Carassius auratus (goldfish): 113078210
Help
Entry
113078210 CDS
T07313
Name
(RefSeq) Alstrom syndrome protein 1-like isoform X1
KO
K16741
alstrom syndrome protein 1
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
caua03036
]
113078210
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113078210
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
113078210
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
113078210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALMS_motif
Motif
Other DBs
NCBI-GeneID:
113078210
NCBI-ProteinID:
XP_026106300
UniProt:
A0A6P6NAR2
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MRPPPALTKLSLIHSKQEAIASVATSSQNSHSKTGLIPLLDLSDQRSSPIHSQTTATDPS
GPSETVQTMTHAQPILNIPPPVLNPQASDTPHSNTQHFYSGAEMKDQVPRLALGRVHSLP
SLSYLQKVDAWKVNQSSSRSFYDHLPLDSVSPKKNAQDDVSEALNHMLSQDTCLTFGANP
SSQMFQPLSSSHSGSVSPRQVGVVGTGACRGKASESPVNRSHSHSSLSSVVTSVQRDAGP
HNQQIPVAQFNNIIPTTRSLDYQPSFVSGGRGERKNSSAPHMDKSSVHMSPLLSLGRFSD
VSSNLNMSSTLSSSLGSRHGEQSMRASVGATSSVMSLEVDNYAPYWTSRPASPPHTRELN
IEDRIPLYLLNLGIDQSPSTILNPFTHRGPIREPEFSPTDLCTIKGSIGTPTKSTQPSEV
DSLQKETFSSSSQLSADSSASVKHRLSVHERGQPASDRTVKKTFSQVETPPRLNSTVHPS
SNLQQSNAPQNEGNFGLSSQFSSESMTPPGPREVIKEDEDSFVGSGTLREIRRLLGRAES
LVSGRSSLTSSPGSHRLSESDTSLVSLGRNIQGYHDDTSLSAGGNLSLLLTRSSSDSALK
GSLSSSQRPQQIDRTTIEPTALSLSREESLKSRDLCATPRRAEPEGCSAADQDKAKPPTV
TSAMQINVPSIAENQDQTEDAVFGSSENDSSHVSAEVESMSDSSSESSLAARVAKLLQSE
SPVSVVTSRPSTSDPEDSRAREWILMKVSGRRCESLELNAEDRERIEDIKRELLLNTKYT
KWSSDSEGSAQSSAGPESQLSKGCVGLRKMENCNSDQLLKVNSKPLETVPFYTPIQQDLE
ARVRQIALREGLSSQPLTSITISTTRLTPSPQSPSHDHITATEELDSVGPDHETLESTSQ
MRLQPAVILNVSGREKETAREEQQSEENKGEDMTDDDKENIVTNNPQSIHRIPHMDFNAT
GSNQILSSASSDSAFDKTSHLSHIHVTLSPKPKHHSNPNYLSRLSSQNTSKDVPPPAVSS
MTGERLQSIHRISNSNHARSYEHREPVQGQNAGSVSAHLQAGYPQTFAPSQRLAGTSRTL
SVQAGVPALLPYKPYGSSELFYIPRADQELSPCHSDTTVESSHPGSDDAVPPLFNTDILG
SRELEDNIIASKHKEGIYSKRTNMKRVPSVSGNGLPESATTLAGQNDNTVPEAYVFKKSM
DTVGIDEEYREEEENFVPLHMEADYSTDDVHLHTSIIQEPKLPLEPHHLPSQPIRTSYKG
YKTKQDRTPHDVSIEISSSLDQLWRRFSEKWSMEETRPANEGETSLLDRLERLSRLIHST
TPTDLNIQQSHCRKVEYYRRSDQEDGTMHGEEQRESVQLDVAPQQAWPEHEEGQDRVHRC
PAERDESASVETSSSLSTIDTERLLRAFGPHRVTSKGQKSSDSLLRLYNTIHMQKTGRRK
PRPKHVAVSVATNDVSTDDSTVSADSLSSSSTLPRHSQRRVSQNLNSKKSKVKLVSRGVQ
AGDFEIVTNGTRRHTRDVGTIFPSPGAFKDVRSSNTLCRNIQSGFPIPTAFTSKPTQTLT
APKKDPSNKSIRTRYPNGVSWFIAADELKCDGHKENQPQNESAPYPRVWFEPYTRTRPWR
ETTREPLRERQNQQEQERPTESITATEIDISDKPSALVRLSLQEALELHRPEFVSRSRER
MKRLGLLVEERRLQEVFNREREELFNCPAPSRPYRPAAPVPHKRVVPRREMVQRSKEKYA
QLPEVQRRKEEERRQAEYRSYRLNAHLFNKKVTNRVLGRRAPWQ
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgagacccccaccagcactgaccaaactctcactcatacactccaaacaagaggctatt
gcgtctgttgctacatcctcccaaaacagtcactccaaaactggcttaattccattattg
gacctaagcgatcaacgttcctctcccattcactctcaaacaacagctacagatcctagt
ggaccttcagagactgtgcaaacaatgacacatgcccaacccattttaaacattcctcct
cctgttttaaatccacaagcctctgatacacctcactccaacactcagcacttttactct
ggtgcagagatgaaagatcaagtccctcgtctggcccttgggagagtacattctcttccc
agtctgagctatttacaaaaagtagatgcctggaaagtcaatcaaagttctagcaggtcg
ttttatgatcatttgccacttgatagtgtgtcgcccaagaaaaatgcacaggatgatgtt
tctgaagcacttaaccacatgctttctcaagacacatgtctgacatttggtgctaatccc
agctcccaaatgtttcagccactttcctcttctcattctggaagtgtctcaccccgtcag
gtgggtgtagttgggactggtgcgtgcagaggaaaagcatctgagtcacctgtcaatcgc
tcacactctcactcctccctaagctctgtggtgacctctgttcagagagatgctggtcca
cacaatcagcaaattccagtagcacaatttaataacatcattccaactaccagatcattg
gactatcagccatcctttgtttcaggtggaaggggtgaaagaaagaatagctcagctcct
cacatggataaaagctcagtccatatgtctcctctcctcagtctggggcgcttcagtgat
gtgtcatcaaacctcaacatgagcagcactctttcgagctctctaggcagtcgccatggt
gaacagagtatgcgggcatcagtgggagccacctcttcagtaatgagtcttgaagtagat
aattatgcaccctactggacctccagacctgcgtcccctcctcacactagagaactcaac
attgaagacaggatccctctgtaccttttaaatttgggtattgaccagtcaccttcaact
atcttaaatccatttactcatcgaggaccaatcagagagcctgaattctctcctactgac
ttatgtaccatcaaaggctccataggaacaccaactaaaagcacacagccatctgaagtt
gacagtcttcagaaggagacattctccagttctagtcagctctcagctgactccagtgct
tctgtcaaacaccgattgtcagtgcatgagcgaggccaaccagccagtgacagaactgtg
aaaaaaacgttcagccaggtggaaacgcccccaagacttaattcaactgttcatccttca
tcaaacctacaacagtctaatgctccacaaaatgaaggaaactttggcctttctagccaa
ttcagctcagaatctatgactcctccaggtcccagagaagtgataaaggaggatgaagac
tcttttgtaggctctggcacactgcgtgaaatcagacgtctgctgggccgggcagaaagc
ctggtttctggtcgttcctctctgacttcctctcctggctcacaccgcctctcagagagt
gacacatcccttgtttcactgggacggaacattcaaggttatcatgatgacacatccctg
tcagctggtgggaatctttctttgctgctgactcgctcttcatcagattcagctttgaaa
ggaagcttgtcatcctcccaaaggcctcaacagattgaccgcacaactatagagcctacc
gctctctctttgagcagagaggaaagtttgaagtcacgtgacctctgtgcgaccccaaga
cgggctgaaccggaaggctgcagtgctgcagaccaagataaggcaaagccacctacagtc
acatctgccatgcagataaatgttccttcgatagcagaaaaccaggaccagactgaagat
gctgtgtttggctcttctgagaatgattcttctcatgtctcagctgaggttgaaagtatg
agtgacagtagcagcgagagttcattggctgccagagttgccaagctcctccagagtgag
tcacccgtttcagtggttacaagtcggccaagcaccagtgatccagaagacagccgtgca
agagaatggatcctgatgaaggtttctggccgccgatgtgaaagcttagaactaaacgct
gaggacagagagagaattgaagacatcaaaagagagcttctactgaacaccaaatacacc
aagtggagctcagattctgagggcagtgctcagtcgagtgctggtcctgaatctcagctg
tcgaagggctgtgttggactgcgtaaaatggagaattgtaactcagatcagctgctgaaa
gtcaattcaaaacctttggaaacagttccattttacactcctatccaacaggatctagag
gccagagttcgccagattgctcttcgagaagggctcagttcccagcctttaacttctatt
actatatcaaccactcgcctcactccgtctccacagtcaccatcacatgaccatatcact
gctactgaggaattggacagtgttggtcctgaccatgagactttagagagcacgagccaa
atgagacttcagccagctgttatacttaatgtatctggcagagaaaaggagacagcgaga
gaagaacaacaaagtgaagagaacaaaggagaagatatgactgatgatgacaaagagaac
attgttacaaacaatccccagagtatccatagaatacctcacatggactttaatgctact
gggagtaaccagatattatctagtgcgtcatcggattcagcctttgacaagacgtcccat
ctctctcacatacacgtcaccttatcgcccaaacccaaacaccattccaatccaaactac
ttaagcagactatccagtcaaaacaccagtaaagatgtcccacctccggcggtgtcaagc
atgactggtgagcgtctgcagtctatacaccgaatctcaaattcaaatcatgccagatca
tatgaacacagagagccagttcaaggccagaatgcaggaagtgtcagtgcacacttacag
gccggatacccacaaacctttgctccctctcagaggctggctgggacatccagaactctc
tctgttcaagcaggtgtccctgccctgttgccatacaaaccttatggaagctcagagttg
ttctacatcccgcgagctgatcaagaactttctccttgtcactctgacacaactgtagaa
agctctcacccaggttctgatgatgctgtccctccactctttaatacagacattttaggc
tctagagagctagaagacaacataattgcatcgaaacacaaggaaggcatctacagtaag
aggaccaatatgaagagagttcccagtgtgtcaggaaatggtcttccagaatcagcaacc
actcttgctggccaaaatgacaataccgttcctgaagcttatgtttttaagaagagcatg
gacactgttggcattgatgaggagtatagagaggaggaagaaaattttgttcccttacac
atggaggccgactacagtacagatgatgtgcatcttcacactagcattattcaggagccc
aaattaccactagaaccacaccatttaccttctcagccaatcagaacgtcttacaaggga
tacaagacaaagcaggacagaacacctcatgatgttagcatagagattagcagttctttg
gaccagctgtggcgtcgcttcagtgaaaaatggagcatggaggagacaagaccagctaat
gagggagaaacgtcactgcttgatcgactggagcgtctgtctcgtctcattcacagtacc
acaccaacagacctaaatatacaacagtcacactgcaggaaagtagagtattataggagg
agtgatcaagaggatgggaccatgcacggggaagagcaaagagaaagcgttcagttagac
gtggctccacaacaagcttggcctgagcatgaggagggtcaggacagagtgcatcgctgt
cctgctgagagagacgagtctgcaagtgtggagacgagcagtagcctgtccactattgac
acggagcgactgctgcgagcttttggacctcaccgggtcaccagtaagggacagaaaagc
agtgacagcttgctcagactttacaacaccatccatatgcagaaaactggccgaaggaaa
ccccgtcctaaacatgttgctgtctctgttgctaccaatgatgtgagcactgatgactcc
acagtctctgctgattctttatcatcttcaagcactttaccccgtcattcgcaaagacgt
gtgtcccaaaacctaaattctaaaaagtcaaaggtcaaactagtcagcagaggtgtgcag
gcaggtgattttgaaatcgttacaaatggtacccgcagacacactcgggatgtgggcacc
atctttccctcaccaggtgctttcaaagatgtccgttcatcaaacacattgtgcagaaac
attcagagtggctttcccatccccactgctttcacatctaaacccacccaaaccctgact
gctccgaagaaagaccccagcaacaagagcatccggacacgctacccaaacggtgtgtca
tggttcatcgcagccgatgagcttaagtgtgatggtcacaaggaaaaccagccacagaac
gaatcagcaccttacccaagagtctggtttgagccttacaccagaaccagaccctggaga
gaaacaaccagagaaccactaagagagagacagaaccagcaagaacaagagaggccaaca
gagtctataacagctacagagatcgatatcagtgacaaaccctcggctcttgttcgactt
tcacttcaggaagctctggagctccatcggccagagtttgtatctcgttcacgtgagcgg
atgaagcgtctgggtttgctggttgaggagaggaggttacaagaagtcttcaacagagag
agagaagagctcttcaactgccccgcaccatcacgtccatacagaccagcagctccagta
ccccataaacgagtcgttccaagaagagagatggtccaaagatccaaagagaaatatgct
caacttcctgaggtccagagaagaaaggaagaggaaaggagacaggcagagtaccgctct
taccgcctcaatgctcatctctttaacaagaaagtcactaatcgtgtgttgggaaggaga
gcgccctggcagtga
DBGET
integrated database retrieval system
