Carassius auratus (goldfish): 113074275
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Entry
113074275 CDS
T07313
Symbol
sox17
Name
(RefSeq) transcription factor SOX-17
KO
K04495
transcription factor SOX17 (SOX group F)
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
113074275 (sox17)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113074275 (sox17)
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113074275 (sox17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Sox17_18_mid
HMG_WDHD1
HTH_24
Motif
Other DBs
NCBI-GeneID:
113074275
NCBI-ProteinID:
XP_026102820
Ensembl:
ENSCARG00000058634
UniProt:
A0A6P6N1F7
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MSSPDAGYASDDPSQTRGTSSVLMSEMRQCAWVDPLSPLSDTKAKHEACTSAGPGRGKSE
PRIRRPMNAFMVWAKDERKRLAQQNPDLHNAELSKMLGKSWKSLLLVDKRPFVEEAERLR
VKHMQDHPNYKYRPRRRKKVKRNKRLDSSFVLHGEGDAQNSLGMEGMSVGYSELPQARLP
PYCETQTLFEPYSLPTPDPSPMDAGMTDFFAHLQDNHHQSVYSYHNHQEHHFQENTNTLS
NMHGHTNMKSLTNTHFHSITHCNINTHTNPNLHNSSNTQFNLINNPHPHQTLNESTKPQT
SHSSGTHFKSLTHPISHTIINKSYFSHQVKPPDYLNCPSTLDYHYNSNSQLKHGELSLPV
DCHTYKHDISEPNSQAPAAAQNQGSSEMVDEGEFEQCLAYGVPHVPLQGSNLISSVLSDA
STAVYYYGYSNS
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtcccgatgcgggttacgccagtgacgacccaagccagacccgaggtaccagc
tcagtcctgatgtctgaaatgaggcagtgcgcgtgggtggacccgctcagtccgctttcc
gacacgaaggcaaaacacgaggcatgtacttcagcgggtcccgggcgcggaaagagcgag
ccgcgcatccgcaggccgatgaacgcatttatggtgtgggcgaaagatgaacgcaagagg
cttgcgcaacaaaacccagatctgcacaatgcggagctgagtaaaatgcttggtaagtca
tggaaatctttactactagtggacaaacgtccatttgttgaggaggcggaacgtctcaga
gtgaaacatatgcaagaccacccaaactacaaatatcggccacggcgtcgtaaaaaggtg
aaacgaaataaacgactggactccagctttgtgcttcatggggagggtgatgctcagaac
tctctgggcatggagggcatgagtgttggatattcagaactgccccaagctaggctgcct
ccatattgtgagacgcagactttgtttgagccctacagcttgcctacacctgacccctct
cctatggacgctgggatgactgatttttttgcccatcttcaggacaatcaccatcagtca
gtatacagctaccataaccaccaagagcaccactttcaggaaaacacaaacactctcagc
aacatgcatggtcatactaacatgaaatcactcacaaacacacattttcacagcattact
cactgcaacatcaacacacacaccaatcctaacttacacaattccagcaatacacagttt
aatctaataaataatcctcaccctcatcaaactcttaatgagagtaccaaaccacaaact
agtcacagttctggtactcattttaagtccctcacccacccgatatctcacaccatcatt
aacaaaagctatttttctcaccaagtcaagcctcctgattacctgaactgtccttcaact
ttagattaccattataattctaactctcagttgaagcatggggaattgtcacttcctgtt
gactgtcacacatataagcacgacatttctgagccaaactcacaggcccctgcagcagct
cagaatcaaggatctagtgaaatggtggatgaaggggagtttgagcaatgccttgcttat
ggggtcccccatgtacctttgcaggggtccaacctaatctcaagtgtactgtctgatgca
agtactgctgtgtactactatggctatagtaattcctga
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