggccttgaggagagcgaaccagtgtccgacacttttacaacagccctg
gatatgccacgcagtctgattgctgtcaatgtcactgacacaaaggcgctgttgctgtgg
caacctgccgtggcgaccgtggatggatatgtgatcacatacagcgcagacactgtgcca
cccatatcagagcaggtttctggaaacacggtggactttgagatgagctcactggctcca
ggaactcagtacactgtcaatgtttacgccattagaaaccgagagaaaagtgctccagcg
accacagacttcaccacagatgtggatgctccgcgtgatctggctgccagtaatattcag
acagacagtgccgttctcacctggacgccgccgcgggccgccatcactggatatatcctg
acctttcaagcgtctgacggcgatgtcagggagctgaatctggatccgtctgtgacctca
cacagtctgtctggtctgagcagcagcactgaacacacagtcagactgcaggccgtcgct
gagcacaagaggagcacacagatcagcaccgtcttcaccacagttggcatgcggtacagg
aacgccaaggattgttccgaagctctgctgaacggagagacgtcctccgggccgtacacc
atttacatcagcggagacgagaagcagcccatccaggtttactgtgacatgaacactgac
ggtgggggctggatggtgttcctgcggcgtcagagcggcaaagtggatttctacaggaac
tggaggaactactctgcaggattcggtgacacgaatgatgagttctggatcgggctttca
aatcttcacaaaatcacctcagccggtcagtacgagctgcgcgtggacctgcgtgacgga
caggagagtgtgtttgctgcctacgataaattttacatcgcagatcctcgttcccgctac
aagatccagattggtgcatacagtggtaccgcaggtgattccttgtcgtatcaccagaac
aggcccttctccacctatgacaatgacaatgacattgcggtcaccaactgtgccctgtcc
tacaagggagcgttctggtataaaaactgccatcgagtgaacctgatggggaaatatgga
gacagcagtcacagcaaaggcatcaactggttccactggaaaggccacgagcattcgatt
cctttcgcggagatgaagatccggccagtcaatttcagaaactttgaaggcagacggaaa
agatcatag
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integrated database retrieval system
