Carassius auratus (goldfish): 113078100
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Entry
113078100 CDS
T07313
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03440
Homologous recombination
caua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113078100 (top3a)
03460 Fanconi anemia pathway
113078100 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
caua03032
]
113078100 (top3a)
03400 DNA repair and recombination proteins [BR:
caua03400
]
113078100 (top3a)
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
113078100 (top3a)
DNA replication proteins [BR:
caua03032
]
Eukaryotic type
DNA Topoisomerases
113078100 (top3a)
DNA repair and recombination proteins [BR:
caua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
113078100 (top3a)
FA (Fanconi anemia) pathway
113078100 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
113078100
NCBI-ProteinID:
XP_026106186
Ensembl:
ENSCARG00000054697
UniProt:
A0A6P6NDB5
LinkDB
All DBs
Position
Unknown
AA seq
1003 aa
AA seq
DB search
MNVVFRSLRVTVDRRVYRHISVSMIRRTQIKKVLCVAEKNDAAKGIAEIMSNGRSRRREG
YSVYNKIYEYEYHLFGQNVTVSMTSVSGHLLSLEFKAPFQKWHSCNPVLLFDAEVEKYCP
ENFIPIKRTLEREVRQCQALVIWTDCDREGENIGFEVINVCKAVKPNLQVFRARFSEITP
NSIRRSCETLTEPDINVSDAVDVRQELDLRIGASFTRFQTLRLQKIFPQSLSDQLISYGS
CQFPTLGFVVERFKAIQAFVPETFFKIKVVHEPNEEESVEFSWKRHRLFNHTACLVLYQM
CMEDPMAKVISVTSKPKSKWRPLPLDTVELEKLASRKLRISAKETMKIAEKLYTQGFISY
PRTETNMFPQNLNLTTLVEQQTQDNEWGNFAQRILESGGPTPRNGNKSDQAHPPIHPTKY
TNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVTVEIEIAEERFSASGLTIIARNYLEVYP
YDKWYNKVIPLYTADTTFQPTAIEMVEGQTSPPQLLTEADLISLMEKHGIGTDATHAEHI
ETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKDK
ASVLSYHVAKYKAVFIESVRKAKKLDEALSNYLGPAQEITEQEQGDMEIPLPVRKCPQCN
RDMVLKKKKDSTRMFLSCMGYPACKAAVWFPDTVLEVSRDESICPTCHPHPVHMLKLKFK
RGSLPPMMPLEFVGCIGGCDETLREVLNLRYIRGGEADSVSRAHNGSGSNQHQVPRTNSA
PPFRVTPPAPGANGSRPPASLPPPRATHPPAPAQGGAIVCNCGQDALLLTVRKEGPNQGR
QFYKCNTGDCKFFLWADLPAEQPSSGGNRGPMTQNPQPPRPSIGFGNVPQQRQNNRGSGG
EDGETMCNCNEPAVTRTVMKDGPNKGRMFHTCGKPRDQQCGFFQWANENVAPATVFSGGS
GARPPGNKKASTSSNKPPTAKRPRTCGICHEPGHTRVTCPQGK
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttgtgtttagatctctaagagtgacagttgaccgtcgagtttatagacacata
tctgtaagcatgataagacgcacacagattaagaaagtgctctgtgttgctgagaaaaac
gacgcagctaagggcatcgcagagatcatgtccaacggtagatcgagaagaagagaaggc
tactctgtttacaacaaaatatatgagtacgagtaccacctctttggacaaaatgtaacc
gtaagcatgacatctgtgtcaggacatctcttgagtcttgaattcaaagctccctttcag
aaatggcatagttgtaatccagtcctgttgtttgatgctgaggtggaaaagtactgccct
gaaaacttcatacctatcaaaaggactctggagagagaggtgagacagtgccaagctctg
gtcatttggactgattgtgacagagaaggggaaaatatcggctttgaggtcattaatgtt
tgcaaagcagtgaagccaaaccttcaggtcttccgtgcacggttctctgagatcaccccc
aactccataaggagatcctgtgagacccttactgagccggacatcaacgtcagtgatgct
gtggacgtgagacaggagctggatctccgcatcggggcttcatttaccaggttccagact
ttacgcttgcagaagattttcccacaatccctctctgatcagctcatcagttatggcagt
tgtcagttcccgacccttggtttcgtggtagagcggtttaaagccattcaagccttcgtc
cctgaaactttctttaaaatcaaagttgtccatgagcctaatgaagaggaatcggttgaa
ttcagctggaaaagacatcgtcttttcaatcacacggcatgccttgtgctgtatcagatg
tgcatggaggatccgatggcgaaagtgatatctgtaacaagtaaaccaaaaagcaaatgg
cgacctttacctcttgatactgtggaacttgaaaaactggcttcaagaaaactgaggata
agtgccaaagaaaccatgaaaatcgcagaaaagctgtacacacaagggttcatcagttat
cctcgtactgagaccaacatgtttccacagaacctgaacctaaccacgctggttgagcaa
cagacacaagataatgaatggggaaattttgctcagcgcattttggaaagcggtgggccc
acacctcgaaatggaaacaaatctgatcaggcccatccccccattcaccccaccaaatac
accaacagtttacagggaaatgaaaagcggctgtatgagttcatagtacgtcacttcctg
gcctgttgctccaaagatgctcagggacaagaggtgacggtcgagattgaaatagctgaa
gagagattctcagcgagtggattgacgatcattgctcgcaattatctggaagtgtaccct
tacgacaagtggtacaataaggttattccattatatacggctgacaccacgttccagccc
acagcgattgagatggtggaaggacagaccagtccaccacagcttctgaccgaggctgat
ctgatctcgctaatggagaaacatggcattggtaccgatgcaacacatgctgagcacatc
gagaccataaagagtcgcatgtacgtggggctgacggcggaccagaggttccttcctgga
gaacttggcatgggtctcgttgaagggtataattcaatggggtatgagatgtctaaacca
gacctgagagcggagctggaggctgaccttaagcttgtatcagagggccgaaaggacaaa
gcctctgtcctcagttatcatgtggccaaatacaaggctgtttttatcgagtctgtgagg
aaggcaaagaagttggatgaggctttgtcaaattatctgggccctgctcaggagattact
gaacaggagcagggagatatggagatacccttaccagtgcgaaagtgtccacagtgtaac
cgtgacatggtcctgaagaagaagaaagacagcaccaggatgtttctttcatgcatgggt
tatcctgcctgtaaagcagctgtctggtttccagacaccgttctggaggtcagcagagat
gagagcatctgtccaacttgccatccacatccagtgcatatgctgaaacttaaattcaag
aggggaagtttgccacctatgatgccccttgagtttgttggatgcattggaggatgtgat
gagactctcagagaggtcctaaacttgagatatatccgaggaggagaagcagattctgtc
tctcgggcacataacggctctggatcaaatcagcatcaagtacctagaaccaactcagca
cctccattcagggttacacctccagcacccggagccaacggcagccgccccccggccagt
ctgcctcctccacgggcaacacatccaccagctccagcccagggtggtgccattgtgtgt
aactgtggtcaggatgcccttcttctcactgttcgcaaagagggtcctaatcaaggccgt
cagttttacaagtgtaacacaggagactgcaagttcttcctgtgggcagatctgccggct
gagcagccatcgtccggaggaaacaggggacccatgactcaaaatccccaacctcccagg
ccctcaattggctttgggaatgtacctcagcagaggcaaaacaacagaggatctggaggt
gaagatggtgaaactatgtgtaactgtaatgagcctgcagtgaccaggaccgtcatgaaa
gatgggccaaacaaagggcgaatgttccacacctgcgggaaaccacgtgatcagcagtgt
gggttcttccagtgggccaacgaaaatgtggctccagccacagttttctctggaggaagt
ggtgcccgacctcctgggaacaaaaaggccagtacttcttcaaacaaacctcccacggcc
aaaaggccaagaacctgtggaatatgtcatgagccgggtcatacacgggtcacctgtcca
cagggcaaatga
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integrated database retrieval system
