Carassius auratus (goldfish): 113074180
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Entry
113074180 CDS
T07313
Name
(RefSeq) probable voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
113074180
04020 Calcium signaling pathway
113074180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113074180
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113074180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
113074180
NCBI-ProteinID:
XP_026102723
Ensembl:
ENSCARG00000013292
UniProt:
A0A6P6N2L9
LinkDB
All DBs
Position
5:complement(9560731..9649260)
Genome browser
AA seq
2331 aa
AA seq
DB search
MARFEDDLPTRYGGGGSPAGPCRGVSRQPGPPAGQRMYKQTMAQRARTMAIYNPIPVKQN
CLSVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIAQGFAFHKDSYLRNGWNVMDFVVVLTGILTVVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMG
KFHRTCFRNDTGEQAADFPCGTELPARMCEGDTVCRLYWTGPNFGITNFDNILFAVLTVF
QCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVILAEEDKNAEEKDDGAWYKRKCNNPVLKRA
KKSKNDLISAEEGEDHFTDITSVAPQGSPFTRTSKSSKNESSSYLRRKEKRFRFLIRRMV
KAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLGPR
TYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNLV
VSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQI
LTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQELT
KDEEEQEEAISKKMALQKAKEVKEVSPISAANISITAFIRPNPALSCSSSNSSSHSPKEQ
QRSLKMMSVWEQRTTQIRKHIRASSEALYQEELSPRLTTNLHLRPDMKTHLDRPLVVEPR
CDGPISTHRGWDKPQDLQGEGDTPRKHHRHRERPSNETSENGDTGQHKEGRHHVHHSRSK
EHDGRRCKEGKSDRSRSREGGRRHHHQSSVDEGGGEREHRHHHSHRHNREGNGVVSAGGK
NERRSRQKDGSHSETREGERCSRGENGDNGGRRQHRLCTSKAQSTLEGEEKQGNEEKEEG
KSHSHRHMDMTGDSLVVNPHQPSVGNRLCPEKPEDSDNKQKIGQTGGMGTHIPVTITSPP
GETTLIPMNSIDSETMPMTEKNLEDLNQSSHRPILHFSSMFIFSPNNPVRRLCHYIVSLR
YFEMCILVVISMSSIALAAEDPVQANAPRNNVLKYLDYVFTGVFTFEMVIKMVDLGLLLH
PGSYFRDLWNILDFIVVSGALGAFAFSSFMGSHLNINRGTKGKDISTIKSLRVLRVLRPL
KTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLE
KDCRGLFLDYDKDEVAAQPREWRKYEFHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATF
EDLGPSPGYRMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKALSECSLEKNERAC
IDFAINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIALNTVVLMMKFHGAPESY
EAMLKYLNIVFTALFSMECILKIIAFGPLNYLKDAWNVFDFVTVLGSITDILVTEINTTD
RLLNLSFLRLFRAARLVKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQ
VFGNIELSDDTAINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSERTCDASSGIQGK
ECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYD
PAACGRIKYLDMYEMLLHMCPPLGLGKKCPPRIAYKRLVKMNMPIAEDNSVHFTSTLMAL
IRTALEIKLASGMVAQRLSDAELKKELATVWPSLSQKTMDLLVTPHKPNELTVGKVYAAL
MIFDYYKQNRAKRLQMQQQREQAGPGSQNKVSALLEPILPLTHMQDQTMNSVESASEFQA
QTRPSSTMLNNGRTHLDTIIKGSSTWASEKSKEVQWSKRRPMSRGQSEDASNANTAQESV
EMRKMENSANTVTSGSLEGQGRAVSMPKLNAEMQRSHSRHSPGTLLEPIPDSPMRRSAST
FAPQRPQEVNLNDYTLVKPVQERHHHHHHHHRCHHRRDRDKKQRSLDRSPTGQHKATGRA
ADPVQERSHDRGRSHERKHHSSSAEKQRYYSCDRYGSRENCPSKSAMASCATSPSEALEA
SLNKQGSGWAKGSPVLLTSGASTPSHGRRQLPQTPIAPRPSVAYRTANSSPVQFLVTQAG
LLPPSPGRMSRGLSEHNALLNSSSISSSPAPVSRINSEPFLGPPDHPAGPQPETYAVFQD
DPSPQMGHSPLTVGMKIVAIPPPPQQQFRRVPNGYHFTTGPGATKGRARRY
NT seq
6996 nt
NT seq
+upstream
nt +downstream
nt
atggctcggtttgaagacgatctcccgacccggtatggaggcggtggctctccagcgggt
ccatgcagaggggtcagccggcaaccgggccccccggccggacagaggatgtataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccgataccggtcaaacagaac
tgtctctcagtcaacagatcccttttcatcttcagcgaagataatatcattcgaaaatat
gcaaagaaaataacagagtggcctccatttgagtacatgattctcgccaccattatagca
aactgcattgtactgggcttagagcagcatttaccagctttagacaagacacccatgtca
aaacgactggatgacactgaaccctacttcatcggaatattttgcttcgaggccgggatc
aagatcatcgctcaaggctttgcttttcataaagactcctacctccgcaatgggtggaat
gtaatggattttgttgttgtgttgacggggattctaaccgtagtggggccagactttgat
ttgcggacactcagggcagtaagagtcttgcggccactcaaactcgtgtctggaattcca
agtctccaggtggttctgaagtccatcatgaaagcaatggttcctttgcttcagattggc
cttctgctcttttttgctatcctcatgtttgccatcattggtctagacttctacatgggc
aagtttcaccgcacctgcttcagaaacgatactggggaacaggcagctgactttccatgt
gggacggaacttccagcccggatgtgtgaaggcgacactgtttgtaggctgtactggacc
ggtccaaacttcggcataacaaactttgacaacatcctgtttgctgtgctcaccgtcttc
cagtgcatcactatggaaggatgggtcgacatcctttacaatgccaacgatgcctcaggg
aacacctggaactggctctacttcatcccactcatcatcatcggctctttcttcatgctc
aacttggttttgggggtgctgtcgggggagtttgcaaaggagagagagcgtgtggagaaa
aggcaggagttcctgaagcttcgcagacaacagcagatcgagagggagctgacgggctac
ctggagtggatctgcaaggcagaggaagtaatacttgctgaagaagataaaaatgcagag
gagaaggatgatggtgcctggtacaagaggaaatgcaacaacccagtattgaaaagagct
aagaagagcaaaaatgacctcatcagtgcagaggaaggagaagaccatttcactgacatc
acatcagtcgctccccagggctctccgttcacccgtacaagcaagagcagcaagaacgaa
agctcatcataccttcgcaggaaagagaagaggtttcgcttcttaatccgccgtatggtg
aaggcccagagcttctactggactgttctgtgtatagtgggactgaacacactgtgtgtg
gctatagttcactatgaccagcccgactggctcacatatgcactgtatttggcggagttt
gtattccttggtctgtttctaatagagatgagtctgaagatgtatggccttgggcccagg
acctactttcactcctcatttaactgctttgactttggggtgattgtgggtagcattttt
gaggtgatctgggcagcagtaaaaccaggagcctcttttggcattagtgtgttgcgagca
ctacgtttgctgaggatattcaaggttaccaagtattggaactcgttacggaatctggtg
gtgtctctgctcaactcaatgaagtccatcatcagtctcctgttcctgctgtttctcttc
atcgtagtgtttgctctgctaggaatgcagctcttcggaggacagtttaattttgaagat
gagaccccgacgaccaactttgacacattcccagctgctatcctgacagtgtttcagatt
ctgacaggagaggactggaatgctgtgatgtatcatggaattgaatcccagggaggagtg
caccggggaatgttctgctccgtgtacttcattgtgctcacattatttggaaactacact
ctccttaatgtctttttggccatcgctgttgataatcttgccaatgcacaggaactcacc
aaggatgaggaggagcaggaggaggccatcagtaagaaaatggctctgcagaaagccaag
gaggtaaaggaggtcagccccatatcggccgctaacatttccatcacagcttttataagg
ccaaatcctgctctttcatgcagctcctccaactccagctctcattcacctaaagaacag
cagcgctctctaaaaatgatgtccgtgtgggagcagcgcaccacacagattcggaagcac
atacgcgccagcagcgaggcattgtaccaagaagagctcagcccccggctgaccactaac
cttcacctccgccctgacatgaaaacccacctggaccggcctctggtggtggaacctcgt
tgtgatggtcccatcagtacccacagaggctgggacaaaccccaggatttgcaaggggag
ggcgacacaccacgcaagcaccaccgtcacagagagcgtccatccaatgagaccagtgaa
aatggtgacacaggtcaacacaaagaaggccggcatcacgtccatcacagccgcagtaag
gagcatgatgggagacggtgtaaagaggggaagagtgacaggagccggagcagagagggg
ggccgcagacatcaccaccagagctcagtggatgagggaggtggggagagagaacatcgt
caccatcattcccacaggcataacagagagggcaacggagtggtcagtgctggggggaag
aacgaacggcggtccaggcagaaggatggctcacattcggaaacaagggagggagagagg
tgctccaggggcgaaaatggagataatggagggaggagacagcacagactatgtaccagt
aaagctcagtccactctggaaggagaggagaaacaagggaatgaagagaaggaggagggc
aagtcgcacagccacagacacatggacatgacaggagattccctggttgtaaacccccat
caaccttcagttggaaaccgattgtgtcctgagaaaccagaagactcagacaataaacaa
aaaattggtcagactggaggaatgggcacacacatacctgtgaccatcacatctccccct
ggagaaacaacccttatacccatgaacagtatagacagtgagacgatgcccatgactgag
aagaatctggaggatctgaaccagagtagccatcgtcccatcctccacttcagctccatg
ttcatcttcagcccaaacaatccggtgaggcgtctgtgccactacattgtgagtctgcgc
tactttgagatgtgtatcctggtggtgatttccatgagcagtatagccctggctgcggag
gacccagtccaagccaatgcccctcgtaacaatgtcctgaagtatttggactatgtcttc
actggtgttttcacatttgagatggtcattaagatggtggatttaggtttattgctgcat
cctggttcatacttcagagatctgtggaatattctggacttcattgtggtcagtggtgca
ctgggggcattcgcattttcgagcttcatgggatcacatcttaacataaacagaggaacc
aagggcaaagacatcagcactatcaagtccctgagggttttgcgagtcttgcgaccactg
aagaccattaaacgtctaccgaaactgaaggccgtgtttgactgtgtggtgaactccctg
aagaacgtgttgaatatcctcattgtctacatcctgttcatgttcatctttgccgtcatt
gctgtgcagctcttcaagggcaagtttttctactgcacagacgagtccaaaggtctggag
aaagactgcagagggctgttcttggattatgataaagatgaagtagcagcccagcccaga
gagtggaggaaatatgagttccactacgacaatgtgctgtgggcgtttcttactctcttc
actgtttctactggagagggctggccaacggttttgaagcactctgtagatgccactttt
gaggacctgggtcctagtccaggctaccgcatggagatgtccatcttctacgtggtctac
tttgtggtcttccccttcttcttcgtcaacatttttgtggccttgataattatcacattc
caggaacagggcgataaggccttgtcagagtgcagtctggagaagaatgagagagcctgc
attgactttgctatcaatgccaaaccgttgacccgctatatgccacagaaccagcagtcc
tttcagtaccgcttgtggaagtttgtggtttctccaccgtttgagtactccatcatgatc
atgattgctctcaacactgtggtgctcatgatgaagttccatggggctcctgaatcttat
gaagcaatgctcaagtatctcaacattgttttcactgctctcttttcaatggagtgcatt
ctgaagattattgctttcgggcccttgaattacctgaaagacgcctggaatgtgtttgac
tttgtgactgtgctgggcagcatcactgacatcttagtcactgagattaacactacggac
cgtctgctgaacttgagtttcctgaggctcttcagagcagccagactcgtcaaactcctc
cggcagggatacaccatacgcatcctgctctggacattcgtccaatcgtttaaggcattg
ccttatgtttgccttctaattgccatgctgtttttcatctacgccatcataggaatgcag
gtgtttgggaacatcgagttgagtgatgataccgccatcaatcgtcacaacaactttcgc
actttcctccaagcgcttatgctgttgttcaggagtgctactggtgaagcctggcatgag
attatgctgtcctgtctgagtgagcgcacatgtgatgcgagctcaggcattcaaggaaag
gagtgcgggagtgactttgcctacttctactttgtctccttcattttcctctgttctttc
ctgatgctgaacctgtttgtggctgtcattatggacaactttgaatatctgacacgtgac
tcctccatcttgggccctcaccacctggacgagtttatccgagtgtgggcagagtatgac
ccagctgcatgtggccgtatcaagtacctcgatatgtatgagatgctgctccacatgtgc
ccacctttaggtttgggaaagaaatgccctccacgaatcgcctacaagcggctggtgaaa
atgaacatgcccattgcagaagacaacagtgtgcacttcacctctacactgatggctctg
atccgcactgccttagagatcaaactggcatcaggcatggtggcccaacgtctgtcagac
gctgaactgaagaaggagcttgctacagtctggccaagcctgtctcagaagactatggac
ctgctggtcactccacacaaacccaatgagcttacagtggggaaggtatatgcagctctt
atgatttttgattattacaaacaaaacagagccaaaagacttcagatgcagcagcaaaga
gaacaagcaggacctggatctcagaataaagtcagtgctcttttagagcctattctccca
ctaacccacatgcaagatcagaccatgaacagtgtagagtcggcctcagaatttcaagct
cagaccagacccagctccaccatgcttaataacggacgcacacatcttgataccataatt
aaaggatcttcaacctgggcttcagagaagtccaaggaagtgcagtggtctaaacggcgg
ccaatgtcaagaggtcaatcagaggatgcctcaaatgcaaacactgcccaggaatcagta
gaaatgaggaagatggagaacagtgccaacacagtgacctctggcagccttgaaggccaa
ggacgtgcagtatccatgccaaaactcaatgcagaaatgcagaggagtcattcccgtcat
tctcctgggactttactggaaccaattcccgattcccccatgagacgctccgcatccact
tttgcaccacagcgccctcaggaagtgaatctgaatgactacactttggtgaaacctgtt
caagaacgacatcaccaccatcaccatcaccaccgatgccatcatcgcagggacagagac
aagaaacagagatcgctggacaggtcgcccacaggccaacacaaagctacaggcagagcc
gctgaccctgtacaggagaggtcgcatgaccgaggtcgttcccacgagaggaagcatcat
tcgtcttcggcggagaagcagcgctattactcatgtgatcgctacggcagtcgagaaaac
tgtcccagcaagtctgccatggcaagctgtgccacttcacctagcgaggccctggaggcc
agtctcaacaagcagggcagtgggtgggctaaggggagcccggtgttgttgacctcaggg
gcgagtactccaagccatgggcgcagacagctaccccagacccccattgctcctcgtccc
tctgtggcctacaggactgccaactcctcccctgtgcagtttctggtcacacaggccggc
ttgcttcccccgagtcctggcaggatgagccgcggtctgtctgagcacaacgccctctta
aacagcagctccatctccagctcaccggcccctgtcagtcgcattaactcagaacccttc
ctagggcccccggaccaccctgccggcccccaacccgaaacgtacgctgtcttccaagat
gatccgagccctcagatgggccattctcccctgactgtagggatgaaaatcgtggcgatt
cccccacctccccaacaacagttccgcagggttcccaatggataccactttaccacgggc
cccggcgccaccaaaggacgggcacgacggtactaa
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integrated database retrieval system
