Carassius auratus (goldfish): 113074346
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Entry
113074346 CDS
T07313
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
caua03016
]
113074346
Enzymes [BR:
caua01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
113074346
Transfer RNA biogenesis [BR:
caua03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
113074346
Prokaryotic type
113074346
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Pus10_C
Motif
Other DBs
NCBI-GeneID:
113074346
NCBI-ProteinID:
XP_026102953
Ensembl:
ENSCARG00000056273
UniProt:
A0A6P6N3B5
LinkDB
All DBs
Position
Unknown
AA seq
303 aa
AA seq
DB search
MRSSSRAAIAISMAIQNSSLSKLQSCNGIFAIYKKQGPTSADVLNTLKKALLKVYPYTEA
GVANPNPRKRNKQPLKIGHGGTLDSNASGVLVVGIGEGTKMLTTMLAGSKKYRAIGELGK
ATDTLDVTGNVVEEKSYDHITKEVFEEKLKQFTGEIMQVPPLYSALKKDGKRMSVLLKQG
QEVEAKPARPVTVYSLSLQDFSPPYFTIDVECGGGFYVRSLVDDLAKALSSCAHIKELSR
TKQGQFTLEEHALKEDRWTLTDISQALQPCPKPSGQQKNAKKTKSKHMPTPSESKGDDGN
TND
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcatcatctcgcgccgcgatagcaataagcatggctattcagaacagttcacta
tccaaattgcagtcttgtaatggtatatttgccatatataagaaacagggacccacctcc
gcagatgtgttaaacactctgaagaaagcgcttttaaaagtttatccttacacagaggca
ggtgttgcaaatcccaatcctcgcaaaaggaacaagcaacctttaaaaattggccatggt
ggcaccctggacagcaatgcttctggtgtacttgtagttggaattggtgaaggaacgaag
atgctcaccacaatgcttgcaggatcaaagaaatacagagctattggagagttaggcaaa
gcaactgatactctagacgtcacaggaaatgttgttgaagaaaagagttatgatcacatc
acaaaagaggtttttgaggagaagctgaagcagtttacgggtgaaattatgcaggttcca
cctctatattcagcactgaagaaggatggcaagcgcatgtctgtcctgcttaagcaaggt
caagaggttgaggctaaacctgctcgtccagtcacagtgtacagtctctctttacaagac
ttcagtccgccgtatttcaccatagatgttgagtgtggaggtgggttttatgtgagaagc
ttggttgatgatcttgcaaaagctctatcatcctgtgctcatatcaaggaactcagtcgg
accaagcagggtcagttcacactggaagagcatgcattgaaggaggatcgctggactttg
acagatatctcccaggctctgcagccttgcccaaagccatcagggcaacagaagaatgcc
aagaaaacaaaatcaaagcatatgcccaccccatctgaatctaagggtgacgatggaaat
acaaacgattaa
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