Carassius auratus (goldfish): 113069849
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Entry
113069849 CDS
T07313
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03420
Nucleotide excision repair
caua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
113069849
09124 Replication and repair
03420 Nucleotide excision repair
113069849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
caua04121
]
113069849
03400 DNA repair and recombination proteins [BR:
caua03400
]
113069849
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
113069849
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
113069849
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_2nd
Beta-prop_RIG_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_SCAP
Beta-prop_RSE1_2nd
Beta-prop_IFT140_2nd
Nucleoporin_N
Cytochrom_D1
Motif
Other DBs
NCBI-GeneID:
113069849
NCBI-ProteinID:
XP_026098691
Ensembl:
ENSCARG00000018155
UniProt:
A0A6P6MRJ1
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MLSFLYARQSGVDDPVRLRRAESTRRVLSLELNHNRDVDRIHGNGINTLDIEVIDGRYML
SGGSDGVIVIYDLENNSKKPQYTCKAICTVGRSSRHVHKFSVETVQWYPHDTGMFVSSSF
DKTMKVWDTETLKPAEEFQFDGNVYCHHMSPVARKHSLVAVGTKDPKVQLCDLKSGSRIH
ILQGHRGEILSVRWSPRYDHILATASTDSRVRIWDVRRASGSLFTLDQHNGDKSKASSEA
VNTAHNGRVNGLCFTADGLHLLTTGTDDRMRLWNSATGENTLVNYGKVVNESRKGLKFTV
SRGCSPEFVFVPCGSAVAVYGLHSGELITMLRGHYNNVDCCEFHPDYQELYSGGKDCNIL
AWVPVLRQPDIEDDETNSKRGGTQAAINPAFEDAWSSDED
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgttaagttttctatatgccaggcaatcaggggttgacgacccagttcgtctgagacgg
gcagagtctacaagaagggtgctgagtctggagttgaaccacaacagagatgttgatcgt
attcatggcaatggaattaacactctggacattgaggttattgatggaagatatatgttg
tcaggtggatccgatggcgtaattgtgatctatgacttggaaaacaacagcaagaagcct
caatacacttgcaaagcaatctgcacagtgggcaggtccagtcggcatgtgcataaattc
agcgttgaaacagtgcagtggtacccacatgacactggtatgtttgtatccagttcattc
gacaaaaccatgaaagtatgggacacagaaactcttaagccagctgaggagttccagttt
gatggcaatgtctactgtcaccacatgtctcctgtagccaggaaacacagtcttgtagca
gttggtaccaaggaccccaaagtgcagctttgtgatctgaagtctgggtcgcgcatccac
atccttcagggtcacaggggtgagatcctctcagtcagatggtctccacgatacgatcac
atcctggccacagccagcactgacagtagggtccgtatctgggatgtgagaagagcctct
gggagtctttttactttggaccagcacaatggggacaaatccaaggcctcatctgaagca
gtgaacacagcacacaatgggcgagtgaatggattgtgctttacagctgatggacttcat
ctcctcactactgggacggatgatcgcatgcgcctttggaacagtgccacaggggaaaac
acattagtgaattatgggaaggttgtgaatgagagtcgcaaaggcctcaagtttaccgta
tcgaggggctgcagtccggagtttgtgtttgtgccatgtggcagtgcggtagcagtgtac
gggcttcactcaggagagctgatcactatgttaaggggacattataataacgtagactgc
tgtgagttccacccagactatcaggagctgtacagtggaggtaaagattgtaacatcctg
gcctgggtgccagtgctgagacagcctgacattgaggatgatgaaaccaactctaaacgg
ggtggaacacaagctgctatcaatcctgctttcgaagatgcctggagcagtgatgaagac
tga
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