Carassius auratus (goldfish): 113068354
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Entry
113068354 CDS
T07313
Name
(RefSeq) thyroid hormone receptor beta-like isoform X1
KO
K08362
thyroid hormone receptor beta
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04080
Neuroactive ligand-receptor interaction
caua04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113068354
04081 Hormone signaling
113068354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113068354
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
caua03310
]
113068354
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
113068354
Nuclear receptors [BR:
caua03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
113068354
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CpXC
Motif
Other DBs
NCBI-GeneID:
113068354
NCBI-ProteinID:
XP_026096863
Ensembl:
ENSCARG00000024473
UniProt:
A0A6P6MKD6
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All DBs
Position
LG44F:complement(4146725..4221164)
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AA seq
415 aa
AA seq
DB search
MSEQGDKCTSRWKDDPMQNGYVPSYLDKDELCVVCGDKATGYHYRCITCEGCKGFFRRTI
QKNLNPTYACKYEGKCVIDKVTRNQCQECRFKKCIAVGMATDLVLDDSKRLAKRKLIEEN
RERRRREEQQKTVWERPEPTQEEWELIRGVTEAHMATNAQGNHWKQKRKFLVEEAMLLNE
ITCNLFCTSDQSAVGVKEAKPEDIGSAPIINAPEGSKVDIEAFSQFTKIITPAITRVVDF
AKKLPMFCELPCEDQIILLKGCCMEIMSLRAAVRYDPESETLTLNGEMAVTRGQLKNGGL
GVVSDAIFDLGVSLSSFNLDDSEVALLQAVILLSSDRPGLTSVERIERCQEEFLLAFEHY
INYRKHKVAHFWPKLLMKVTDLRMIGACHASRFLHMKVECPTELFPPLFLEVFED
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcaaggagacaaatgcacctcccgctggaaagatgatcccatgcagaatggg
tacgtaccaagttatctggacaaggatgagctgtgtgttgtgtgtggggacaaagcgact
ggatatcattaccgctgcattacctgtgagggctgcaaaggtttttttcgccgcacaatt
cagaagaacttgaaccccacatatgcgtgcaagtacgagggcaagtgcgtcattgacaaa
gtcacccgcaaccagtgccaagagtgtcgcttcaagaaatgcatcgctgttggcatggca
acagacttggtgttggatgacagtaagcgtctggccaagcggaagctgatcgaggagaac
cgtgagcggcggcggcgcgaggagcagcagaagacggtttgggagcgacccgagcccacg
caggaggagtgggagctgatccggggcgtcaccgaggcccatatggccacaaacgcccaa
ggcaaccactggaaacagaagcgcaaattcctggtcgaggaagcaatgctacttaatgaa
ataacatgtaatttattctgtacttctgaccagagtgcagtgggggtgaaggaagccaag
cccgaggacattggttctgcacccatcatcaacgcaccagaggggagcaaagtggacatc
gaagccttcagtcagtttacaaaaattatcacccccgccatcactcgtgttgtggatttt
gccaaaaagctgcccatgttctgtgagctgccttgtgaggaccagatcattttgctgaag
ggctgctgtatggagatcatgtccctgcgagcggcggtgcgttacgatccagagagtgaa
accctgacgctgaacggggagatggcagtcacacggggccagctcaagaacgggggtctg
ggcgtggtctccgatgccatctttgatctgggcgtctcgctgtcatccttcaacttggat
gattcggaggtggcattgctacaagccgtgattctgctttcctccgatcgtccaggttta
acgagcgttgaacggatagagcgctgtcaggaggagttccttttggccttcgaacattat
atcaactaccgcaagcacaaggtggctcacttctggcctaagctgctgatgaaggtgaca
gatctgcgcatgatcggtgcctgccatgccagccgcttcctgcacatgaaggtggagtgt
cccacggagctctttccgcccctcttcctggaagtgttcgaagactga
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