Carassius auratus (goldfish): 113073320
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Entry
113073320 CDS
T07313
Name
(RefSeq) homeobox-containing protein 1-like isoform X1
KO
K24885
homeobox-containing protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113073320
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113073320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
DUF494
HTH_37
HTH_31
HTH_26
Motif
Other DBs
NCBI-GeneID:
113073320
NCBI-ProteinID:
XP_026102003
Ensembl:
ENSCARG00000050531
UniProt:
A0A6P6N0A5
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MSHFTDEPRFTIEQIDLLQRLRRTGMTKPEIVHALDTLERLDREHGDKYSRRGPSDSNAT
TSSTTPTSNSTSNSATLTSSTTSTATQTQFHGNLSPSHNNSYATSPPAVLPSPVSLVATA
QNGRDALAMTPNGRLSPSHYPVNSAAAVRSYGLDGSEEDLDIDDKVEELMRRDSTLVKEE
IKAFLGNRRISQAVVAQVTGISQSRISHWLLQQGSDLSEQKKRAFYRWYQLEKTTPGATL
NMRPTPVSLDEMEWRQTPPPISSAPGSFRLRRGSRFTWRKECLAVMESYFSDNQYPDEAR
REEIANACNAVIQKPGKKLSDLERVTSLKVYNWFANRRKEIKRRANIGSFFQEATILESH
GIEVQSPGGHSNSDDVDTNDYNEQGCDVSYFEKRGMNRPFGYYRLEPTSPTQDDTSNHAD
HQDPISLAVEMAAVNHSILALSRPGGVASEIKTESLDDD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacttcacagatgagccacgcttcaccatcgaacagatcgacctgctccagaga
ctgcggcgtacaggtatgaccaaacctgagatcgtgcacgcgctggacaccctggagcga
ctcgaccgcgagcacggggacaaatacagccggcgcggcccgtcggactccaacgccacc
acctcaagcactacacccacctcaaatagcactagcaactccgctacgttgacctcctcc
accacttccacagcaacgcaaacacagttccacggtaatttatcgccgtcgcacaacaac
agctacgccacgtctccacccgcagtcttaccctcgcccgtctctctggtcgccacggca
cagaacgggcgggacgctttggcgatgacacccaatgggagattgtcgcccagccattac
ccagtgaacagtgcggcagcggtgaggtcgtacgggctggacgggtcagaggaggacctg
gatatagatgacaaggtggaggagctcatgaggagagacagcaccctggtgaaggaggaa
atcaaagcctttttgggcaacagacgcatctcacaggccgtggtggctcaggtcacaggc
atcagtcagagcagaatctctcactggcttctccagcagggctcagatctcagcgaacag
aagaaacgagctttctatcgctggtaccagctggagaagacaacgccaggtgccacatta
aatatgcgtcccacccctgtatctctggatgagatggagtggcgtcagactccgcccccc
ataagctccgcccccggaagcttccgtttgcgcagaggcagtcgattcacctggaggaag
gaatgtctcgctgtgatggagagctatttcagtgataatcaatatccagatgaagccaga
cgagaggagatcgcaaacgcctgcaacgctgttattcagaaaccaggaaagaagttgtct
gacttggaaagagtcacgtccttgaaagtctacaattggtttgccaaccgacgcaaagag
atcaagaggagggccaatattgggtcttttttccaagaagccacaatcttggagagtcac
gggatcgaggtgcagagtcccggaggacactccaacagtgacgacgtcgacaccaacgac
tacaacgagcagggttgtgacgtttcctattttgaaaagagaggcatgaacagacctttc
ggttactaccgtctggagcccacctcaccaacacaggatgacaccagtaatcacgcagac
caccaggaccccatctctctcgctgtggagatggcagctgtcaatcacagcatcctcgcc
ctgtcccgcccgggaggcgtggccagtgaaatcaaaacagagtcactggatgacgactga
DBGET
integrated database retrieval system
