Carassius auratus (goldfish): 113073170
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Entry
113073170 CDS
T07313
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113073170
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113073170
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113073170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
zf-C2H2_DHX34
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_16
AAA_19
AAA_23
XAF1_C
Motif
Other DBs
NCBI-GeneID:
113073170
NCBI-ProteinID:
XP_026101828
Ensembl:
ENSCARG00000054054
UniProt:
A0A6P6MYR3
LinkDB
All DBs
Position
Unknown
AA seq
1139 aa
AA seq
DB search
MSHEREESRSWDWDSPRCRAQLDEVFFRHHDYIQTGSAEHKEFWSFFERFQRFRAKKEMS
AARSSKQESHRKKSGSVDLGLPREYDARYRINISVCSKDIEERLGGSDHRRRRDPSGAGR
QEITDCRLALLHFLDFNQKQSFNKLSKLRKEQKSLPIFQYRDRIVELVRTHPVVLVAGDT
GCGKSTQVPQYLLASGFEHIACTQPRRIACISLAKRVSFESLNQYGSKVGYQIRFEASRT
TATKLLFLTEGLLLRQIQRDASLGQYQVLILDEVHERHLHCDFLLGVLRSLLPLRPDLRL
VLMSATINIKLFSSYFNSAPVLQVPGRLFPIQVIYQPIPPEEQGSRSEKLDPRPYLRVLQ
GIDQRYPPEERGDLLLFLSGVAEISTIQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFD
IAPPGVRKCIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQ
RKGRAGRTGPGVCYRLYSESDYDAFASYAVPEIHRVALDSLILQMKSMGLGDPRSFPFID
PPPASSIQTAVMYLKEQGALDEHGELTPIGQLLAQLPVDVVIGKMLVLGSVFNLVEPVLT
VAAALSVQSPFLRSAQHNPDCSTTRQPLNSSQGDPFTLMNTFNAWVQVKADRGSGSRKWC
RRRGLEEQRLYEMVNLRRQFKELLRSHGLLEADPGSRREPQDRVRRRERLTERQKLHQLK
RDHDLQESTKRKVLRLEEGLEGDLSGSDDEGAGTSKKRREDAEQTVDIQEVKFKLRHNVN
ELQEAAYASADLSSRQQTLLKLVLCRGLYPQLAIPDEHNATRKDSEQVFHTRNKQGVVIH
PTSVFASDPEVLHVSEHESSEFGADKGQSNRHQLLAFVTLLETNKPYISNCLRVPALQAL
LLVASSVDSNADCTRVVLDGWLELGLMDGNSALKVLSSALGLRGEWERLLQLQIGQGGLG
TGGPKVSRKELDKLCEGLVRFLLYTEVSYSLRRLTALQSSNLYIGPQLDPDLSSASAIGS
LFPGMKAEPDPIKGGLRLCSYFTYNCLCDSKDLYSECLRTFWTCPQCDLYMPLTPLERMQ
HEAICRPPEEQQPEDESESVQTSSSSSSGLTRVYHCDICNKDLTLTSTEILKHKRQHLS
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgagcgagaggagagtcggagctgggactgggacagtcctcggtgtcgagcc
cagctggacgaggtgtttttccgccatcacgactacatccagacgggcagcgccgaacac
aaggagttctggagcttctttgagcgcttccagagattcagagccaagaaagagatgtca
gccgccagatccagcaaacaggagtcacacaggaagaagtctggatctgtggatctgggg
cttccgagggagtatgatgccaggtacaggatcaacatctccgtgtgctccaaagacata
gaggagcggctgggaggatcagatcacaggaggcgcagggatccctctggagccggcaga
caggagatcacagactgccgtctcgccctcctccacttcctagacttcaaccagaagcag
agcttcaacaagctgtccaagctgaggaaggagcagaagagcctccctatcttccagtac
cgggacaggatcgtggagctggtgcggactcatccggtggtgctggtggctggagacacg
ggctgtgggaagtccacacaggtgccgcagtatctgctggcctcagggttcgagcacatc
gcctgcactcagcctcgccgcatcgcctgcatctcactggccaagagagtcagctttgag
agcctcaaccagtacggctccaaggttgggtaccagatccgctttgaggccagccgcacc
acagctaccaaactgctgttcctgaccgagggtctcctgctccggcagatccagcgggac
gcttccctgggacagtaccaggtgctgatcctggacgaggtgcacgagagacacctgcac
tgtgacttcctgctgggagtgctgcgctcccttctgcccctgcgtccagacctgcggctg
gtcctcatgtcggccaccatcaacatcaaactcttctccagctacttcaacagcgcacct
gttctgcaggtgccaggcagactcttccccattcaggtgatctaccagcccattcctcca
gaagagcaggggtcccgctcggagaaactggacccacggccgtacctgcgtgtgctgcag
ggtattgaccagcggtacccgccggaggagagaggagacctgctgctgttcctcagcgga
gtggcggagatctccaccatccaggaggcctgtcagacatacgccacacacactcagcgc
tggatcgtcctccctctgcacagcaccctctctctggcccagcaggataaggtgtttgac
attgcacccccgggtgtgagaaagtgcatcatttctaccaatattgctgagacctcagtc
actatagatggagtgcgctttgtggtcgattcaggaaaggtgaaagagatgagctttgac
ccgaaggccaagatgcagcggctgcaggagttctggatcagcagggccagttctgaacag
aggaagggacgagctggcagaactggaccgggagtctgttaccgactctactctgaatct
gactacgacgccttcgcctcgtatgctgttcctgagatccacagggtggcgctcgactcc
ctcatcctacagatgaagagcatgggtttgggtgaccctcgcagttttcccttcatagac
cctcctcctgcttctagtattcagactgcagtgatgtatctgaaagaacagggggctctg
gatgaacacggggaactcactcctattggccagctgctggctcaactgcccgtggatgtg
gtcattggaaaaatgttagttttgggatcagtctttaacctggtggagccagtgttgacg
gtcgccgctgcgctgagtgtccagtctccatttctgcgcagtgctcagcacaaccctgac
tgctccaccactcgccagcccctgaacagcagccagggagaccccttcactctgatgaac
acctttaatgcctgggtgcaggtgaaagcggacagaggaagtggttccagaaagtggtgc
aggaggagagggctggaggaacagaggctttacgagatggtcaacctcaggcgacagttc
aaagagctgctgcgctctcacggtctgctggaggcagatcccggcagcaggagagagccg
caggaccgagtccggcgcagagagagacttacggagagacagaagctccaccagctgaaa
cgagaccatgacctccaggagagcaccaagaggaaagttctgcgcctggaggaaggactg
gagggagacctgtctgggtctgacgatgagggagcaggaaccagcaagaagagaagagag
gatgctgaacagactgtggacatacaggaagtcaagttcaaattgcgtcacaatgtgaat
gagctgcaggaagctgcatacgccagtgcagatctgtcttcacggcagcagactctgctc
aagctggtgctgtgccgcggtctttacccacagctggccattccagatgagcacaacgca
acccgtaaagactccgagcaggtgttccacacgcgaaataaacaaggtgttgttatccac
ccaaccagcgtgtttgccagtgaccctgaagtcctgcatgtctctgagcacgagtccagc
gagtttggggctgataaaggccagagcaacaggcatcagttactggccttcgttactctg
ctagaaacaaacaagccttacatctccaactgtctgcgggttccagcactgcaggccctt
ctgctggtggccagctctgtggacagtaacgctgactgcacgcgggtggtgctggacgga
tggctggagctgggcttgatggacggaaactctgcgctgaaggtgctctcctcggccctc
ggtctgcggggtgaatgggagaggctgcttcagcttcagatcggacagggcggcctcggg
acaggcgggcccaaagtgtcccgcaaagaactagataaactctgtgagggactcgtacgg
tttctgttatacactgaggttagttacagtctgaggcgtctgacagcgctgcagtcttca
aacctttacatcggaccgcaactggatcccgatctgtcttccgcttcagctatcggctct
ctgtttcctggcatgaaagccgaaccagatcccattaaaggaggcctgcgtttgtgcagc
tactttacctacaactgtctgtgtgactctaaggacctatacagtgaatgtttacgcact
ttttggacctgccctcaatgtgacctctacatgcccctgactcctttggagcgcatgcag
cacgaggccatctgcaggccgccggaggaacagcagcctgaggacgagtctgaaagtgta
caaacatcctcatcatcttcatcaggtctgacaagggtctatcattgtgacatctgtaat
aaagacctgactctcacctcgacggagatccttaaacacaagcgccagcacctgtcctga
DBGET
integrated database retrieval system
