Carassius auratus (goldfish): 113069060
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Entry
113069060 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: focadhesin-like
KO
K27498
focadhesin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113069060
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
113069060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
HEAT
Motif
Other DBs
NCBI-GeneID:
113069060
NCBI-ProteinID:
XP_026097818
Ensembl:
ENSCARG00000062726
UniProt:
A0A6P6MN41
LinkDB
All DBs
Position
Unknown
AA seq
1807 aa
AA seq
DB search
MTEILKSRFEFPSSLIQAQAVRTLVTAVLKEKGQNERICQTTAKGQALESLWEQCSSDST
VVRSACCDALVLLVEQGHADLPYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASQRDNGA
SFTCPYSIRTFPHPYITVLENRPDCWPALLQEIDDFLQLAMDKDEPVYVKMLVPFLRYLY
CEPQRLSENALLRHSLLRVLLQPRGVPEPDSLQEKGASGTRVVRELIQSLFDLLPYMLVD
SVTAVVEFSSFAESLTSALLIDPGFWRKELTQLTLQLLCACQLSLHLGGELMSLLHTLHQ
IIPAHAEELPPEQVIMGISLLLLSASTSQQTALLELAVKIVPPELPPPWGASLLVMPLLQ
VLSCSSLMEALTDTQTHTKNLELTNSLLQRVQREASDRKEDSTQLSLPLSTWYSELQVAT
SVLHRISVDSIASMEWLYSLQSSLSVCEHVPDSVCLLVSHVIVSSHGDLCRLALDTAAAI
AEADPAKVPCFLPVLMFKLGRVSDPALSHSVLYTLPKLGTHKFCIPQVLHVLQTLGSSSR
LRPVALRLLALLWKKQDRVYPDLQRLMSQLEKSSVVLGKDTQWEQILARAACIRDICRER
PYQHGGDMLAAISDTLMQFSRKDQATPAALALQGLQELCRAEVVDIISTWKALSPKLCCD
TRPLVLKATAELLALVPTLNVKTEEYEKFRNEAVCVLWGYALSQDPEVASPGFKALSEYP
EPSHTILHLPEQIRPVPKQPEEEDEGKENENEKEEDVSVPGTSYVKLVRLTPRSVLPALE
TFLTALVRQEMNQMPRGVYHSALIGVNLRSDQGKTVSGIPSFMLKTYEKNKQPGLKPGLA
AGLLLCYDLPVQTDKDGHPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQAWR
GFMSRAYHAALKGRKAELEMLQKQGKESPEELQYKQHYAWLWVRDQLTDVVKSAAKDSPV
VQGNSILALSGLAVVLTRYESNLPTQSESGLEVGPDFLPTVHWLTMVIDTLLSIVSSNSN
PKAQVFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVTSCKKNIPAILGTLEAGLPG
SPSADESQALQFHSGLALGMFLAWLHDERVSDISGQSVAELLVKHLERLEDCCFNPNLEY
NAGCVLGVGLVLSSLSSSSQSERDGVHVSLTLDRLLQSLQDSSNMSRMQQEVLAYSVACV
AVSAFSAGIIEASKAEESMNTLRTLTEESQQTPGFALALGLTVFGLSSFGHGKAVDIQPR
LLAAWTKILLAEGCPTMQRLSALNGLIALVGSEMALIQMKSESEESSQQQSRLNEVIRAI
TQIITFSGTIGLQSNGACLLGHLHLAHMSSSHSRTAVPQDFGYLPEKSVIRASVDFITEA
GRKGPEFTPPHLVKTVLAALVTVGGSFQYPPVNWSAILSPLMRLGFGEEVQHHCLALAAS
QAQSSQSAALFLGIWLVPPLVHSLSMHSRASLYECLNSWMKHVAEDKLQVYVDSLAVQQF
VPDTRPQRLSLCLSILRGLSKAMAVPNPPQNCWTALCSTTEKIYNLLPDNIPAGEVHLYE
AMCSCLSELSDTEIDRILKVTEANVEKTAFILCYLTSKGRVPLLGLNDVISTILQVGNKK
RISWLLLQALHQSRFASSPSTGVSKRMEWLLELMGHIRNVAYGSPSVKCVSVIEGTDFLL
GVFAAAVVSWADHCAPLLIGIRAQWFPWEQSSLTTDLSHDLCVNPAITELSVASCLLAIP
CSMKKLLCKEPWKSQSQKFIDWLFSITEGPKLGFSETALLTAKATLMALRSSSEFKKKGV
WTRAYGW
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaattttgaagagcaggtttgagttccccagctccctcattcaagcccaggct
gtgaggacgctggtcactgcggtgctgaaagagaaaggccagaatgaaaggatttgtcag
acaaccgctaaaggtcaagcgctggagtctctgtgggagcagtgcagcagtgacagtact
gtcgtccgctcggcctgctgtgacgctctggtgctgcttgtagaacagggacatgcagat
ctgccatatgtgctcaacaccacccttaacctcctgccctcggcacggaatgttcaaggg
ctgatcaaagtggttgggaggctgctacagatccaggcaagtcagcgggataacggagca
agcttcacctgtccatactcaattaggaccttccctcacccctacattacagtgctggaa
aaccgccctgactgctggcctgctctgctccaggaaattgatgacttccttcagctggct
atggacaaagatgagccagtatatgtgaaaatgctggttccgttccttcgttacctgtac
tgcgagccccagaggttgtcagaaaacgctctgcttcgacacagcctcctcagggtcctg
ctccaacctcgaggggttcctgagcctgacagcctgcaggaaaagggggcgtctggcact
cgggtggtccgtgagctaatacagagtctctttgacctgcttccatacatgctggtggac
agtgttaccgcagtggttgagttcagctcatttgctgaatctctgacatcagctctgctc
atcgatccaggcttctggaggaaggaactgactcagctgacacttcagctcctgtgtgcc
tgtcagctgagtcttcatctgggaggagaactgatgtctctccttcacacactccaccag
ataatacctgcacatgcagaggaactcccgcctgagcaagtgatcatgggaatctccctg
ctactgctaagtgcctccacctctcaacaaactgccctcctagagctcgctgtaaagatt
gtccctcctgagcttccacctccttggggtgcatctttgctggtgatgcccttgttacag
gtgctgtcctgctccagcctcatggaagccctgacagacacacagacacacacaaagaac
cttgaactgaccaattcactgttgcaaagggttcaaagagaggcctcagatcgaaaagag
gactccacacagctgagtttgcctctcagcacttggtacagcgagcttcaagtggccacc
agcgtcctgcaccgaatttccgtagactccattgcatccatggaatggctttactccctg
cagtcatcactctctgtctgtgaacacgtcccagatagtgtttgtctcctggtgtcccat
gttatcgtcagcagtcacggggatctctgcaggttagcgctggacactgctgctgccatc
gccgaggccgaccctgctaaggtgccatgtttcctccccgtcctgatgtttaaactgggc
agagtctctgatccggctttgtctcactctgttctctacactctgccaaaactgggaacc
cacaagttctgtatcccgcaggtgcttcatgtcctccaaactctgggcagttcatccaga
ctgaggcctgtggcgctgcgcctcttagctcttttatggaaaaaacaggaccgtgtgtat
ccggacctgcagagactgatgtcacagcttgaaaaatcatcagtggtcttgggaaaagat
acgcagtgggagcagatattggctagagcagcctgcatcagagacatctgcagagagagg
ccgtaccaacatggaggagacatgctggctgccatcagcgacacactgatgcagttctcc
aggaaggaccaggccacccctgctgctctggcactgcagggcttacaggagctctgtaga
gctgaggtagtggatatcatctccacgtggaaggccctctctcctaagctgtgctgtgac
accagacccctggtcctaaaggccacagctgaacttctggcattagtacctactttaaac
gtcaaaactgaagaatatgagaagttcagaaacgaggcagtctgtgttttatggggctac
gcacttagtcaggacccagaggttgcaagcccgggttttaaagctctctcggagtaccct
gaaccgtctcacaccatcctacacttgccagagcagatcagacctgtaccaaagcagcct
gaagaagaggatgaagggaaggagaatgagaacgagaaggaggaagatgtttcagtgcca
gggacgtcatacgtgaagctagttcgtctcacaccacgatctgttttaccagcccttgag
accttcctaacggctctagtacggcaggagatgaaccaaatgccccgtggcgtgtaccat
tcagctctgattggggtgaatttgcgctctgaccagggaaaaactgtatctggaattcct
tcttttatgctgaaaacatatgagaagaacaagcagcccggtctgaaacctggcttagca
gctgggcttctactctgttatgaccttcctgttcaaactgacaaagatggacatccaatc
acgcgatttcttgtcagcagagggcggagttatcaacaaatgttagccacccttattcat
gaggtgaacatccagccgtctgaatggcatcgttctctgctcttgccccaggcctggcgg
ggcttcatgagccgggcttaccatgcagctctcaagggtcgaaaggcagagctggagatg
cttcagaagcagggtaaagagagcccagaggaactgcagtacaaacagcactatgcctgg
ctctgggtcagagaccaactgacggatgtggtcaaatctgccgccaaagatagtccagtt
gttcaaggtaattctatcctggcactaagtggcctggctgttgttttaaccagatatgag
agcaacctccctacacagtctgaaagtggacttgaggtgggtccggacttccttcccaca
gttcactggctgacgatggtgattgacacactgctcagcattgttagcagtaacagtaac
cctaaagcacaagtcttcccatggttcattcatcgctcatactcgggtgagaacacagcg
agtgtgatcgcgcgctcctgtgctgctctggggctggcgttgttggtgccggtgctggtg
acctcgtgcaaaaagaacattcctgctatactgggcaccctagaggcgggactgccaggc
tcgccctccgcagacgagtctcaggcactccagtttcacagcggcctggctctgggcatg
tttctagcctggctgcatgacgagagagtcagtgatatatctgggcagtcggtagcagag
ttgctagtgaaacatctggaacgactggaagactgttgctttaatcccaatctggagtac
aatgctggttgtgtgttaggtgtggggttggtactcagttctctcagtagcagtagtcag
tctgagcgggacggtgtgcatgtgtctctaacgctggacagactcctgcagagcctgcag
gacagcagcaatatgagccgcatgcagcaggaggttttggcctattctgtggcgtgtgtt
gcagtttcagcatttagtgcaggcattattgaggccagcaaggctgaggaaagcatgaac
acactgcgcactctgacagaggaaagccaacagacaccaggctttgctttggcattgggt
ctcacagtgtttggactctcttcttttggtcatggtaaagcagtagacatccagcctcgt
ctgctggctgcttggaccaagatactgctggcagagggttgtcccacaatgcagaggctg
tctgccctcaatggactgatcgcattagtgggatcagagatggctctcattcagatgaag
agtgaatctgaggagtcctcacagcagcagagcagactgaacgaggtcatccgagccatt
acacagatcatcactttttcaggaacaataggtctgcagtctaacggagcatgtctgctt
ggacacctgcatctggcccacatgtccagcagccacagtcgaaccgcagttcctcaggac
tttggttatctcccagagaaaagtgtcatccgagcttcagtagacttcatcaccgaagcg
ggaagaaaaggacctgagttcactcctccacacctggtgaagacggtgctggcagcgtta
gtgacggtcggtggaagcttccagtatcctccagtcaactggagcgccatcctctctccg
ctgatgagactcggctttggagaggaggtgcagcatcactgtttagcgttagctgccagt
caggcccagtcttcccagagtgccgcacttttcctcggcatctggcttgtgcctcccctg
gttcacagcctgagtatgcactccagggcttctctgtacgagtgcctgaactcctggatg
aagcacgtggctgaagacaaactccaggtgtacgtggacagtctggcagtccagcagttt
gtgcctgacacacgtcctcagcgcctgtccctgtgcctgtccatcctgcgtgggctgtcc
aaagccatggcggtccccaacccgccccaaaactgctggactgccctgtgctccaccact
gaaaagatctataacctcttacctgataatatccctgcgggtgaggtgcacctgtatgaa
gccatgtgttcgtgtctgtctgaactgagcgacactgagattgaccgcatacttaaagtc
actgaggctaatgtggaaaaaacagctttcatcctctgctacctgacctctaaaggcaga
gtccctctgctcggactcaatgatgtcatcagtaccatcctccaggtggggaataagaaa
agaatcagctggcttctcctgcaggccctccaccaatcacgcttcgcctctagtcccagt
acaggggtctctaaacgaatggagtggcttttggagttaatggggcacatcagaaatgtt
gcatacggatctccttctgttaaatgtgtcagtgttatagagggaacagacttcctcctc
ggtgtgtttgctgcagcagtggtgtcttgggctgatcattgtgctccgcttctcattgga
atcagggcccagtggtttccctgggaacagtcctctctgacaacagacctgtcccatgac
ctctgtgtcaaccctgctatcacagagctgtcggtcgcgtcatgccttcttgcaatccca
tgcagcatgaaaaaactactctgcaaagagccgtggaaatcccagtcacagaagttcatc
gactggctcttcagtattacagaaggtcctaaactaggtttctctgagactgccttactt
acagccaaagcgactctaatggctctgagatccagctctgagttcaagaagaagggtgtg
tggaccagggcgtatggttggtga
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integrated database retrieval system
