Carassius auratus (goldfish): 113070386
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Entry
113070386 CDS
T07313
Name
(RefSeq) polyadenylate-binding protein 4-like isoform X1
KO
K13126
polyadenylate-binding protein
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113070386
09123 Folding, sorting and degradation
03018 RNA degradation
113070386
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113070386
03041 Spliceosome [BR:
caua03041
]
113070386
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113070386
mRNA cycle factors
Stress granule specific factors
113070386
Spliceosome [BR:
caua03041
]
Complex C
Other components
Complex C specific factors
113070386
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RBD_RDR6
RRM_7
OB_RNB
POP1_C
DUF6262
Motif
Other DBs
NCBI-GeneID:
113070386
NCBI-ProteinID:
XP_026099451
Ensembl:
ENSCARG00000043663
UniProt:
A0A6P6MTM3
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSRVFVASAERALDTMNFDVVKGKPIRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALY
DTFSAFGNILSCKVVCDENGSKGYAFVHFETQDAADRAIEKMNGMLLNDRKVFVGRFKSR
KEREAEMGAKAKEFTNVYIKNFGEDMDDPRLKELFDKYGKTLSVKVMTDPTGKSRGFGFV
SYEKHEDANKAVEEMNGMELNGKTVFVGRAQKKMERQAELKRKFEQLKQERISRYQGVNL
YIKNLDDTIDDEKLRKEFSPFGSITSAKVMLEDGRSKGFGFVCFSSPEEATKAVTEMNGR
IVGSKPLYVALAQRKEERKAHLTNQYMQRIAGMRAMPANAIINQFQPAGGYFMPAVPQAQ
NRTTYYAPNQLTQMRPNPRWQQGGRGQGGFQGMPNSLRQPGPRANIRHMAPSASTQGPRG
IPTGAQRVGPMGPRPGMGVTTPRAMPPYKYATTIRHTQPQVVQPITLQQAQPAVHVQGQE
PLTASMLAAAPPQEQKQMLGERLFPLIQAMHPSLAGKITGMLLEIDNSELLHMLESHESL
RSKVEEAVAVLQAHQAKKDATQKVGVTAATVAATS
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtgtttttgtggcttcagcggaaagagctttggacacaatgaacttcgatgtg
gtcaaaggaaagccgatcagaatcatgtggtcacaaagagatccgtcacttaggaaatct
ggagttggaaatgtcttcatcaaaaatctggacaaatccattgacaacaaggccctatac
gacaccttctctgcttttgggaacatcctgtcctgtaaggtggtgtgtgacgagaacgga
tctaagggttacgcctttgtgcattttgaaactcaggacgcagccgatcgcgccattgag
aagatgaatggcatgttgctgaacgaccgcaaggtgtttgtggggcgtttcaagtccagg
aaggagagagaagcagagatgggtgccaaagccaaagaattcaccaacgtttacatcaag
aacttcggcgaggacatggatgatccgagactgaaggagctctttgataaatatggtaaa
acactgagcgtgaaggtcatgactgaccccacagggaaatctcgtggatttgggtttgtg
agctatgagaagcatgaggatgctaacaaggctgtggaagagatgaatggtatggagctt
aatggtaagacggtgtttgttggccgagcacagaaaaagatggagagacaagcagaactc
aagaggaagtttgaacagctcaaacaggaaagaatcagcagatatcagggtgtgaacttg
tatatcaagaatcttgatgacaccattgatgatgagaaacttcgtaaagagttctctcct
ttcggctccattaccagtgccaaggtgatgctggaggatggcaggtccaaaggttttggc
tttgtgtgtttctcctcacccgaggaggccacaaaggccgtgacagagatgaacggccgt
attgtgggctccaaaccactgtatgtagccctggcccaacgcaaagaagaacgcaaagct
catctgaccaatcaatacatgcagcgtatcgctggcatgagggccatgcctgccaacgct
atcatcaaccagttccagcctgccggtggttactttatgcccgctgtgccacaggcccag
aacagaacgacatactatgcaccaaaccagctcactcagatgcgtccgaaccctcgctgg
cagcagggtggcagaggtcagggtggtttccagggcatgcccaactccttgcgccagcca
gggccccgtgccaacatacgccacatggcccccagtgcttccacccagggcccacgcggg
atccccacaggtgcacagagagtgggaccaatgggtccccgcccgggcatgggggtgacg
actccacgtgccatgcccccatacaagtacgccaccaccatacgacacactcagcctcag
gtcgtgcagcccattactctgcaacaggctcagccagctgttcatgtgcagggtcaggag
cctctcactgcctccatgttagctgccgctcctcctcaggaacagaaacagatgcttggt
gagcggctgtttcctctcatccaggcaatgcaccccagtctagccgggaagatcacagga
atgctgctagagatagacaactctgagctgctgcacatgctggagtcccatgagtctctg
cgctccaaggtggaggaggctgtcgcagtgcttcaggctcatcaggccaagaaagatgcc
acacagaaagtgggagtcaccgctgcgactgtagccgcaacatcatga
DBGET
integrated database retrieval system
