Carassius auratus (goldfish): 113075105
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Entry
113075105 CDS
T07313
Name
(RefSeq) vacuolar protein sorting-associated protein 54-like
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113075105
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113075105
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113075105
Membrane trafficking [BR:
caua04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
113075105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
RNA_pol_Rpb2_6
Motif
Other DBs
NCBI-GeneID:
113075105
NCBI-ProteinID:
XP_026103626
Ensembl:
ENSCARG00000058416
UniProt:
A0A6P6N5G1
LinkDB
All DBs
Position
Unknown
AA seq
988 aa
AA seq
DB search
MSSNQGSSPLSQSSDGPFRKPRAPAMGPRHCQTPHSLPDVCPKEPTGEGRALCDGPSVVV
DQHRWTVYNSQVNLPAALNDPRLAKRESDFFTKTWGLDFTETEVMPSFYLPNISREHFSS
YLQETAQREKVHERCKNICQSKDDLSVLTITSNHDKARAELEQVPKIFMKPEFMLNDPAT
FNAVLPWSHFSVAGGKNSRDVASSRLLQEKLSHYLDVVEVSIARQISLRSEAFFHAMSSQ
HELQDRLRGTADAVAKLRARTAAIDRIMCRGPLRALRDALTRNNCVKLHNKLKLMAAVHQ
TQPTVQLLLSTSEFVGALELIATTKEVLQQELQGVHSFRHLGSQLCEMERLIDKMMVADF
STYVQSDLSRPFEEDSQILEKDRLQSLVFGLLRQRKLDFLDIYSEEMVRVAKSVVRQCVV
KSVSQISEIDADTVRFHEQMRLMTFPQWFDLLLDIFEHFILFLKRIKATLGVIRSVVLEV
LDSSQRSRLADVSSATNHSDGRTNEEEEEEESGGGEAELAYLTHEGLFISDALTLNEEEQ
HSHTAAHVQTREQTHTDACGSDSASATTESSSSREHNSNTTSSLPTGGATAIGEDVMPSD
LELGRVANNAQELLYTASDVSQDRCVKVLMTRAKDGSLERLSSSEFVCLSQAVESFVSDA
DELCGRRSVSLRGALQSQANRFVQRFHEERKNKLSLLLDNERWKQAEVPAEFQDLVDSIA
DGRITLPEHKHTGSEDRKPGEFLCVDGQKYAVVGTVLLLIRMFLEYCQCVNDIPSITTDI
LTRLADLLKLFNSRSCQLVLGAGALQVVGLKTITTRNLALVSRCLQLLVHFIPVIRAHFE
SRLQPRQYSILRHFGHITKDYNDHIAEISAKLVAIMDSMFEKALSKYEVKAPMPSVCLRN
VCKQMAKMHEAINELLPEEQTQMLFHRINASFKLNLKRQLARLGVINDGGPQYGLVMLDV
AFYSESVLALRSLECLDLNMLEIWEQKR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctaaccagggctcatctccgctctctcagtccagtgatgggcccttcaggaag
cccagggcccctgcaatgggccccagacactgtcagacgccacactctttaccagacgtc
tgtcctaaagagcccaccggtgagggacgtgctctctgtgacgggccgtctgttgtggtc
gaccagcaccgctggactgtgtataactctcaagtgaacctccccgcggccctcaacgac
cccaggctggccaagagagagtcggacttcttcaccaagacgtggggcctggacttcacc
gagaccgaggtcatgccttccttctacctgcccaacatcagccgagagcacttcagctcg
tacctgcaggagacggctcagagggagaaggttcacgagcgatgtaagaacatctgccag
agcaaagacgatctgtccgtgctcaccatcaccagtaatcacgataaagcccgagctgaa
ctggagcaggtgcccaagatcttcatgaagccggagtttatgctgaatgatccagccacg
tttaacgccgtgttgccgtggtctcacttcagcgtcgccgggggcaagaacagccgagat
gttgcatcgtcacggttactgcaggaaaagttgagtcactatctggacgtggtggaggtg
agcatcgctcggcagatctctctccgctccgaggccttttttcacgccatgtcgtctcag
cacgagctccaggatcgtctgcgaggaacagcggacgccgtggctaagctccgcgcgcgc
accgctgccatcgaccgcatcatgtgccgcggaccgctgcgagcgctgcgagacgctctg
acccgtaacaactgcgtcaagctacacaacaagctgaagctgatggcggccgtgcaccag
acgcagcccaccgtgcagctgctgctctccacctcagagttcgtcggggcgctggagctc
atcgccaccaccaaagaagtgctgcagcaggaactgcagggggtacacagcttcagacac
ttgggttctcagctctgtgagatggagaggttgatcgataagatgatggtggccgatttc
tccacctacgttcagagcgatctcagccgaccctttgaggaggacagtcagatcctggag
aaggatcgcttgcagtctttagtcttcggcctgctgagacagaggaagctggatttcctg
gacatctacagcgaggagatggtgcgcgtcgccaagagcgtggttcgacagtgtgttgtg
aagtctgtgtcacagatcagtgagatcgatgcagacaccgtcaggtttcacgagcagatg
cgcttgatgacctttcctcagtggtttgatctgctgctggatatttttgaacacttcatc
ctgttcctcaagaggatcaaggctacgctcggcgtcatccgcagcgtggtgctggaagtg
ctggatagcagccagaggagtcggctagcagacgtttcctctgcaaccaatcattctgac
ggcaggaccaatgaggaggaagaggaggaggagtctggaggcggagaggcggagcttgcg
tatctcacacacgaggggctgttcatcagtgatgcgctgacgctgaatgaagaggagcag
cacagtcacacagcagcacatgtgcagacgagagagcagacacacacagacgcctgcggg
agcgactcggcctccgcaaccaccgaatcttcctccagcagggaacacaactccaacact
acctcctccctgcccacagggggcgctactgcgattggtgaggacgtgatgccgtcagat
ctggagctgggtcgggtggccaataacgctcaggagctgctgtacaccgcctcagacgtc
agtcaagaccgctgtgtcaaagtgctcatgacacgagcaaaggacgggtctctggagcgc
ctgagctcgtcagagttcgtgtgtttgagtcaggcggtggagtcgttcgtctcagacgct
gatgagctgtgcggccggcgcagtgtgagcctgaggggggcgctgcagagtcaggccaac
cgcttcgtgcagcgcttccacgaggagcgcaagaataaactcagtctgctgctggataac
gagcgctggaagcaggccgaggtcccggctgagtttcaggatctggtggactccatcgct
gacggacgcatcacacttcctgagcacaaacacacagggtccgaggacaggaagcctggt
gagtttctgtgtgtggacggacagaagtacgctgtggttgggacggtgctgctgctgatc
cgcatgtttctggagtactgccagtgtgtgaacgacatcccctccatcaccaccgacatc
ctcacacgcctcgccgacctgctcaagctcttcaactctcgcagctgtcagctggtgctg
ggggcgggagctctgcaggtggttggcctgaaaaccatcaccaccagaaacctggctctg
gtgtctcgctgtcttcagctgctggttcacttcatccctgtgatcagagcacactttgag
agcagactgcagcccagacagtacagcatactgagacacttcggacacatcaccaaggac
tacaatgatcacatcgccgagatctctgctaaactagtggccatcatggacagcatgttt
gagaaggctctgtctaagtatgaggtgaaggcacccatgccgtctgtgtgtctgcgaaac
gtgtgtaaacagatggccaagatgcacgaggccattaatgagctgttaccggaggagcag
acgcagatgctgttccacaggataaacgccagctttaaactgaatctgaagagacagcta
gcacgactgggagtcatcaatgatggcggacctcagtatgggctggtgatgctggacgtg
gcgttttactcggagagcgtgctggctctgcgctctctggagtgtctggacttaaacatg
ctggagatctgggagcagaagaggtga
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