Carassius auratus (goldfish): 113074267
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Entry
113074267 CDS
T07313
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113074267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113074267
Spliceosome [BR:
caua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
113074267
Complex C
U4/U6.U5 tri-SnRNP related factors
113074267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
113074267
NCBI-ProteinID:
XP_026102813
Ensembl:
ENSCARG00000054163
UniProt:
A0A6P6JP96
LinkDB
All DBs
Position
Unknown
AA seq
470 aa
AA seq
DB search
MAVSQQQQQQQAVSKPAGGKHGNNLPLWGNEKTMNLNPMILTNVLSSPYFKVQLYELKTY
HEVVDEIYFKVNHMEPWEKGSRKTAGQTGMCGGVRGVGTGGIVSTAFCLLYKLFTLKLTR
KQVMGLITHTDSPYIRSLGFMYIRYTQPPSDLVDWYDEFLDDEEELDVKAGGGCVMTIGE
MLRSFLTKLEWFSTLFPRIPVPAQKAIDQHMKSRPRKPPQKDEQDAEEAADSGRHGDRRR
SRTPRKSPSPRRSQNRSRSRSHHREKQSASFDHELERERDRQRKEREGKDRDRDRERDRD
RRRSRTPDRTRERRRSRSASREKRKEREAESERERSRRKDREHHKDRERSKDKRSKGEGE
ERRHKEDKEDRKHREEKRSKRSRSRSRDRKHKTERSSKKRSRSGSRSRQEAGEEKNRKRE
RSHSKERSHKRSRSKERSHRRESSNGREHVKQEHPSPEKGERTNSVQVSP
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcggttagtcagcagcaacaacagcagcaggccgtgagcaaaccggctggcgggaaa
cacgggaacaacttgccgttatggggcaacgaaaagactatgaacctcaaccccatgatc
ctgacaaacgtcctgtcgtcgccatacttcaaggtccagctgtacgagctcaagacgtac
cacgaggtggtggacgagatttacttcaaggtcaatcatatggagccatgggaaaaaggc
agcaggaagaccgcggggcagacgggaatgtgcggaggggttcgaggagtcggtacgggt
gggattgtgtccactgcattttgcttgctgtataagctatttacactgaaactgacccgc
aaacaagtgatgggtctcatcactcacacagattcgccctatatcaggtcactgggcttc
atgtacatcaggtatacccaacctccttctgacttggtggactggtatgatgagttcctt
gacgacgaggaggagttggatgtgaaggctggaggagggtgcgtaatgacgatcggagag
atgctccgctccttcctgaccaagctggaatggttctcaacgttgttcccacgaatacct
gttcctgcgcagaaagcaatcgaccaacacatgaagagccgaccacgtaaacccccgcaa
aaagatgagcaggatgcagaggaggcagccgattcgggaaggcatggtgataggcgccgt
tccaggacacctaggaaaagtcccagtcccaggagatcccaaaatcgttcacggagtcgc
agccatcacagagaaaaacaaagcgccagctttgaccatgaactggagcgagaacgagat
cggcagcgcaaagaacgggagggaaaggaccgggatagagacagggagagagaccgagat
agacgacgctccaggacaccagaccggaccagggaacgacgccggagtcgcagcgccagt
cgagagaagcggaaagaaagggaggcagagagtgagagggagcgtagtcgcaggaaagac
agagagcaccataaagatcgggagaggtccaaagacaagaggagtaaaggagagggggaa
gagaggaggcacaaggaagataaggaggatagaaaacacagggaagaaaagaggagtaaa
cggtcaaggagcagaagcagagacaggaaacacaaaaccgaacgatctagcaagaagcgc
tcccgctcgggcagcaggagcaggcaggaagcaggggaggagaagaaccggaaaagggaa
cgcagccatagtaaggaacgctcacacaaacgcagtcgcagcaaagagcgatcgcaccga
cgagaatcaagcaatggacgagaacatgtaaaacaagagcatcccagtcctgaaaaagga
gaaagaacaaacagtgttcaagtgtctccctga
DBGET
integrated database retrieval system
