Carassius auratus (goldfish): 113076926
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Entry
113076926 CDS
T07313
Name
(RefSeq) thrombospondin-2-like
KO
K04659
thrombospondin 2/3/4/5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113076926
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113076926
09144 Cellular community - eukaryotes
04510 Focal adhesion
113076926
09142 Cell motility
04820 Cytoskeleton in muscle cells
113076926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113076926
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113076926
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113076926
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Opsonins
113076926
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113076926
Exosomal proteins of colorectal cancer cells
113076926
Exosomal proteins of bladder cancer cells
113076926
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113076926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
TSP_1
TSP1_spondin
VWC
TSP1_CFP_C
EGF_3
TSP1_ADAMTS
TSP1_CCN
Laminin_G_3
cEGF
DUF3972
Motif
Other DBs
NCBI-GeneID:
113076926
NCBI-ProteinID:
XP_026105326
Ensembl:
ENSCARG00000060697
UniProt:
A0A6P6N8D5
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MILRRCLRVLALFLLYTSVKSQDAELEDDTVFDMFETSGITHKTIGVKLFKGLDSDAPAY
RFIRFDQLPSVSSFALQKLLLQIQNNEGFILTATLRQDRTSRGTILALEGPRERRQFEVV
SDGRTNTLDLVYWWADGSRNVISFEDVDLSDSQWKNLTLYVHGETATLYIGCGLIDSFIL
DEPFYEHLSATGGHMYVAKGATRESHFRGLLQNVRFIFDTPLEDILESRGCDLGNPVEVN
VVSESEEEVDVPSSIATNVITDVSATSSSEQMCEHSCEELANLFQELKGLRVVVSNLIDG
LQKVTEENTAMKEALNKMQSLSEQAMCWQDGRVFEDKEDWIVDSCTKCTCQEGKVICRQI
TCPPVACANPSFIDGECCPVCLPLDSEDGWSPWSEWTRCTVTCGSGTQQRGRSCDDTSNT
CFGPSIQTRKCSLGKCDRRVRKDGGWSLWSPWSSCSVTCGEGLITRIRLCNAPVPQRGGK
DCEGDGRETQSCNTNPCPIDGGWGPWSLWETCSATCGGGLKSRFRECNSPEPQHGGRKCL
GDSIENEVCNRQECPIDGCLSNPCFAGVECITASDGSWECGRCPNGYSGNGTFCKDVNEC
DMVSDLCHKVGGLQQCVNTDPGFHCLPCPPRYKGTQPYGMGVESAKVNKQVCEPYNPCKD
NSHSCHKYALCIFLSHFSDPMYKCECRIGYAGDGIICGEDFDLDGWPNQDLVCGANATYH
CKKDNCPTLPNSGQEDFDNDGQGDACDKDDDNDEIVDERDNCPLMYNPRQYDYDKDDVGD
RCDNCPYEHNPAQTDTDNNGEGDACSIDMDGDEILNQRDNCPLIYNTDQKDTDLDGVGDQ
CDNCPLVHNPQQTDADNDLIGDQCDDNQDIDEDGHQNNMDNCPYISNANQADHDGDGKGD
ACDFDDDNDGIPDDRDNCRLVSNKDQTDSDGDGRGDACENDFDNDKVPDIFDACPENNAI
SVTDFRKFQMVHLDPKGTTQIDPNWVVRNQGKELVQTANSDPGIAVGFDEFSAVDFSGTF
YVNTDRDDDYAGFVFGYQSSRRFYVVMWKQITQTYWEERPSKAFGISGVSLKVVNSTTGT
GKNLRNALWHTGNTKQQVRTLWHDPKNIGWKDYTAYRWHLIHRPKTGFIRVVVYEGKQIM
ADSGPIYDQTFTGGRIGLFVFSQEAVVFSDLKYECRDN
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgattctcagaagatgtctcagagtgttggccctttttcttctgtacacctccgtaaaa
tctcaagatgcagaactggaagatgacacagtttttgacatgtttgaaaccagtgggatc
acacacaagactatcggtgtgaagctttttaaaggccttgacagcgatgctccagcatat
cgcttcatccggttcgaccagctcccctcagtcagctcctttgcactacaaaaacttctt
ttgcagattcaaaacaatgaaggcttcattctgaccgccactctgcgccaggaccggaca
tcccgtggaaccattcttgcactggaaggccccagagagcgcagacagtttgaagttgtt
tcagacggaagaaccaacacattagatctggtgtactggtgggctgatggctcacgcaat
gtgatctcttttgaggatgtagacctctcggattcacagtggaagaatctaacactctat
gtgcatggagagacggcaactttgtacattggttgtggacttattgatagctttattcta
gatgaacctttctatgaacacctgagcgccacaggtggtcatatgtatgtggccaaaggg
gccacacgagaaagccattttaggggcttgctgcagaatgtacgttttatctttgacacc
ccacttgaggacattctggagagcaggggatgtgatcttggaaacccagtcgaggtgaat
gtagtcagcgagagtgaagaagaggtggatgttccatcttcaattgccaccaacgtgatt
acagatgtttcagcaaccagctcctcagagcagatgtgtgaacattcttgtgaagagctg
gccaacctcttccaggagctcaagggtctcagagttgtagttagcaacctcatagatggt
ctgcagaaagtgacagaagaaaacacggcgatgaaggaggcactaaataagatgcagagt
ctttcagagcaggctatgtgctggcaagatggtcgagtgtttgaggacaaagaggactgg
attgtagatagctgtactaaatgtacctgccaagaaggaaaagttatttgtcgtcagatc
acttgtcctccagtggcatgtgccaatccatccttcatcgatggcgaatgttgtccagtt
tgccttccattggatagtgaagatggctggtctccatggtcagagtggactcggtgcaca
gtcacatgtggaagtggcactcaacagagggggcgctcttgtgatgacacaagcaataca
tgttttggaccctcgattcagacacgcaagtgcagtttgggaaaatgtgaccgcagagtt
cgtaaagatggtggctggagcttatggtctccatggtcatcctgctcagtgacgtgtgga
gagggactgatcacacgtatccgtctctgcaatgctcctgttccacaaagaggtggaaag
gactgtgaaggtgatggacgagagacacagagctgtaacacaaacccctgtccgattgat
ggtggctggggtccatggtctctctgggaaacatgttcggctacatgtggagggggtctg
aagagtcgctttagggagtgtaacagccctgaaccacagcatggaggaaggaagtgtctt
ggagactccattgaaaatgaagtatgcaaccgacaagagtgtcctattgatggctgtctt
tcgaacccttgcttcgccggagtcgagtgtatcacggcttctgatggatcctgggagtgt
ggacgctgcccaaatggttacagtggcaatggaactttctgtaaagatgtcaatgagtgc
gatatggtgtcagatctgtgtcataaggtgggtggcctacagcaatgtgtgaatacagac
cccggattccactgtctcccctgccccccgcgctacaaagggactcagccctacggcatg
ggagtggagtcagctaaagtcaacaaacaggtgtgtgaaccctacaacccctgcaaggac
aacagccatagttgccacaagtatgcgttatgcatcttccttagtcacttcagtgaccca
atgtacaagtgtgagtgccgtattggttatgctggagatggcatcatctgcggagaggac
tttgatttggatggatggcccaaccaggatcttgtgtgtggagcaaatgccacctaccat
tgcaaaaaggacaactgtccgactttacccaactctggtcaagaggactttgacaatgat
gggcaaggagatgcttgtgataaagatgatgacaatgatgaaattgtggatgaaagggac
aactgccccctgatgtataaccccaggcagtatgactatgacaaggatgatgttggagac
cggtgtgataactgcccgtatgagcataaccctgctcagaccgacactgacaacaatggg
gaaggagatgcctgttctattgatatggatggagatgagattctaaaccagcgagacaac
tgccctctcatttacaacacagaccagaaagacacagatttagatggtgtcggagaccag
tgtgataactgccccttagttcacaacccacagcagacggatgcagataacgatctaatt
ggagaccagtgtgatgacaaccaggacatagatgaagatggccatcaaaataacatggat
aactgcccgtacataagcaatgctaaccaagccgaccacgacggagatgggaaaggagat
gcttgtgattttgatgatgataatgatggcattcccgatgaccgagataactgcagacta
gtttccaacaaggaccaaacagactctgatggtgatggccgtggtgacgcctgtgagaat
gatttcgacaacgacaaagtcccggatatcttcgatgcgtgcccggaaaacaatgccatc
agtgtcacagatttccggaagtttcaaatggtgcacctcgaccccaagggaaccacgcag
attgatcccaactgggtggtccgaaaccagggcaaagagctcgtgcaaactgccaactct
gaccctggaattgcagtgggctttgatgagttcagtgctgtagatttcagcgggaccttc
tatgtgaatacagacagggatgatgactatgcaggttttgtgtttggataccagtctagt
cgacgtttttacgtagtgatgtggaaacagatcacgcagacgtactgggaagaaaggcca
tcaaaggcgtttggcatctctggcgtctctctcaaggtggtcaactccaccacgggcact
gggaaaaatctacgcaatgcattatggcacacaggcaacaccaaacagcaggtacgcact
ctgtggcacgacccaaagaatattggctggaaagactataccgcctaccgctggcatctc
atccacagaccgaagactggcttcattagagttgttgtgtatgaaggcaagcagatcatg
gcagactcaggacccatttatgaccagacatttacaggtggaagaatcgggttattcgtt
ttctcccaggaggccgtcgtcttctctgacctcaaatatgaatgcagagataattga
DBGET
integrated database retrieval system
