KEGG   Carassius auratus (goldfish): 113075305
Entry
113075305         CDS       T07313                                 
Name
(RefSeq) roquin-2-like
  KO
K15690  RING finger and CCCH-type zinc finger domain-containing protein
Organism
caua  Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:caua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113075305
   04121 Ubiquitin system [BR:caua04121]
    113075305
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    113075305
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113075305
SSDB
Motif
Pfam: Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-CCCH_4 zf-RING_2 zf_CCCH_4 Prok-RING_4
Other DBs
NCBI-GeneID: 113075305
NCBI-ProteinID: XP_026103784
Ensembl: ENSCARG00000053097
UniProt: A0A6P6N658
LinkDB
Position
Unknown
AA seq 1029 aa
MPVQAAQWTEFLSCPICYNEFDACSHKPISLGCSHTVCKTCLHKLHRKACPFDQTAISTD
IDVLPVNCALLQLVGAPVPEREIVSVGSVEDTRHYEVCRICVEELALYLKPVSGGKGVVS
LSQSTLSRPMQRKLVTLVNCQLVEEEGRMRAVRACRSLGERTITELILQHQNSQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEVRFPQASKTSIG
HVVQLLYRASCFKVSKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLMHKSHMQSIIDKLQSPESFAKSVQELTIILQRTGDPANLNSLRAPLERLAGI
DHNPDAAAPSWTELESVLLAVKVVVHGLVEFIQNFSKKSNESPQAQPNSKYKTSMCRDLR
QQGGCPRGASCTFAHTQEELEKYRMRNRKASGAVRPFPSVPVILPKTGTKGAVPGSEGKN
HEKDAPEDVSLTQLIPRGGEHQEDKTLPSSANGLPAASLEQNPISQSQSSVIASGGCTED
DCGLLKHGPVLTRAPPKMYYSQDQRPYDLSSYHQPAISPHKSCNARFHRSSNVPESMLPP
SLGPLYPFPPADRLGPVPYGPPSTYASVSHAHSMYTPVYDSRRVWRPPLYPRDGGRSNSL
PPEVFHSTVYQPPLRERFNSLDSPYCSTVEQRAPMHRDAYNEELCRHKQEQWVHHHSNMN
RPSQSSPVFTVDVCPEHPEGVGGGRMTCKCHGGEESLAHYSPWSCSTISPFESEPHHLST
HSCSKQLDEESGGKQWLHMFEPYRRLKDEDPIIPFGEGPIISKWGAISRASRTGFHTTDP
VQATASQGCAGTTSINFRDYRCHIGHSDLRWGPRGSDSSSHSSFLESDQLGMSGLHVRHD
SLCRGSKQGTDLLGKDGTESDPDRDIELELSALHMEDTETQDCDSEDSMETQSRSKNSHL
STVFGNPVASSHLENNLPDRMDTHLMKKIRNPLSPGDLSMGQMSMRTCLPRHGDPPRPSP
GPEMLLNGN
NT seq 3090 nt   +upstreamnt  +downstreamnt
atgccggtgcaggcagctcaatggactgagtttctatcctgccccatctgctacaatgag
tttgacgcctgcagccacaagcccatcagcctgggctgctcgcacaccgtctgcaagacc
tgcctgcacaaactgcaccgcaaggcctgtccttttgaccagacggccattagcactgac
attgatgtgctgcctgtcaactgtgccctcctgcagctggtgggggcgccggttccggag
agagagattgtgagtgtgggcagtgttgaagacacaagacattatgaagtgtgcaggatc
tgtgtggaggagctggcgctgtatctcaaaccagtcagtggaggaaaaggtgtagtgagc
ctcagtcagagcacgctcagtagacccatgcagaggaagctggtgaccctggtgaactgc
cagctggtcgaggaggaggggcgtatgagggcggtccgggcgtgcagatctctgggtgag
cgcaccatcactgaactgatcctgcagcaccagaactcccagcagctctctgcaaaccta
tgggccgctgtacgggcccgcggctgtcagtttctaggacctgccatgcaggaggacgct
ctgaagctggtgctgctggcgctggaggacggctcggctctctcgaggaaggttctggtg
ctgtttgtggtgcagaaactggaagtgcgcttccctcaggcgtctaagaccagcatcggt
catgtagttcagctgctgtaccgcgcctcctgctttaaggtgagcaaacgtgatgaagac
tcctccctcatgcagctcaaggaggagtttcgcacttacgaagccctgcgccgtgaacac
gacgctcagatcgttcacatcgcgatggaagcggggctgcgcatctcaccggagcagtgg
tcgtctctgctgtacggggatctcatgcacaaatctcacatgcagtcaatcatagacaag
cttcaatccccagaatcctttgcaaagagcgtgcaggagctcaccataatcctgcagaga
acaggagacccagccaacctcaacagcctcagagctcctctcgagcggctggccggcatc
gaccacaaccctgatgcggccgctccgtcctggacagagctggagagcgtgttattggct
gtgaaggttgttgtccacggtctggtggaattcatccaaaacttcagcaaaaagagcaat
gaaagccctcaggctcagcccaacagcaagtacaagacgagtatgtgcagggacttacgg
cagcagggcggctgtccgagaggggccagctgcacctttgcccacacgcaagaggagctg
gagaagtacagaatgaggaataggaaagccagtggggcggtgagacccttcccgtcagtt
ccagtgattctgcctaaaaccggcaccaaaggagcagtcccagggtcagaggggaagaac
cacgagaaagacgccccagaggacgtgtctctcactcagctcatccctagaggaggagag
caccaggaggacaaaacgctccccagtagtgcgaacggactgcctgctgccagcctagaa
caaaatcccatcagtcagagccagtcatctgtgatagcttcgggggggtgtacagaggac
gactgtggtctcctcaaacacgggcctgtcctcacgagagctcctcctaagatgtactac
tctcaggaccagagaccatatgacctgtcatcctaccaccaacctgccatttctcctcac
aagtcatgcaacgctcgcttccatcgttccagcaacgtccctgagtccatgttacccccg
tcattgggccctctgtacccttttcctcctgcagacagattaggccccgtcccgtacggc
ccaccctcgacctacgcctctgtgtcccatgcacacagcatgtacaccccagtctacgac
agccggcgcgtgtggaggccgccgctgtatcccagggatggtgggaggagtaactctctc
cctccagaggttttccattccaccgtctaccagccgcccctccgagagcgcttcaactcc
ctggacagcccctactgcagcaccgtggagcagagagcgccaatgcacagggatgcgtac
aacgaggaactctgtcgccacaaacaggaacagtgggtacatcaccacagcaacatgaac
aggccctcccaatcctcgccggtcttcactgtggatgtgtgtccagagcatcctgagggt
gtaggtggtgggcgtatgacttgtaagtgtcatggtggagaagagagtctagcccactac
tcgccctggtcctgcagcaccatcagcccatttgagtcagagccccaccatttgtcaacc
cattcctgctccaaacagctagacgaggagagtggcggcaaacagtggctgcacatgttc
gagccctacaggcgattgaaagacgaagatcccatcattccttttggagaggggcccatc
atctctaaatggggagccatctctcgggcgtcccgcactggttttcacaccactgacccg
gtccaagctactgcatcgcaggggtgcgccggcaccacatcaatcaacttcagagactat
cgctgtcatattggtcacagtgacctcagatggggcccacgtggatctgattcttctagt
cactccagctttctagaaagcgatcagctgggaatgtcagggctgcatgtaaggcacgat
tccttatgcagggggtcaaagcagggcacagatttgctgggtaaggatgggacggagagt
gatcctgacagagacatcgagctggagctgtccgctctgcacatggaggacacagagaca
caggactgcgactctgaggactctatggaaacgcaaagccggtccaagaacagccacctc
tctacagtcttcggtaatccagtggcaagttctcatttggaaaacaacctgcctgacaga
atggacacccaccttatgaagaagataagaaatcccctctcccctggagacctcagtatg
ggacagatgtcaatgaggacatgcttgcccaggcatggagaccctccgcgacccagtcca
ggacctgagatgctgctaaacggtaactga

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