Carassius auratus (goldfish): 113078079
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Entry
113078079 CDS
T07313
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4-like isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113078079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113078079
03019 Messenger RNA biogenesis [BR:
caua03019
]
113078079
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113078079
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
113078079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
113078079
NCBI-ProteinID:
XP_026106160
Ensembl:
ENSCARG00000054014
UniProt:
A0A6P6NAB3
LinkDB
All DBs
Position
Unknown
AA seq
268 aa
AA seq
DB search
MQELIACVDHIKFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFMRAACMKGGMCPFRHI
SGEKSVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGKSCKFMHPRFELPMGATEQPP
LPQQAQSQQKQQNMQPTNRSSHSLIQLTNTNVNNNQRMPNAVGIMHSNNMGGPRGPRPLD
QVTCYKCGEKGHYANKCSKGHLAFLSGQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaattaatcgcgtgtgtcgaccacatcaagtttgatcttgaaatcgctgtcgaa
caacagttgggcgctcagcccctgcctttcccaggaatggacaagtctggagcagctgtg
tgcgagttcttcatgagagccgcctgtatgaaaggtggaatgtgtcctttcagacacatc
agtggagaaaagagcgtggtgtgcaaacactggctgaggggcttatgcaagaaaggagac
caatgtgaatttttacatgagtatgatatgacaaagatgcctgaatgttatttctactct
aaatttggggagtgcagtaataaagagtgtccatttttgcacattgacccagaatctaag
attaaagattgcccctggtatgataggggcttttgtaagcatggtccagattgcaggcac
agacacacaagaagagtcatctgtgtaaattaccttgttggcttctgcccggagggcaag
tcatgcaaatttatgcacccaagatttgaactccccatgggcgcaactgaacagccacca
ttaccacaacaggctcagtctcagcagaagcagcaaaacatgcagcccacaaaccggtcc
tcacactcactcatccagttaaccaataccaatgtcaacaacaaccagagaatgccgaat
gctgttgggataatgcactctaacaacatgggtggacctcgcggtccccgtccactggat
caagttacgtgttacaagtgcggtgagaagggccattacgcaaacaaatgctcaaaagga
cacctggcgtttttgagtggacagtaa
DBGET
integrated database retrieval system
