Carassius auratus (goldfish): 113069428
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Entry
113069428 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113069428
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113069428
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113069428
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113069428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
113069428
NCBI-ProteinID:
XP_026098313
Ensembl:
ENSCARG00000067941
UniProt:
A0A6P6MPH6
LinkDB
All DBs
Position
Unknown
AA seq
2339 aa
AA seq
DB search
MAIGTQLYLLLWKNFTYRRRNKVQLIIELLWPLFLFLILIAVRQSHPPYKQSQCHFPNKA
LPSAGTLAWFQGIICNVNNPCFHHPTAGETPGRVSNFENSILSRLFVDIRTVLTISGNRT
VLSNLQDLSQTIQRLGERPEAWPNLPVREYLRANESFSSFLRTNTSIPSASVDQLLRARL
NLQVVALAGGGMRLSDIVCNASLLGRYLTVDKRDSFPDLQRVLCAVPSNIMQKAEQIFLS
QLDVSKILTRDRLQANAADLRLISRVVSSVSRELASVMDDISSLSSFSELNSEMRLLTPE
NRSALPRESFRAFSRIMCGHPEAGGERIPSFNWYEDQDIKSFLGRNASEATDLENDNSTT
PFCENLIGSLESNPLSRIVWRSIKPLFVGKLLYTPDTPVTRSVMSEVNRTFQDFQILNDM
QEAWQEVGPRIKTFMESSLEIRLLQDLLRRPEVAVVVNLQLENTLWTASRISRFLSTPDP
DTPRRDGAPPTWLDLYQDLNNTFHTLSELTKCFSLNKMEGLATEGEMVERALELLEDRQF
WAGIVFLLPEPSSSSLPSHVKYKIRMDIDDVTRTNKIKDKFWDPGPAAEPFSDLRYVWGG
FIYVQDLVERAVTRLLTGKEAKMGIYVQQMPYPCFVDDVFIRVLNRSLPLFMTLAWIYSV
AMIIKGVVFEKEARLKETMRIMGLSSGMLWLSWFISSYLPFLFSAGLLIAALKWGDILPY
SDPAVVFFFLAAFATATIMLCFLISTFFSRANLAAACGGLIYFTLYLPYVLCVAWREHLT
STHRILASFLSPVAFGFGCEYFSQYEEQGVGIQWFNLRSSPLEGDSYNFTVSIVMLYADA
VIYALATWYIEAVFPGQYGVPRPWYFIFQLNYWGGVPLEVGLPVPPAPRDEPDDRIEAEP
TNLILGVSIRNLVKIYKKGAKLAVNHLNIKFYEGQITSFLGHNGAGKTTTMSILTGLFPP
TAGTIYVKGMDIRTDMDMIRRTLGVCPQHNVLFDILTVEEHVWFYGRMKGMSLKEVKKEM
DSLLEDVGLQHKRHEQTKNLSGGMQRKLSVAIAFIGGSKVVVLDEPTAGVDPYSRRGIWD
LLLKYRQGRTIILSTHYMDEADLLGDRIAIISQGKLCCCGTPLFLKAHLGTGYYLTLVKR
EMHSMPSSASTGKLPLTAATKDSDSSVSDDTGLGSEENGFDVAALMALAQQYIPETQLVE
DIGREAVINLPHAASEDGSLALFLKELNKRQGEFGVVSYGLSDTTLEEIFLRVAEETGVD
ADPEEPAASPVHQGAPSVDRDTGRKQPIRREARETEPLSGDGQGGNAPLTGCFLTCQQLR
ALFTKRLKYALRSRRGILAQIVLPAVFVLIALLFSLIVPPFGKYPPLELQPWMYGEQFTF
FSNDAPQNPAIQNLLDALLNPPGFGTRCMEPSGDTECSEEGEIKFVRPQIPFSMWQLFQK
GNWTVEKPSPDCECSTEDIRRMLPDCPEGAGGIPPPQMKSMTGDFLQNLTGRNISDYLIK
TYPQILKKSLKTKKWVNEFRYGGFSLGAKSSQAVDEPHYLEESVLAIRRRYNIIENGSLD
QLLHRLPDVLAGLTSQNNVKVWFNNKGWHAMASFVNIMNNGLLRANLPPDMERRKYGMTA
YNHPLNLTKEQLTEMALMTTSVDVLVSICVIFAMSFVPASFVLFLIEERVSKSKHLQFVS
GVKPILYWTTNYVWDMLNYTVPATMVVFIFISFQQESYVSEKNLPALVLLLLLYGWSITP
LMYPASFIFSVPSTAYVVLTSINLFIGINGSVATFVLELFIDEHLNEVNRILKKVFLIFP
HFCLGRGLIDMAKNQAMADAFQRLGTKQNLDPLSWDFVGKNLFAMAMEGIVFFIFTVLLQ
YKFFVNLSRWSGFVLPPLGTEDEDVARERDRVKSGRAVGDVLILKDLSKVYQAGRKPAVN
RLCLGIPRGECFGLLGVNGAGKTSTFRMLTGDTHITYGEAFLSNHSVLTEMQKVHQLMGY
CPQFDAISDLLTGREHLEFYARLRGVPEAHVAKVAQLGVQKLGLSQYAEREAGGYSGGNK
RKLSTAISLIGAAPVIFLDEPTTGMDPKAKRFLWNCILNVIKEGRSVVLTSHSMEECEAL
CTRMAIMVNGRFQCLGSVQHLKNRFGDGYTIILRLSSPSTEPCPVDAFIQSSFPGIQLKE
RHQNVLQYQLPSQACSLACVFELLSNNYEELGIVDYSVSQTTLDQVFVNFAKEQTDDEEL
REVMINGGGSVANQANRPQRPTDLKLKISSRSSTPHSLTTPSTDQATRSVQTPESAFTGS
KTKRSKSNSPSVSGQQQQIRMEPVGEAANGSNPLEDQTPGKKDPSTLFIVGSKTQESKV
NT seq
7020 nt
NT seq
+upstream
nt +downstream
nt
atggccattggaacacagctctacctgctgctgtggaaaaacttcacataccgcaggaga
aacaaggtgcaattgattattgaactcctgtggccgctcttcctcttcctcatcctcatt
gctgtccggcagtctcacccaccgtataaacagagccagtgtcattttcccaacaaggcc
cttccttcagcaggcacgctggcatggtttcagggcatcatctgcaatgtcaacaatccc
tgttttcatcaccccacggcaggagagacacccgggcgagtgagcaactttgaaaactcc
atactatctcggcttttcgtggatatcagaactgtcctgacaatcagtggtaaccggaca
gtactctccaacttacaggacctgtcacagacaatccagagactcggagaaagaccagaa
gcttggccgaatctacctgtaagagagtatctcagagccaatgaaagcttctcctccttc
ctgcggacaaacaccagcatcccttcagcatctgttgatcaattactgcgggcacgattg
aaccttcaagtggttgcattagcaggtggaggcatgcgtctgtcagacatcgtctgtaat
gcttctctcttgggtcggtacctcactgttgacaaaagagattctttccctgacctgcaa
agggtgctgtgtgctgtgccttcaaatattatgcagaaggccgagcagatcttcctctca
cagctggacgtcagcaagatcctcacgagagacagactgcaggcaaatgcggctgatctc
cgtctcatcagtcgggttgtttcctctgtgtctcgggaactagcatcagttatggatgac
atctcttctctgtccagtttctcagagctgaactcagagatgaggctactgacacctgaa
aaccgctccgcactgccacgcgagagctttcgtgccttctccagaatcatgtgtggacac
ccagaggcagggggagagagaatcccttcattcaactggtatgaagatcaggacatcaaa
tctttcctgggcagaaatgcatcagaggcgacagaccttgaaaacgacaacagcaccact
ccgttctgtgaaaacctgattggaagtctggagtcgaaccctctctcacggattgtgtgg
cgaagcatcaaaccactgttcgttggaaagctgctctacacaccagacactccagtcacc
cgttcggtcatgtcagaggtaaacagaacttttcaggacttccagattctgaatgacatg
caggaggcgtggcaggaagtgggtcccagaatcaaaaccttcatggagagcagtttagaa
attcggctcctgcaggatcttctgagaaggcctgaggtggcagtagttgtgaatctacaa
cttgagaacactttgtggacggcctctcgcatttcccgtttcctctcaacgcctgaccca
gatacacctcgcagagatggcgctccacccacctggctggatctgtaccaggatttaaac
aacaccttccacactctctcagaactcactaagtgcttctctctgaataaaatggagggt
ctggccacggagggtgagatggtcgaacgagccctggagctgctggaagatcgtcagttt
tgggccggaatcgtcttcctccttccagagccttcatcgtcctctctgccgtctcatgtc
aaatacaagatccgcatggacatagatgatgtaacccgcacgaacaagatcaaagacaaa
ttttgggatccaggcccggctgctgaaccgttcagtgacctccgctatgtgtggggtggt
tttatttatgtacaggatttagttgagagagctgtgacacgtttgctcaccggtaaagag
gcgaaaatgggcatatatgtgcagcagatgccctacccctgctttgttgatgacgtgttt
atacgcgtcctgaatcgttctctgcctctgtttatgactctggcgtggatctattcagtg
gctatgatcataaagggcgtggtctttgagaaagaggctcgtctgaaggagacgatgcgt
atcatgggtctgagctctgggatgttgtggctcagctggttcatcagcagttacctgccc
ttcctgttcagtgctggactgcttatcgccgcccttaagtggggcgatatcttaccctac
agtgaccctgctgttgtgttcttcttcctggctgcatttgctacagccaccatcatgctt
tgcttcctcatcagcacgttcttctcgcgagctaacctggctgcagcatgtggaggactc
atttacttcactctgtacctgccgtatgtgctgtgtgtggcctggagggaacatctgacc
agcacacacaggatcttagcgagcttcctgtctccagtagcctttggttttggctgtgag
tatttctcgcagtatgaagaacaaggtgtggggatccagtggttcaacttgagatccagc
cctttggagggagacagctacaacttcaccgtctccattgtgatgctgtacgcagatgcc
gtcatctatgcactggccacttggtacattgaagctgtttttccagggcagtatggggtc
cccagaccgtggtattttatcttccagctgaattactggggtggggtacctttagaagtg
gggttacctgttcctcctgctccgagagatgaacccgatgatcggattgaagctgagccg
acaaacctaattctgggagtttccataagaaacttagtgaagatttataaaaaaggggcc
aagcttgctgtcaatcacctgaacataaagttctatgagggacaaataacatcctttctg
ggtcataatggagctggcaagacgaccactatgtccattctaacaggactgtttcctccc
actgctggtacgatatacgtgaagggaatggacattcgcacagatatggacatgatccgc
aggactctgggagtttgtccccagcacaacgtcctttttgacattctgacggtggaggag
catgtgtggttctatggtcgaatgaagggcatgagtctgaaggaagtgaagaaggagatg
gattcacttctggaggatgtgggcttacagcacaaacgacacgagcagaccaaaaacctt
tcaggtggcatgcaaaggaaactgtcagttgcgatcgctttcataggcgggtcaaaggtt
gtggtcttggatgagcccacagctggtgtggacccttactcccgccgtgggatctgggac
cttctgctcaagtaccgtcaaggccgcaccatcattctgtccacacattacatggatgag
gctgacctcctcggtgaccgcattgcaatcatttcccaggggaagctgtgctgctgtgga
acgccgctcttcctcaaggctcatcttggtactggatactaccttacgctggtcaagaga
gagatgcatagtatgcccagcagcgccagcactggcaaactccctttaactgcagctacc
aaggacagcgattcctcagtaagtgatgacacaggactgggcagtgaagagaatggattt
gatgttgccgcccttatggctcttgcacagcagtacatccctgaaactcagctggtggag
gacattggcagagaggcggtcatcaacttgccccatgcagcctcagaggacggcagtctc
gccctctttttgaaggaactgaacaagcggcagggcgagtttggtgtggtcagttatgga
ctgtcagacaccacgttagaagagatctttttgcgtgtggctgaggagacgggtgtagat
gcagaccctgaggagccagcagcgtctccagtccaccagggggcgccgtctgtggataga
gacacaggacgaaaacagccaatcaggagagaggcccgggagacagaaccgctgagtggg
gacggtcaggggggcaatgctcctctaacaggctgcttcctcacatgtcagcagcttcga
gcgcttttcaccaaaagactgaagtatgcccttcgcagtcgcagaggcattcttgctcag
attgttcttcctgcggtgtttgtccttatcgctctgctcttcagtctcattgtcccaccc
tttgggaaatatccacccctggagctccagccatggatgtacggagagcagttcaccttc
ttcagcaatgatgccccacagaatccagccatacagaacctcctggacgccctgctgaac
ccacctgggtttgggaccagatgtatggagccgagcggagacactgagtgttcagaggaa
ggtgaaataaagtttgtccggccccagattcccttcagcatgtggcaactctttcaaaaa
ggcaactggactgtagagaagccgtcccctgactgcgagtgcagcaccgaggatatccgc
aggatgctgccggactgtccggagggggcagggggaatcccccctcctcagatgaaatca
atgacaggtgatttcctgcaaaatctgactggtcgcaacatttctgactacctcatcaaa
acatatccccagattctgaagaaaagtttgaagacgaaaaaatgggtaaatgaatttaga
tatggaggtttctctctcggagcaaaaagctctcaagctgtggatgagccacattacctg
gaggagtctgttttggctatcaggagacgctacaacattatagagaatggctctttagat
cagctccttcacagactaccagatgtccttgcgggactcaccagccaaaataacgtgaag
gtctggtttaataataaaggatggcatgccatggcatcattcgtgaatatcatgaacaat
ggtctccttcgtgccaacctgccacctgacatggaaagacgtaaatatggaatgacagcc
tacaatcacccgctcaacctcaccaaggagcagctgacagagatggccctgatgaccacc
tcagtggacgttctggtgtccatttgtgttattttcgccatgtcatttgttcctgccagc
ttcgtcctgttccttattgaggaacgggtgagtaaatcaaaacacctccagtttgtcagc
ggagtgaagcccatcctgtactggaccaccaactacgtatgggacatgctgaactatact
gtaccagccactatggtggtcttcatcttcatcagcttccagcaggagtcatatgtatct
gagaagaatctgcctgcactggtgctcttactcttgctgtatggctggtctatcactcca
ctcatgtacccagcctccttcatcttctccgtccctagcactgcctacgtggtcctcacc
tccatcaacctctttatcggcatcaatggaagcgttgccacctttgtcctggagctcttt
attgacgagcatttgaacgaggttaacaggatcctgaagaaggtctttctgatcttccct
cacttctgtctgggccgaggtctcattgacatggccaagaaccaagccatggcagatgcg
tttcagcgactgggaaccaaacagaatctggatcctttatcctgggattttgtcgggaag
aacctgtttgcaatggcgatggaaggaattgtgtttttcatcttcactgttctcctgcag
tataaattctttgttaatttgagccgatggtctggctttgtgctgccccccctgggcacg
gaggatgaggatgtggcgagagagcgagatcgtgtcaagagtggtagagctgtgggagac
gttctcatcctcaaagaccttagcaaggtataccaggcaggcaggaagccagcagtgaac
cggctttgcttgggcattcctcggggagagtgttttgggcttcttggtgttaacggggct
gggaaaacctcaacctttcgcatgctaacaggagacacccacatcacttacggagaagca
tttcttagcaaccacagcgttcttacagaaatgcagaaggttcatcagctgatgggctac
tgtccccagtttgatgccatcagtgacctgctgacgggacgagagcacctagagttctac
gcacgcctcagaggagtgcctgaggctcatgttgcaaaggtggcacagttgggagtgcag
aagcttggtctgagtcagtatgctgagcgagaggctgggggctacagcggaggaaacaag
cgcaaactgtccaccgccatttccctcattggagctgcgcctgtcatcttcctggatgag
ccaacaactgggatggacccaaaggccaagcgcttcctctggaactgcatcctaaatgtg
atcaaagagggacgatccgtcgttctcacctcccacagtatggaagagtgtgaggctctg
tgcacccgaatggccatcatggtgaacggcaggttccagtgtctgggttcagttcagcac
ctgaagaacaggttcggagacggttacacaataatcctccgtttgtccagcccatctaca
gaaccatgtccggtggacgccttcatccagagctccttcccgggcatccagctgaaggag
agacaccagaatgttctccagtaccagctgccatcacaagcctgttcactcgcttgtgtc
tttgagcttctgtcgaataattatgaggagctggggatagttgactactcggtgtcacag
actacgctggatcaagtgtttgttaactttgctaaagagcagacagatgatgaagagctc
agggaagtcatgataaatggtggaggatccgtggcgaatcaagccaacagacctcaacgg
cccacagacctcaaactcaagatttccagcagatcttccacaccacactctttaacaacg
ccctctacagatcaagcaactcgctcagtacaaacccctgagtctgcattcactggttca
aagaccaaaaggagcaaatcaaacagtccatcggtctcaggacagcagcagcagatccgg
atggaacctgttggtgaggcagctaatggatcaaaccccctcgaggaccagactcctggg
aaaaaagacccatccacgttgtttattgtcggaagcaaaacacaggaaagcaaagtgtaa
DBGET
integrated database retrieval system
