Carassius auratus (goldfish): 113068142
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Entry
113068142 CDS
T07313
Name
(RefSeq) serine/arginine-rich splicing factor 6-like
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113068142
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113068142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113068142
Spliceosome [BR:
caua03041
]
Common components
Common spliceosomal components
SR proteins
113068142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
113068142
NCBI-ProteinID:
XP_026096567
Ensembl:
ENSCARG00000062227
UniProt:
A0A6P6MJC9
LinkDB
All DBs
Position
LG36F:complement(1238355..1244121)
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AA seq
376 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDTRDADDAVYELNGKDL
CGERVIVEHARGPRRDRDGYGGGYGGSSSRSSSGYSSRSRSGREKYGPPVRTEYRLIVEN
LSSRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSYSDMKRALDKLDGTDINGRKI
RLVEDKPRRRRSYSGSRSRSRSRRRSRSRSRRSSQSRSRSRSRSRSRSKHRSRSRSGRKS
RSRSRRKSHSKSPTKSRSRKSKSRSRSRTQKSRSRSPSHKSRSRSDARKSRSKSRSKAKS
ERDSRSRSKEKSVSRKSRSRSASPRENGNGDRAKSTSRSPSPKEDRRQSESPGKRSASRS
PSRSKSRSRSRSASQD
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgagtgtacatcggcaggctgagttatcatgtgcgagaaaaggacatacagcgt
tttttcagcggctacgggaagcttttagaaatcgatctgaagaacgggtatgggtttgtg
gagtttgaggacacgcgtgacgcagacgatgctgtgtacgagctgaacggtaaagatctg
tgcggggagcgtgtgatcgtggagcacgccagaggaccgcggcgggaccgggatggatat
ggtgggggttatgggggcagcagcagccgcagcagtagtggttatagcagcaggagccga
agcggaagagagaaatatggaccaccggttcgcacggagtaccgtctgatcgtggagaac
ctgtccagtcgctgcagctggcaggatctcaaggacttcatgcgtcaagctggagaggtg
acctatgctgacgcccacaaagaaagaaccaatgagggtgtcatcgagtttcgctcttac
tccgatatgaagagagctttggacaagttggatggcactgatatcaacggaagaaaaatc
cgtcttgtggaggacaagcctagacgacgtcgctcctactctgggagcaggtcaaggtct
cgcagccgacgccgttctcgcagcaggagccgccgaagctcacaaagccgttccaggtcc
agatctcgctcaaggtcccgcagcaagcaccgctctcgttccaggtctggtcgcaagtcc
cgctccaggtctaggagaaagtctcactcaaagtccccaacaaagtcccgctccaggaag
tcaaagtctcgttcccgctcgcgtacgcagaagtcacgcagtcgctcccccagccacaag
tctcgctcccgctccgatgcccgcaaatctcgctctaagagccgctccaaagccaagtcg
gagagggattccaggagccgctcgaaggagaagtccgtcagtaggaagtcccgaagccgc
tcggcttctccaagggagaatggaaatggagaccgggccaagtccacctcccgctcgccg
tcccctaaagaggaccgccgtcagtccgagtctcctgggaagcgttctgcgtctcgctct
ccatcacgttcgaagtctcgttcccgctctcgatctgcttctcaagactag
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