KEGG   Carassius auratus (goldfish): 113073942
Entry
113073942         CDS       T07313                                 
Name
(RefSeq) tenascin-like isoform X1
  KO
K06252  tenascin
Organism
caua  Carassius auratus (goldfish)
Pathway
caua04510  Focal adhesion
caua04512  ECM-receptor interaction
caua04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:caua00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    113073942
   04518 Integrin signaling
    113073942
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    113073942
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:caua00536]
    113073942
Glycosaminoglycan binding proteins [BR:caua00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   113073942
SSDB
Motif
Pfam: fn3 EGF_TEN EGF_Teneurin Fibrinogen_C EGF_Tenascin EGF_2 DUF7949 Fn3_Dep-1_3rd FN3_DSCAM-DSCAML_C Pur_ac_phosph_N EGF NDNF fn3_2 hEGF Lzipper-MIP1 Big_5
Other DBs
NCBI-GeneID: 113073942
NCBI-ProteinID: XP_026102436
Ensembl: ENSCARG00000005446
UniProt: A0A6P6N0E9
LinkDB
Position
5:complement(9250427..9307823)
AA seq 1783 aa
MGMQGLLLACVAVAMLVHLSSAGLVKRVLRHRREYLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTPLKPKSANLQSDQHIEHTTDGENQIVFTHRINIPKQACSCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTGCCGAQVTAGEVTTKPYCSGRGNYSTETCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSIELCPVDCGENGECID
GACICAEGFIGEDCSLTNCLNNCLGRGRCVDDECVCEEPWTGFDCSELICPNDCFDRGRC
DNGTCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNTGYSGDDCSKLTCLNDCRQRG
HCFNGKCICDPGFEGEDCSILSCPDNCNGRGHCVNGECICGVGYKGDDCSELSCFNNCHD
RGRCVNGKCICKMGFTGEDCSIKTCHHDCHGHGECVDGKCVCHNGFAGDHCGIKTCPHDC
HGRGHCVDGKCVCHNGFAGQHCGIKTCPHDCHGHGQCVDGKCICRDGFAGEDCSIKTCPN
DCHERGQCVDGRCVCHAGFTGHDCSELTCPSDCHNRGRCVNGQCVCNIGFTGEDCGTKTC
PNNCLDRGYCEDGKCVCFEGYTSEDCSVLTCPANCNDQGQCLDGMCICDLSFTGDECSEI
SPPRDLTVTEVDPETVDLAWVNEMLVTEYLITYVPTAPGGLEMEMRVSGEKKTATIRELE
PGIEYLISVFAVLNSKMSVPVSARIATHLPEPEGLKFKSVRETSVEVEWDPLNIPFDGWN
LIFRNTKEEDGEILNSLTPPETTFEQSGLGPGQEYEVKLEVVKNNTRGPPASKNVVTMID
APSQVDVRDVTDTTALITWFQPVAQVDAISVSYGPNTDSSDRKTIKLSSMDTQYHLAELY
PDTEYEVSLMARRGEMTSFPIYETFTTDLDAPKHLKAAEQTDESITLEWKNSRANVLNYR
VKYGPLSGGEHGELVFPSGPQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVTD
LDAPKDLEVSETTETTLTLVWRRPVAKIDTYELVFTSADGTETELEVPGADNTYILTDLN
PGMLYTISLTAKRGRKMSAPATLSASTDEEKPQVGNITISDVSWDSFSVSWELDRGEVEG
FLVEVSGPDDLSNGQNHTLSSQEFSLAVTDLSPSTFYRVVLYGLYKGELLDPVFAEAITE
DEPEVEHLSVSDITPHSFKLTWTAPEDIFDTFTLKVVDSNRLGKPLQISVSGDKRTEAVT
GLTEDTKYEIQLFGIILGQKFRPILTVARTGLGTPKGIRFSDVTDTSAAVHWILPRNRVD
SYRVTYVPIQGGSPMTLRVDGGESQAMLPSLTPGVTYQVTVIAVKGLEESEPGSDRVTTA
LDKPRGLTAVNITDTEALLLWQPSIATVDGYVITYSADSVAPVMERVSGNTVEFGMSSLT
PATLYTVKVYAVREAAKSAATTTEFTTDVDAPQNLAVSNIQTESAMLTWKPPRADISGYI
LSYESTDGIVKEVVLSPTATFYSMSPLTSSTEYTVKLQAIAGPKRSRIISTVFTTIGVLY
KLPKDCSQTLLNGETTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFR
NWKNYTAGFGDLNDEFWLGLSNLHKITSSGQYELRVDLRDKGESAYAQYDKFSVSEPRSR
YKVHVGGYSGTAGDSMTYHHGRPFSTYDNDHDIAVTNCALSYKGAFWYKNCHRVNIMGRY
GDNSHSKGVNWFHWKGHEHSIEFAEMKIRPANFRNFEGRRKRS
NT seq 5352 nt   +upstreamnt  +downstreamnt
atggggatgcaaggcctgctactggcctgtgtggcagtagccatgttagttcatctatct
agtgctggcctggtgaaaagagtacttagacacagaagagaatatctgtcaccaaccacg
gagaacttgaccctcccaagccccgatcagcctgtggtttttaaccatgtatacaacatc
aatgttccttctggatccctgtgctctgtggacttggattcacctggaacaacaccattg
aagccaaaatcggccaatctgcagtctgaccaacacatagaacacaccacggatggagag
aatcaaattgttttcacgcataggattaacattcccaagcaagcttgtagttgtgataac
cacatgcccgacctgaaggatcttctgaacaggctggaaatgctggaggcagaggtatcc
agtctaagagagcagtgcaccagcggaacaggctgctgtggtgctcaggttacagcaggt
gaagtcacaacaaaaccctactgcagtggccgtggcaactacagcactgagacctgcagc
tgtgtgtgtgagcccggttggaagggagtcaactgctctgagccagaatgcccgaacttt
tgccaggatcaaggccgttgtgaagacggcaagtgtgtctgcttcgagggcttcggtggc
gaggactgcagcatcgagctttgccctgtggattgcggtgagaatggagaatgtatcgac
ggagcttgcatatgtgcagagggctttatcggtgaggactgcagtttgaccaactgccta
aacaactgccttggcagggggcgctgtgtggatgacgaatgtgtatgtgaagagccttgg
acgggctttgactgctccgaactcatctgtcccaacgactgctttgaccgtggccgctgt
gacaatggaacctgctactgtgaagagggttttactggggaagactgtggggaacttacc
tgccccaaaaactgcaaccaccgtggcaggtgtgtcaatggacagtgtgtctgcaatact
ggctacagcggagatgactgctccaagctaacctgtctcaatgactgcagacagagaggg
cactgcttcaatgggaagtgcatttgtgaccctgggttcgagggcgaggactgtagcatt
ctttcctgccctgacaactgcaatggcaggggacattgcgtaaatggtgagtgtatttgt
ggtgttggctataaaggtgatgactgctctgagctttcttgcttcaataactgtcatgat
cgtggccgatgtgtcaacgggaagtgcatttgcaaaatgggctttactggagaagactgc
agcatcaagacctgtcatcatgactgccatggacacggagagtgtgtagacggcaaatgc
gtttgccataatggctttgctggagatcactgtggcatcaagacctgtccccatgactgc
catggacgtggacattgtgtagacggcaaatgcgtttgccataatggctttgctggacaa
cactgtggcatcaagacctgtccccatgactgccatggacatgggcagtgtgtagatggc
aagtgcatttgccgtgatggttttgctggagaggattgcagcatcaaaacctgtcccaat
gactgccatgagcgtggacagtgcgtggatggcaggtgtgtttgccatgctggttttact
ggccatgactgcagcgagttgacttgccccagtgactgccataaccgaggacgttgtgta
aatggtcaatgtgtttgtaacattggattcactggggaggactgtggtacaaagacgtgt
cccaataactgcctggaccgtggctactgtgaagatggaaagtgtgtctgctttgagggg
tacaccagtgaagactgctctgttctgacatgcccagcaaactgcaatgaccaaggccag
tgtctggatggaatgtgcatatgtgatttaagcttcactggcgacgagtgctctgaaatc
tccccacccagagacctgactgtgactgaggtcgatccagaaacagtggaccttgcctgg
gtcaatgagatgcttgtgacggagtatcttatcacctatgtgcctacggctcctggtggc
ttggagatggaaatgagagtctctggtgaaaagaagacagccactattagggagcttgag
cctggcatagagtacctaatcagtgtatttgctgtcctgaacagcaagatgagtgtccct
gtcagtgccagaatagccacacatcttcctgaacccgagggtctgaaattcaaatcagtt
agagagacctcagtggaggtggagtgggaccccttgaacatcccgtttgatggctggaac
ctcatcttcagaaacacaaaagaagaagatggagagattttgaactctcttacccctcct
gagaccacctttgagcagtctggtcttggacctggacaagagtatgaagtcaagcttgag
gtcgtaaagaacaacacccgtggacccccagccagcaagaacgtggtcacaatgattgat
gctcccagccaggtggatgtgcgtgatgtgacagacactacagcccttatcacctggttt
cagcctgtcgctcaggtggatgccatctctgtgtcctacggcccaaacacagattcctca
gacaggaaaacaatcaagctttcctccatggatacacagtaccatcttgctgagctgtac
cctgacacagagtatgaggtctctctcatggcccgcaggggagagatgaccagctttcca
atctatgagaccttcactacagaccttgatgccccaaagcacctcaaggcagctgaacag
acagatgagagcataactctggagtggaaaaacagcagagccaatgtcctcaattaccgg
gtcaaatatggcccactttctggaggggagcatggagaactggtcttccccagcggcccg
caagacaccactcaggctaaaatcactggccttaggcccgggacggagtatggaatggga
gtgacatcaatcaaggaagagcgtgagagtttgcctgcgacgaccaatgctgtgactgat
cttgatgcccccaaagaccttgaagtaagtgagaccacagagaccacattgacactggtt
tggaggaggccggtcgccaaaatcgacacctatgagctggtgttcacatctgcggatggc
acagaaactgaattggaggttcctggtgctgacaatacatacatcctgactgacctgaat
cccggcatgctgtacaccattagccttactgccaagagaggaagaaagatgagtgcgcca
gccacactgtcagcatccacagatgaagagaagcctcaggtgggcaacatcaccatctct
gatgtgtcctgggacagcttcagtgtgtcctgggagctggacagaggagaggttgagggc
tttttggttgaagtatctggcccagatgacttatctaatggccagaaccatacactatcc
agccaggagttcagcctggctgtcactgacctctccccaagtactttctacagagtcgtt
ctgtatgggctgtacaagggagagctcttagatcctgtctttgctgaagccatcacagaa
gacgaacctgaagtggagcatctttcggtctcggacatcaccccgcacagctttaaactg
acatggacagcaccagaagacatcttcgatacattcactctcaaagtcgtcgattcgaac
agactgggaaaacctctccagatcagtgtatctggagacaagcgaacagaagcggtgaca
ggtctcaccgaagatacaaagtatgaaatccagctctttgggatcattttgggacagaaa
ttccggcccattttgaccgtagctcgaacaggtctgggaacacccaaggggatacgcttt
tctgatgtgacagacacatcggctgctgttcactggattttgccccgtaaccgtgtagac
agctaccgggtcacctacgtgcccattcaggggggaagccctatgacactgagagtagat
ggaggggagtcccaagccatgctgcccagtctgacccctggagtaacctaccaggtcact
gtcatcgctgtgaagggcttggaggagagtgaaccaggatctgatagagtcaccacagcc
ctggataagccacgaggtctgacagcagtcaacatcaccgacactgaagctctgctgctg
tggcagccgtccatcgctactgtggatggatatgtcatcacttacagcgcagacagtgtg
gctccagtgatggaacgggtgtctgggaacactgtggagtttgggatgagctcactcaca
cctgccactttatacaccgttaaagtctatgctgtcagagaagcagccaagagtgctgca
accaccacagagttcaccacggatgttgatgcccctcagaatctggctgtcagtaatatt
caaacagagagcgccatgttgacatggaagccaccaagagcagacatcagcgggtatatc
ctcagctatgagtccactgatggcattgtcaaggaggtcgtcctcagccccacagcaaca
ttttacagcatgtctccgctgacttcctccacagagtacacagtcaaactgcaggccatc
gctgggccgaagagaagcagaatcatctctacagtcttcaccaccatcggagtgctgtac
aagcttcctaaagactgctcgcagactctgttaaatggagaaacaacctcaggcctgtac
acgatttacctgcgtggagatgagtctcagcctctgcaggtctactgtgatatgaccaca
gatggagggggctggattgtttttgtgagacggcagagcggtaaagtggagtttttcaga
aactggaagaactacactgcaggctttggcgacctgaatgatgaattctggttgggactc
tctaacctgcataagatcacctcctctgggcagtatgagctgcgtgtggacctcagagat
aagggcgagtctgcgtatgcgcagtatgacaagttttcagtctctgaaccacgcagtcgc
tacaaagtgcatgttggaggatacagcggcactgcaggtgactcaatgacgtatcaccat
ggccgtccattctcaacctatgataatgaccacgatatagcggtcacaaactgcgctctg
tcttataagggggctttctggtacaagaactgtcatcgagtgaatataatgggccgatat
ggagacaacagtcatagcaagggtgtgaactggttccactggaagggtcatgagcattcc
atcgagtttgcagaaatgaagatcaggcccgccaacttcaggaattttgagggaaggaga
aagcgatcgtaa

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