Carassius auratus (goldfish): 113068053
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Entry
113068053 CDS
T07313
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43-like isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113068053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113068053
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113068053
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113068053
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
FANCL_C
zf-C3HC4_3
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
113068053
NCBI-ProteinID:
XP_026096407
Ensembl:
ENSCARG00000056611
UniProt:
A0A6P6MIW8
LinkDB
All DBs
Position
LG30F:3027339..3111937
Genome browser
AA seq
849 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAASQVALGHTGLELAAAVESERSAPRAMIKVSLLKQEPTSRPI
TLEGVFAGGSAGYAEGKLMQSHPLSLCNTSEDDRQETFFISIVKLESPESKVPQCLPLLD
KARLALQRGAQAVIFDITDDPGAAQELRDSGLLPRPVVLVKSSDAEQLMGLVNKNEEAKV
FIDIMMETQKWPHYDVGILLTVSLVVLAIIMIFALRFRCKSNRTWDSMHQQTLRAISRLE
TRTYCSQSCSGSQRSRGAPGSNSSSNSSPICAICLEEFMDGQELRIISCAHEFHKECVDP
WLLQHRTCPLCMHNIMGKQPQGSDLASHQPQRSQMPPPRPEHSQAFLLSHNYSNQHPYPQ
HHVPFSLRHHYPHNPSGPLPQLDNYGNSPPLHPRTLHCFPSRPLGASCAYHLAPDAHHGR
LQRTGGHGFRTGHAAPRRSCQRCPGGPLRNSSGSRMHHVVSPANHATHHHLPRGGGSHSR
QDDGSASGGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRS
SLSSDYDPFIYCGPGKAPRRGSIEATQRPRSLDSVVNRTGGGSAGDAGAICLEEQQQQVA
VFSHVHYHRHRHHYYEDGELSQGPGRGYDEDQGATSSATAASGPCLITKDKDSSGCQVQV
QSCHCPKTDLSSRRVEDRDLDPVTSSGASVILPSPPLNSPSPPCCHKGPGWTTGRKAAGR
PMEVPSPVVHFHQSMDLQDDCSIHIHYGQGAGSYCCTPPPDMAPTLLPVPLILDSTGMTD
WPCCSGAHVVWQKEVQQAHSEPQLLGPTSGMDRPLCRTHHGPGDELPMDICLYCQTLHNS
QGSEEESGV
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagggtccctgtgcggcgactggccgggctctggccgtggctgctcatggctgcctcg
caggtggctctgggtcacacgggcctggaactagctgctgctgtggagtccgagcgctcc
gcaccccgagccatgatcaaggtgtctctgctgaagcaggagcccaccagcaggcccatc
accctagaaggggtgttcgccgggggcagcgcaggctatgctgaagggaaactgatgcag
tctcatccactgtctctgtgtaacaccagtgaagatgaccgtcaggagaccttcttcatc
agcatcgtcaaactcgagagtccagagagcaaagtgccgcagtgcctgccgctgctggat
aaagctcgtctggctcttcagagaggcgctcaggcggtcatctttgacatcacagatgat
cctggagctgctcaggagctgcgtgattcaggtttgttgcctcgtccagtggtgctggtg
aagtcatcagatgcagaacaactgatgggactcgtcaataaaaatgaagaagccaaggtg
ttcatagatatcatgatggagactcaaaaatggcctcattatgatgttggcatcctgttg
actgtgtctctggttgtgttggccatcatcatgatctttgctctacgcttccgctgcaag
tccaacagaacctgggactctatgcaccagcagaccttgcgtgccatcagcaggttggaa
acgcgcacatattgttctcagagttgctctggctcccagcgctctcgtggggctccaggg
tcaaacagcagctccaattccagtccaatctgtgccatctgtcttgaggaattcatggat
ggccaggaattgagaatcatctcctgtgctcatgagttccataaggagtgtgtcgaccca
tggctcctacaacaccgtacctgcccactgtgcatgcacaacatcatgggtaaacagcct
cagggttcagatctggcatcccatcagccccaaagaagtcaaatgccaccccctcgacct
gagcacagtcaagccttcctcctttcccataactattcaaaccaacacccttatccccag
caccatgttcctttttccctgcggcatcattacccccataatccctctggacctttaccc
caattggacaactatggcaactctccccctcttcatccacggactcttcattgctttccc
agcagaccactgggtgctagctgtgcgtaccacttggctccagatgcccatcatggacgt
ctgcaaaggacaggtgggcacgggtttcggaccgggcatgcagctcccagaaggtcgtgt
cagcggtgtcctggaggacctttgcggaactcttcaggttctcggatgcatcatgtggta
tcgcctgcaaaccatgcaactcatcatcatctgccacgtggaggaggctcacacagtcgc
caggatgacggcagcgcctcgggagggagttaccatacggagcgtagcggttaccttgca
gacggaccagccagtgattccagctcgggatcgtgccatggctcgtccagtgactccgta
ttgaactgtacggacatcagcctgcagggtgtctatggcagctggtccacttttcgtagc
tcgctcagcagcgattacgacccgtttatctactgcggaccaggcaaagctccacgcaga
gggagcatagaggccacgcaaaggcctcgttccctggactctgtagtgaaccgaaccggt
ggtggaagcgctggtgatgccggtgccatttgcctggaagaacagcagcaacaggtggct
gtgtttagtcacgttcactatcacaggcatagacaccactattacgaggatggggaactc
agtcaagggcccggccgaggctatgacgaggatcaaggagccacgtcctcagccacagca
gcaagcgggccttgtctcataactaaagacaaagactcctccgggtgtcaggtacaggta
cagtcttgccactgccccaaaacagacctcagttcaaggagggttgaggatagagacctg
gaccctgttacctcctcaggtgcctccgtaatccttccgtctcctcctttaaactctccg
tccccaccctgttgccacaaaggcccagggtggacgaccggtcggaaagcagctggacgt
ccaatggaagtgccttcgccagttgttcactttcatcaaagcatggaccttcaggatgat
tgtagcattcatatacactacggacagggagcgggaagctattgctgcacacctccgcca
gacatggcccccacgctactgccagtgcccctgatcttggactcgacgggtatgaccgac
tggccgtgctgtagtggggcacatgtggtgtggcagaaggaggtgcagcaggcccattca
gagcctcagctcctgggacccacttctggaatggacagacccctgtgtaggacccatcat
ggcccaggggacgaacttcccatggacatctgtctgtactgccaaactctacacaatagt
caggggtcagaggaagagtctggtgtttga
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