Carassius auratus (goldfish): 113073942
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Entry
113073942 CDS
T07313
Name
(RefSeq) tenascin-like isoform X1
KO
K06252
tenascin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113073942
04518 Integrin signaling
113073942
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113073942
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113073942
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113073942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_Tenascin
EGF_2
DUF7949
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
EGF
NDNF
fn3_2
hEGF
Lzipper-MIP1
Big_5
Motif
Other DBs
NCBI-GeneID:
113073942
NCBI-ProteinID:
XP_026102436
Ensembl:
ENSCARG00000005446
UniProt:
A0A6P6N0E9
LinkDB
All DBs
Position
5:complement(9250427..9307823)
Genome browser
AA seq
1783 aa
AA seq
DB search
MGMQGLLLACVAVAMLVHLSSAGLVKRVLRHRREYLSPTTENLTLPSPDQPVVFNHVYNI
NVPSGSLCSVDLDSPGTTPLKPKSANLQSDQHIEHTTDGENQIVFTHRINIPKQACSCDN
HMPDLKDLLNRLEMLEAEVSSLREQCTSGTGCCGAQVTAGEVTTKPYCSGRGNYSTETCS
CVCEPGWKGVNCSEPECPNFCQDQGRCEDGKCVCFEGFGGEDCSIELCPVDCGENGECID
GACICAEGFIGEDCSLTNCLNNCLGRGRCVDDECVCEEPWTGFDCSELICPNDCFDRGRC
DNGTCYCEEGFTGEDCGELTCPKNCNHRGRCVNGQCVCNTGYSGDDCSKLTCLNDCRQRG
HCFNGKCICDPGFEGEDCSILSCPDNCNGRGHCVNGECICGVGYKGDDCSELSCFNNCHD
RGRCVNGKCICKMGFTGEDCSIKTCHHDCHGHGECVDGKCVCHNGFAGDHCGIKTCPHDC
HGRGHCVDGKCVCHNGFAGQHCGIKTCPHDCHGHGQCVDGKCICRDGFAGEDCSIKTCPN
DCHERGQCVDGRCVCHAGFTGHDCSELTCPSDCHNRGRCVNGQCVCNIGFTGEDCGTKTC
PNNCLDRGYCEDGKCVCFEGYTSEDCSVLTCPANCNDQGQCLDGMCICDLSFTGDECSEI
SPPRDLTVTEVDPETVDLAWVNEMLVTEYLITYVPTAPGGLEMEMRVSGEKKTATIRELE
PGIEYLISVFAVLNSKMSVPVSARIATHLPEPEGLKFKSVRETSVEVEWDPLNIPFDGWN
LIFRNTKEEDGEILNSLTPPETTFEQSGLGPGQEYEVKLEVVKNNTRGPPASKNVVTMID
APSQVDVRDVTDTTALITWFQPVAQVDAISVSYGPNTDSSDRKTIKLSSMDTQYHLAELY
PDTEYEVSLMARRGEMTSFPIYETFTTDLDAPKHLKAAEQTDESITLEWKNSRANVLNYR
VKYGPLSGGEHGELVFPSGPQDTTQAKITGLRPGTEYGMGVTSIKEERESLPATTNAVTD
LDAPKDLEVSETTETTLTLVWRRPVAKIDTYELVFTSADGTETELEVPGADNTYILTDLN
PGMLYTISLTAKRGRKMSAPATLSASTDEEKPQVGNITISDVSWDSFSVSWELDRGEVEG
FLVEVSGPDDLSNGQNHTLSSQEFSLAVTDLSPSTFYRVVLYGLYKGELLDPVFAEAITE
DEPEVEHLSVSDITPHSFKLTWTAPEDIFDTFTLKVVDSNRLGKPLQISVSGDKRTEAVT
GLTEDTKYEIQLFGIILGQKFRPILTVARTGLGTPKGIRFSDVTDTSAAVHWILPRNRVD
SYRVTYVPIQGGSPMTLRVDGGESQAMLPSLTPGVTYQVTVIAVKGLEESEPGSDRVTTA
LDKPRGLTAVNITDTEALLLWQPSIATVDGYVITYSADSVAPVMERVSGNTVEFGMSSLT
PATLYTVKVYAVREAAKSAATTTEFTTDVDAPQNLAVSNIQTESAMLTWKPPRADISGYI
LSYESTDGIVKEVVLSPTATFYSMSPLTSSTEYTVKLQAIAGPKRSRIISTVFTTIGVLY
KLPKDCSQTLLNGETTSGLYTIYLRGDESQPLQVYCDMTTDGGGWIVFVRRQSGKVEFFR
NWKNYTAGFGDLNDEFWLGLSNLHKITSSGQYELRVDLRDKGESAYAQYDKFSVSEPRSR
YKVHVGGYSGTAGDSMTYHHGRPFSTYDNDHDIAVTNCALSYKGAFWYKNCHRVNIMGRY
GDNSHSKGVNWFHWKGHEHSIEFAEMKIRPANFRNFEGRRKRS
NT seq
5352 nt
NT seq
+upstream
nt +downstream
nt
atggggatgcaaggcctgctactggcctgtgtggcagtagccatgttagttcatctatct
agtgctggcctggtgaaaagagtacttagacacagaagagaatatctgtcaccaaccacg
gagaacttgaccctcccaagccccgatcagcctgtggtttttaaccatgtatacaacatc
aatgttccttctggatccctgtgctctgtggacttggattcacctggaacaacaccattg
aagccaaaatcggccaatctgcagtctgaccaacacatagaacacaccacggatggagag
aatcaaattgttttcacgcataggattaacattcccaagcaagcttgtagttgtgataac
cacatgcccgacctgaaggatcttctgaacaggctggaaatgctggaggcagaggtatcc
agtctaagagagcagtgcaccagcggaacaggctgctgtggtgctcaggttacagcaggt
gaagtcacaacaaaaccctactgcagtggccgtggcaactacagcactgagacctgcagc
tgtgtgtgtgagcccggttggaagggagtcaactgctctgagccagaatgcccgaacttt
tgccaggatcaaggccgttgtgaagacggcaagtgtgtctgcttcgagggcttcggtggc
gaggactgcagcatcgagctttgccctgtggattgcggtgagaatggagaatgtatcgac
ggagcttgcatatgtgcagagggctttatcggtgaggactgcagtttgaccaactgccta
aacaactgccttggcagggggcgctgtgtggatgacgaatgtgtatgtgaagagccttgg
acgggctttgactgctccgaactcatctgtcccaacgactgctttgaccgtggccgctgt
gacaatggaacctgctactgtgaagagggttttactggggaagactgtggggaacttacc
tgccccaaaaactgcaaccaccgtggcaggtgtgtcaatggacagtgtgtctgcaatact
ggctacagcggagatgactgctccaagctaacctgtctcaatgactgcagacagagaggg
cactgcttcaatgggaagtgcatttgtgaccctgggttcgagggcgaggactgtagcatt
ctttcctgccctgacaactgcaatggcaggggacattgcgtaaatggtgagtgtatttgt
ggtgttggctataaaggtgatgactgctctgagctttcttgcttcaataactgtcatgat
cgtggccgatgtgtcaacgggaagtgcatttgcaaaatgggctttactggagaagactgc
agcatcaagacctgtcatcatgactgccatggacacggagagtgtgtagacggcaaatgc
gtttgccataatggctttgctggagatcactgtggcatcaagacctgtccccatgactgc
catggacgtggacattgtgtagacggcaaatgcgtttgccataatggctttgctggacaa
cactgtggcatcaagacctgtccccatgactgccatggacatgggcagtgtgtagatggc
aagtgcatttgccgtgatggttttgctggagaggattgcagcatcaaaacctgtcccaat
gactgccatgagcgtggacagtgcgtggatggcaggtgtgtttgccatgctggttttact
ggccatgactgcagcgagttgacttgccccagtgactgccataaccgaggacgttgtgta
aatggtcaatgtgtttgtaacattggattcactggggaggactgtggtacaaagacgtgt
cccaataactgcctggaccgtggctactgtgaagatggaaagtgtgtctgctttgagggg
tacaccagtgaagactgctctgttctgacatgcccagcaaactgcaatgaccaaggccag
tgtctggatggaatgtgcatatgtgatttaagcttcactggcgacgagtgctctgaaatc
tccccacccagagacctgactgtgactgaggtcgatccagaaacagtggaccttgcctgg
gtcaatgagatgcttgtgacggagtatcttatcacctatgtgcctacggctcctggtggc
ttggagatggaaatgagagtctctggtgaaaagaagacagccactattagggagcttgag
cctggcatagagtacctaatcagtgtatttgctgtcctgaacagcaagatgagtgtccct
gtcagtgccagaatagccacacatcttcctgaacccgagggtctgaaattcaaatcagtt
agagagacctcagtggaggtggagtgggaccccttgaacatcccgtttgatggctggaac
ctcatcttcagaaacacaaaagaagaagatggagagattttgaactctcttacccctcct
gagaccacctttgagcagtctggtcttggacctggacaagagtatgaagtcaagcttgag
gtcgtaaagaacaacacccgtggacccccagccagcaagaacgtggtcacaatgattgat
gctcccagccaggtggatgtgcgtgatgtgacagacactacagcccttatcacctggttt
cagcctgtcgctcaggtggatgccatctctgtgtcctacggcccaaacacagattcctca
gacaggaaaacaatcaagctttcctccatggatacacagtaccatcttgctgagctgtac
cctgacacagagtatgaggtctctctcatggcccgcaggggagagatgaccagctttcca
atctatgagaccttcactacagaccttgatgccccaaagcacctcaaggcagctgaacag
acagatgagagcataactctggagtggaaaaacagcagagccaatgtcctcaattaccgg
gtcaaatatggcccactttctggaggggagcatggagaactggtcttccccagcggcccg
caagacaccactcaggctaaaatcactggccttaggcccgggacggagtatggaatggga
gtgacatcaatcaaggaagagcgtgagagtttgcctgcgacgaccaatgctgtgactgat
cttgatgcccccaaagaccttgaagtaagtgagaccacagagaccacattgacactggtt
tggaggaggccggtcgccaaaatcgacacctatgagctggtgttcacatctgcggatggc
acagaaactgaattggaggttcctggtgctgacaatacatacatcctgactgacctgaat
cccggcatgctgtacaccattagccttactgccaagagaggaagaaagatgagtgcgcca
gccacactgtcagcatccacagatgaagagaagcctcaggtgggcaacatcaccatctct
gatgtgtcctgggacagcttcagtgtgtcctgggagctggacagaggagaggttgagggc
tttttggttgaagtatctggcccagatgacttatctaatggccagaaccatacactatcc
agccaggagttcagcctggctgtcactgacctctccccaagtactttctacagagtcgtt
ctgtatgggctgtacaagggagagctcttagatcctgtctttgctgaagccatcacagaa
gacgaacctgaagtggagcatctttcggtctcggacatcaccccgcacagctttaaactg
acatggacagcaccagaagacatcttcgatacattcactctcaaagtcgtcgattcgaac
agactgggaaaacctctccagatcagtgtatctggagacaagcgaacagaagcggtgaca
ggtctcaccgaagatacaaagtatgaaatccagctctttgggatcattttgggacagaaa
ttccggcccattttgaccgtagctcgaacaggtctgggaacacccaaggggatacgcttt
tctgatgtgacagacacatcggctgctgttcactggattttgccccgtaaccgtgtagac
agctaccgggtcacctacgtgcccattcaggggggaagccctatgacactgagagtagat
ggaggggagtcccaagccatgctgcccagtctgacccctggagtaacctaccaggtcact
gtcatcgctgtgaagggcttggaggagagtgaaccaggatctgatagagtcaccacagcc
ctggataagccacgaggtctgacagcagtcaacatcaccgacactgaagctctgctgctg
tggcagccgtccatcgctactgtggatggatatgtcatcacttacagcgcagacagtgtg
gctccagtgatggaacgggtgtctgggaacactgtggagtttgggatgagctcactcaca
cctgccactttatacaccgttaaagtctatgctgtcagagaagcagccaagagtgctgca
accaccacagagttcaccacggatgttgatgcccctcagaatctggctgtcagtaatatt
caaacagagagcgccatgttgacatggaagccaccaagagcagacatcagcgggtatatc
ctcagctatgagtccactgatggcattgtcaaggaggtcgtcctcagccccacagcaaca
ttttacagcatgtctccgctgacttcctccacagagtacacagtcaaactgcaggccatc
gctgggccgaagagaagcagaatcatctctacagtcttcaccaccatcggagtgctgtac
aagcttcctaaagactgctcgcagactctgttaaatggagaaacaacctcaggcctgtac
acgatttacctgcgtggagatgagtctcagcctctgcaggtctactgtgatatgaccaca
gatggagggggctggattgtttttgtgagacggcagagcggtaaagtggagtttttcaga
aactggaagaactacactgcaggctttggcgacctgaatgatgaattctggttgggactc
tctaacctgcataagatcacctcctctgggcagtatgagctgcgtgtggacctcagagat
aagggcgagtctgcgtatgcgcagtatgacaagttttcagtctctgaaccacgcagtcgc
tacaaagtgcatgttggaggatacagcggcactgcaggtgactcaatgacgtatcaccat
ggccgtccattctcaacctatgataatgaccacgatatagcggtcacaaactgcgctctg
tcttataagggggctttctggtacaagaactgtcatcgagtgaatataatgggccgatat
ggagacaacagtcatagcaagggtgtgaactggttccactggaagggtcatgagcattcc
atcgagtttgcagaaatgaagatcaggcccgccaacttcaggaattttgagggaaggaga
aagcgatcgtaa
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integrated database retrieval system