Carassius auratus (goldfish): 113070544
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Entry
113070544 CDS
T07313
Name
(RefSeq) netrin receptor DCC-like isoform X1
KO
K06765
deleted in colorectal carcinoma
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
113070544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113070544
Cell adhesion molecules [BR:
caua04515
]
Immunoglobulin superfamily
DCC/UNC5 family
113070544
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
Interfer-bind
Ig_Rha78A_N
C2-set_2
C2-set_3
Sp38
Ig_C17orf99
Ig_4
Ig_6
Fn3_SaeA_3rd
EphA2_TM
Arylsulfotran_N
TM_ErbB1
GH101_dom-5
Motif
Other DBs
NCBI-GeneID:
113070544
NCBI-ProteinID:
XP_026099715
Ensembl:
ENSCARG00000023546
UniProt:
A0A6P6MST3
LinkDB
All DBs
Position
5:complement(1718486..1886692)
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AA seq
1445 aa
AA seq
DB search
MGCVTGDIHRSRLYALLIGLHVLSGVSRTHGSDARRSFVELRFVLEPQDSVTVRGGELQL
DCEARSDQGVPVISWKKDGVLLSSLVDDRRRLLSNGSLLVQSVLHSRHHRPDEGSYQCLA
TLEGLGAIVSRTAKVTVAGPLRVVVPTESVSAHLGDTALLRCEVTGEPMPVVRWQKNRED
LPLTFDPDSRVVILPSGSLQVSRVQPPDSATYRCLAENPSSSRTGTDADLRVIPEPGVER
ALMFLQRPQKVTALQGRDAVLECSASGFPNPSFYWMRGDELVQSRSKKYSLLSASNLLIS
SVTDDDSGTYTCVAHNRQQNISASCELSVLVPPQFLSYPSNTYAYESTDIEMECAVTGNP
QPTVRWVKNGEAVIPSDYFQIVEGGHLQILGLVRSDEGFYQCIAENEAGNSQAMAQLILL
QPVTPSSGVLPSAPRDVAPVLVSSRFVRLGWRPPEEPRGTILTYCIFFSEEGINRERSVN
VTEAESLQLTVSNLRPEAIYSFRVVAYNEQGPGESSEAIRLSTQAELLVPGPVENLRAEA
ASPTSIQTSWDPPSHTSGPIQSYRLLWTETSTAKEQNVEVVGQSYRMEGLKKFTEYSLRV
LAVNRHGPGLSDTDMLITTLSDVPSAPPQNISLEVVYSRSIKVSWQPPPANTQNGFITGY
KIRHRKTGRRGEQEAIEPNNLWYLFTGLEKGSQYSFQVAAMTVNGTGPSSEWHTAETPEN
DLDETQVPNQPSSLHVRPLPNSIIMSWTPPLNPNILVRGYIIGYGVGSPYAETVRVDSKQ
RYYSIENLEPSSHYVISLKAFNNAGEGVPLYESAVTRSMSDPSDTSDDDLFHLFDKFPTP
IPDSSTPMIPPVGVQAVALTSDSVRVSWADNSIPKNQKTSEVRYYSVKWKTSHSTSSKYK
SADTTALSHTVTGLKPNTMYEFSVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVIGR
EGRPRAILISWQPPLEANGRITGYILYYTLDKNMPIDDWVMEPIGGDRLTHQVMDLNLDT
VYYFRIQGKNAKGVGPLSEPVQYRTAKVEHPDKMANDQGRHGDSGYWPSDNNPIDMSSLN
EPPIGQMRPPHGSVTPQKNSNLLVIIVVSVGAVTVVVVVIVALICTRRSSAEQRKKRATH
STGKRKGSQKDLRPPDLWIHHEEMELKNIEKPSSSAPSDRESPIQSCQEMAPVSHSQSES
QMGSKSSHSGADGDEASSSISTLERSLAARRATRTKMMIPLDSQPSNTPVVSAIPVPTLD
SSQYPGILPSPTCGFTTHPKFTLRPMPFSTLSVDRSYAAAEGAAPMAPQQPQPLIPTAQS
EPSGLEEIPSRTIPTACVRPTHPLRSFTNPLLPPPMGTIEPKVYTPMTGGSLPKPQVKTA
SLGQAGKARSPLLPVSVPTAPETGEDGQKQTDDPASIYEQDDLSEQMASLEGLMKQLNAI
TGSAF
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atgggctgcgtcactggagatattcaccggagcaggctttacgcgctcctcatcgggctg
catgttctcagcggtgtctccagaacgcacggctcggacgcccggcggtctttcgtggag
ctgcggttcgtgctggagcctcaggactcggtgacggttcggggcggtgagctgcagctg
gactgcgaggcgcgctcggatcagggcgttccggtcatctcctggaagaaggacggtgtt
ctgctgagctcgctggtggacgatcgcagacggctgctgtctaacgggtcgctcctggtg
cagagcgtgctgcactcgcgtcaccaccggccggacgagggctcgtatcagtgcctggcc
acgctggagggcctcggagccatcgtcagccgcaccgctaaagtcaccgtcgccggtcct
ctgcgtgtggtggtccccaccgagtcggtctcggctcatctgggtgacacggctcttctg
cgctgtgaggtgaccggtgagcccatgcccgtggtgcgctggcagaagaacagggaggac
ctgcccttgacctttgaccctgacagcagagtggtcatcctgccctctggatctctgcag
gtcagcagggtccagccgccggactcggccacataccgctgcttagcagagaaccccagc
agctcccgcacaggcacagacgcagacctgcgcgtcataccggagcccggggtagagcga
gcgctgatgttcctccagaggcctcagaaggtcacggctctacagggcagagatgcggtt
ctagaatgttccgcctccggcttccccaacccgtccttctactggatgagaggagacgag
ctggtccagagcagatcaaagaagtactctctcctgagcgccagcaaccttctgatcagc
agcgtcacagacgacgactcgggaacatacacctgcgtcgctcacaacagacagcagaac
atctcggcgtcctgcgagctctccgtgctcgtgccgcctcagttcctcagctacccgtcg
aacacgtatgcgtatgaaagcacggacatcgagatggagtgtgccgtgacgggaaaccca
cagcccaccgtccgctgggtgaagaacggagaggccgtcattcccagcgactacttccag
atcgtggagggcggtcatctccagattctgggtctggttcgctcagatgagggtttctat
cagtgcatcgctgagaacgaggcgggaaacagtcaggcgatggctcaactcatcctgctg
cagcccgtgaccccgagctcaggcgtcctcccctctgctcctcgtgatgtggcccctgtc
ctcgtgtccagccgctttgtgcgcctcggctggcggcccccagaggagccgcgcggaact
atcctgacttactgcatcttcttctcagaggagggaatcaacagggagcgcagtgtgaac
gtgacagaggccgagagtctgcagctgacggtcagtaacctcagacccgaggccatttac
tccttcagggtggtggcgtataacgagcaggggcccggagagagctcagaggccatccga
ctgtccacgcaagccgagcttctggttcctggtccagtggagaacctgcgggcagaagct
gcgtctccaacctccatccagacgtcctgggatcctccgtcccacaccagcggccccatc
cagagctacagactgctgtggaccgagacctccaccgcaaaagagcagaacgtggaggtg
gtgggtcagagctacaggatggagggactgaagaagttcaccgagtattcgttacgagtg
ctggcggtcaatcgacacggaccgggcctctccgatacagacatgctcatcaccacgctc
tcagacgtgcccagcgctccaccgcagaacatctcactggaggtcgtctactcacggagc
attaaggtgagctggcagcctccacctgcaaacacacagaacggattcatcaccggatac
aagatccgccatcgcaaaacaggccggcggggggaacaggaggccatcgaacccaacaac
ctctggtacctgttcaccggattggagaaaggcagccagtacagcttccaggtggcagcc
atgacggtcaatggcacggggcccagcagcgagtggcacacggccgagacgccagagaac
gacctggacgaaactcaagttcccaaccagccgagctctctgcacgtgcgtccgctgccc
aacagcatcatcatgagctggacgccgccgctcaaccccaacatcctggtgcgcggctac
atcatcggctacggagtgggcagcccatacgccgagaccgtgcgagtggacagcaagcag
cgctactactccatcgagaacttggagcccagctctcattacgtcatctctctgaaggcc
ttcaataacgcgggtgaaggagttcctctgtacgagagcgccgtcaccagatccatgtca
gacccctcagacacgtccgatgacgatctgttccatctgtttgataaattcccaaccccg
atcccagattcgtccacgcccatgattcctcccgtaggtgtgcaggccgtggcgctcacg
tccgactcggtgcgggtcagctgggctgataactccattcccaaaaaccagaagacctcg
gaggtgcgctactactccgtcaagtggaagaccagccactccaccagcagcaaatacaag
tcggctgatactacagctctcagtcacactgtcactggactgaagcccaacaccatgtat
gagttctctgttatggtgactaaaggacgcaagtccagcacgtggagcatgacggcacat
gccaccacttatgaagcagcaccaagctccgccccaaaggacctgactgtgattggccga
gagggacgtccacgagccattctgattagctggcagccgccgctggaggccaacggacga
atcacaggttatatcctgtactacacgctggacaagaacatgcccatcgatgactgggtg
atggagcccatcggaggagaccgcctcacacaccaggtcatggacctcaacctggacacc
gtctactacttccgcatccagggcaagaacgctaaaggagtggggccgctgtcggagccc
gtgcagtacaggacggccaaagttgagcatccagataagatggccaatgatcaaggtcgt
catggagacagcggttactggccttctgacaataacccgattgacatgagcagcctgaac
gagcctccgatcggtcagatgcggccgcctcatggcagcgtgacgccgcagaagaacagc
aacctgctggtgatcatcgttgtttctgtgggagccgtgactgtggtggtggtggtgatt
gttgccctgatctgcacccgccgctcatccgcagagcagaggaagaaacgtgcgacacac
agcactgggaaacgaaagggcagccagaaagatctacgacctcctgacctctggatccat
catgaggagatggagctgaagaacatagagaaaccctcgagctccgccccctccgaccgc
gagtcgccaatccagagctgccaggagatggcaccagtcagccacagccaatcagagagc
cagatgggcagcaagagcagccactcaggtgcagacggggatgaggcttccagcagcatt
tccacgttagagcgatcgttagctgcccgccgggccacgcgcaccaagatgatgattccc
ttggactctcagcccagcaacacaccggtggtcagtgccatcccagttcccacactggac
agcagtcagtatccgggcatcctgccgtcacccacctgtggattcaccacacaccccaaa
ttcaccctgcggcccatgcccttctccacactgagcgtcgaccgcagttacgctgccgca
gagggcgctgctccaatggccccgcagcagccgcagccgctgatccccacggcgcagtcg
gagccatcggggttggaggagattcccagccgcaccattccgaccgcttgtgtgcggccc
acgcatcccctgcgcagcttcaccaacccactcctgcctccacccatgggcaccatcgag
cccaaggtctacacgcccatgacaggcgggagtttacccaaaccacaggtgaagacggcc
tctctgggtcaggctgggaaggcccgctctccgttactgcctgtgtctgtgcccaccgct
ccagagacgggtgaagacggacagaagcagacagacgacccggccagcatatacgagcag
gacgatctgagcgagcagatggccagtctggaaggtctgatgaagcagctcaatgccatc
acgggttcagccttttaa
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integrated database retrieval system
