Carassius auratus (goldfish): 113068341
Help
Entry
113068341 CDS
T07313
Name
(RefSeq) zinc finger BED domain-containing protein 1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113068341
04121 Ubiquitin system [BR:
caua04121
]
113068341
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
113068341
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
113068341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
GLE1
Motif
Other DBs
NCBI-GeneID:
113068341
NCBI-ProteinID:
XP_026096844
UniProt:
A0A6P6MKC8
LinkDB
All DBs
Position
LG44F:3680954..3683282
Genome browser
AA seq
594 aa
AA seq
DB search
MQTEVICKTCKSRVATKTGNTSNLFSHLKAKHNDLYQLCSAEKSSSSGESTLVHQPKQQS
ISSSFESITPYPVSSRRHREITEAITRYLAKDMVPIATVGKPGFLHLMNTIDKRYNIPSR
TYFSRIAIPQMYEHTRDRVMLELRDVEHFACTTDLWSSRTTEPYISLTVHFIDKAFKMRS
LCLQTAYFPSEHSGENIALGLREALSGWNLNEARLVCFTTDNATNMIKAAEINGWPRLQC
FGHRLHLAIENAVKCDTRISRALGVCKKLVGHFSHSWKKKEALKKAQRELNLPEHGLITE
CPTRWGTKQQMMERILEQQRALSQVLSENRSTRHLVPSWQDIEVLESVNKALKPLQDFTD
ALSGEEYVSISCLLPVLRLLNTQTLAADEEDTELTCSIKTKVLGYMEVKYEDPATQTLFN
ISTFLDPRFKKDYIPKEQREEISLRIKSEMKEAQPAVAISSSSVGAAVSGAEAEPCQSAT
ATSTKRMKKSLGSLLQTSVTSPSESSDHATIEAEFNSYILIPKIHSEQDPLAWWGIHKVN
FPHLSKLAEKYLCVPATSTPSERLFSTPGNVVTCQRASLKPNKVDMLVFLSKNL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgaagttatatgtaaaacatgtaaatctcgtgtagcaacgaaaacgggaaac
acttcaaatctgttcagtcacctcaaagcaaagcacaacgatttgtatcagctatgctct
gcagaaaaatcttcaagctcaggtgaatcaaccctcgttcaccaacccaagcaacaatcc
atatcatcaagcttcgaaagcataacaccatatcctgtaagttcccgccgtcatagagag
ataaccgaggccattacacgctatctggcaaaggatatggttccgattgccacagtcggg
aaaccagggtttttgcacctgatgaataccatcgacaaacggtacaacattccctctcga
acctatttttcacgcattgctatcccccaaatgtacgagcatactcgcgaccgtgtcatg
ttggaactgagagatgtcgaacattttgcgtgtacaacggacctctggtccagtaggaca
acagagccgtacattagtttaacggttcactttattgacaaagcctttaagatgagaagt
ctgtgcttacagacagcatatttccccagtgaacacagtggggaaaacatagcgctggga
ctgcgagaggctttgtctggctggaatttgaatgaggcgcgtctagtgtgttttaccact
gacaacgcaaccaatatgatcaaagcggcggaaataaatggttggccccgactacagtgc
ttcgggcacagactgcaccttgctattgaaaatgcagtcaaatgtgacacacgcatcagt
cgtgctctaggagtgtgcaaaaagctagtgggacatttttcccatagctggaaaaagaaa
gaagcgctaaagaaagcacagagagagcttaacctgccagaacatggtctgatcacagag
tgccctacacgatggggcactaagcaacaaatgatggaaaggatcctggaacagcagagg
gctctgtcacaagttctctctgaaaatcggagtacaagacatctggttccatcttggcag
gacattgaggtccttgagtccgtaaacaaggcattgaagccacttcaagattttacagat
gctttgtctggggaagaatacgtgagcatttcctgtctacttccagttcttcgtttactg
aacacacaaacccttgctgctgacgaggaagacacagagctgacatgctcaattaaaacc
aaagtgctgggctacatggaggtaaaatatgaggatcctgcaacccaaactctctttaac
atttccacttttttagatccaaggttcaaaaaagactacattcctaaggaacaacgggaa
gaaattagtttaaggataaaatcagaaatgaaggaggcacaacctgctgttgccatatca
tcatcatcagtgggtgctgctgtgtcaggtgctgaggctgagccatgtcaaagtgccaca
gccacaagtacaaagaggatgaagaagtctttaggaagtctcttacagacctcagtcaca
tctccctctgaatcctctgaccatgcaaccattgaagcagaatttaacagctacattctg
atccccaaaatccacagtgagcaggaccctttggcatggtggggaattcacaaggtaaat
ttcccccacttaagcaagctggcggaaaaatatctttgtgtgcctgccactagcacacca
tctgaaagacttttcagcacaccaggcaatgtagttacatgtcagcgtgcatccctgaaa
ccaaacaaagtggacatgctggttttcttgtccaaaaatctttaa
DBGET
integrated database retrieval system
