Carassius auratus (goldfish): 113078670
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Entry
113078670 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: probable helicase senataxin
KO
K10706
ATP-dependent RNA/DNA helicase, senataxin [EC:
5.6.2.5
5.6.2.3
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113078670
Enzymes [BR:
caua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
113078670
5.6.2.5 RNA 5'-3' helicase
113078670
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113078670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
SEN1_N
AAA_19
AAA_30
UvrD-helicase
AAA_22
AAA_16
ResIII
nSTAND3
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
113078670
NCBI-ProteinID:
XP_026106784
Ensembl:
ENSCARG00000070415
UniProt:
A0A6P6NEL2
LinkDB
All DBs
Position
Unknown
AA seq
1974 aa
AA seq
DB search
MEKCLWCTTSLEVEGDVAIVTMLRRYSSGQLSEREMDSLNEDLSCCLECVVEYHRARDKV
PDLHKHLWEMEKARLMHLLGTVLDKELEEDDIFIIEDDHEEPVSKISPAELHDRLRFPLF
EVLKYPYLLCHRDLCDLVVKALCKLQDMKQSLTVFEKYQGTYLLLVHPNEQVRRWAIDTA
KTMKSVDRDAYYDLQEIFFCMFYVIELGISLDFPDLEPESYAGGTVQMLPSHLYDSQNKK
NYWLGICMLLTQLSADAMDSLFMGQFNIPLCILNTMEGLKNEDNPASDPFWPALHCFMVI
LDRLGSKIWGQVDPNMAFQTITGAASYVAEIRNIQKKTMRGMVKVEPEYDDNMVTCSQMV
YDCYASEKPNQASGSLSNSGISSNYMIYEDMQSLVTVLDSEMGQSMRVYGSTFLWFIPFV
RSIMELPELNASYISEVIHYLCDKIRENRHMLTGQTSVCDKVTEFFTRILIQIVELHSAE
GRMGILSRCAQKWVQEIVLCIILSDEPHAPPDRMGGFHGVSSTSYNLGMVGRQPASGGGI
GAIIPGCMKLIRLLLKEGIRRSVPGSTLFFNRLMQLRGVANKRWNLTRSESDELQKCLLK
VVRLMPERPDSPLSVVPFSCAPSVEAATNTVISRNSVPTLHQQQHEDQEAGPSRAGDAAA
FIKEEPLWNYGNNISEDLCSGLEKIAKVKKEPPDPVSVSKLRTPVQLERIKPDLGKVQEI
RSRLNDNQNLSKIKAIAKQKPDESLKPFPLTSVKVEGGFGAAEEEDDDDEPLDVRRTSLI
KSVNHKVESSDSEIDSSAVGKTPNRSMGSSKPHVESSTIVISDSDSDNDEGPNDVLRSPE
DHVLPESPGRDYDDLSESQVFEFETQQYVPSSWDTSDFDASVLTKPKSDQLLKPQVDKAP
CEASPSSETELNPDEDIERTCQQAEDKIIEQQQQPQEPVDSSASSLSKASSTAESWDKFG
KPKPLDQIKEPQQPQEPADSCAPSLSKASSTAESWDKFGKPKPLLVKSAKTTPSDKKKPL
IIDALALKIRGHPWKRNSTSQDEEEPSSSTTPSCGTSSSPSSSCVSSPYFPAPSSRGTPA
IVPPKKVRKVVEPESTAERLGLKKKERKAFELSQRSLDCVAKLRCHGQKVQVEPQQKIRR
VRRVTKTTSQKRIVKGNKKLMGSQDIQFFKQIREKHQRPTTLASKPAKINQPAEVHLPEH
TVASSEAGDFFPYPQLDPDNENAESEIRSKGDGVGSDKRIESKYFQASETADVNQEEKPS
LTSEDDDDEEWMVLTQTGPTDMELCSQMEPLEEDELFLTQRDPVDMDIDPDSEPDTPEQP
VLTPKPIQTPIGGNDDHLFLKPSMSPMSQKKAKPSTTKIYTPSSRSASLVHEMEKVAKPL
VANVAKAKIPRLPPAMPPPKTFQPLQPPQLPKPLPSQQSPYAPLLVPSTKISSTPDPPSY
KVYQRPEAPVNKPVPATDQSPKFDLLFLTQAILKWDYRMLDNYKAFGSPNDLCQLPLKKV
PVMFPSYMEYFNTLYPLLQINAFEEIASEWLKEGRVKCHLSVQGIEYSNRTASGQFIASI
SQEIDTKQLYPKESDLVILWLPDNTGAYAHNEPHFHEPHPHFGYVSRSSVSNRGPGSKLT
LNLTIQTRGNVSSVNSQPVLCEVIGSLISTFREFNALCSLRNGPMLRPLLNPHASYFTHT
LDSPSDLDSPEFNRDQARAIACGLAMIKRTHKTPRFLLIHGPPGTGKSKTIGGLLYKLLS
SGINSAAPVGNLHSKSRRTRVLLCAPSNAAIDSLMKKVILIFKDKCRNINAPQGNCGDIN
LVRLGNERTMSKALKPFSLDYQTKARAQRAQQNCRADINRRKEQLDQNIDNLSKRCAKTK
KDSSEFKTLMEQKLQFLKEREGLSRRIKECWIKRQESQAFVLQNAHVICCTLSTSGSTVL
ESTFRRLGNEMFSCVIIDEASQAKETETLIPMMYRSPSVILXGDPNQLPPTLSP
NT seq
5924 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtgtctgtggtgcaccacgtccctggaggtggagggagacgtggcgatcgtc
accatgttgcgtcgctacagctccggacagctgtctgagcgagagatggactctctgaat
gaagacctcagctgctgtctggagtgtgtggtggagtatcatcgagccagagacaaggtc
cctgatctgcacaagcatttgtgggaaatggagaaggctcgactcatgcatttgttggga
accgttctagacaaggagctggaggaggatgatatctttattatcgaagatgaccacgag
gagccggtgtcgaagatctctcctgcagaattgcacgaccgcctccgtttcccgctcttt
gaagttctaaagtacccgtacctgctttgccaccgtgatctgtgtgatttggtggtaaaa
gccttgtgtaagctgcaggatatgaagcagtctttgactgtgtttgaaaagtatcaagga
acatatctgcttctcgttcatcccaacgaacaggtgcgccgttgggcaatcgatacagca
aagaccatgaagagtgtggatcgggatgcctactatgaccttcaggagattttcttttgc
atgttttatgtcattgagcttggaatatctttggactttccagatttggagccagagtct
tatgcagggggcactgtacaaatgctgccctctcacctctatgattcacaaaataagaag
aactactggctaggtatctgtatgttactaacacagctcagcgctgatgcaatggactcc
ctgttcatgggacagtttaacatcccactttgcatactcaacacaatggaggggttgaaa
aatgaggacaatccagcttctgacccattctggccagcccttcactgttttatggtaatt
ctggaccgacttggttctaagatctggggtcaggttgaccctaatatggctttccagaca
atcactggagcagccagctatgttgcggaaataaggaacatacagaaaaaaaccatgcgg
ggcatggttaaagtggagcctgaatatgatgacaatatggtgacttgcagtcaaatggtg
tatgactgttatgcctccgaaaaaccaaaccaagcatctggttcattgtccaacagtggt
atttccagcaactatatgatctatgaggatatgcagtctcttgtcaccgtgcttgattct
gaaatgggccagagcatgcgtgtatacggaagcacttttctatggttcattccatttgtc
cgttccataatggaacttccagagctcaacgcttcctatattagtgaagtcatccactat
ctttgtgataagatacgagaaaatcgacacatgctaaccggacagacaagcgtgtgcgat
aaagtgaccgagttcttcactcgtattcttattcaaattgttgagctacattctgctgaa
gggcgaatgggaatactttctcgctgtgcccaaaagtgggtgcaagagattgtcttatgc
attatcctatcggatgaaccacatgcgccaccagacaggatgggtgggtttcacggagtc
agttcaacctcatacaaccttgggatggtcggaagacagcctgcatctggaggtggcatt
ggtgccataattcctggctgcatgaaactgattcgactactgctgaaagaagggataagg
agatctgtcccaggctcaaccctcttttttaatcggcttatgcaattgcgtggagttgca
aacaaacgatggaatctaacgcggtctgaatctgatgagcttcaaaagtgtttgttgaaa
gttgtccggttaatgccagaaagacctgattctccactctctgttgttccattctcatgt
gcaccatcagtggaggcagctacaaacactgttatttccagaaattcagtaccaaccctg
catcagcaacaacatgaggaccaggaggcaggaccaagcagagcaggagatgcagctgct
tttatcaaagaggagccactttggaattatggaaataatatctctgaggatctatgcagc
ggtcttgaaaaaattgcaaaggttaagaaagaaccccctgacccagtgtcagtttcaaag
ctgagaacacctgttcagttggaacgtattaaaccagatctgggtaaagtgcaggaaatt
agatcccgattaaacgacaaccaaaatttgtcaaagatcaaagccattgccaaacaaaaa
cctgatgagtccttaaaaccttttcccttgacatcagttaaagtggaaggtggttttgga
gctgctgaggaggaggatgatgacgatgaaccccttgatgtcagacgaaccagtttgata
aaatctgtcaaccacaaagttgaatctagcgattccgaaattgacagtagtgctgttgga
aaaactcctaacaggtccatgggcagctcaaagccacatgtggagtccagtaccattgtc
atctctgattctgattctgataatgatgaagggccaaatgacgtcctaaggtctccagaa
gatcatgtcttgcctgagagcccgggtcgtgattatgatgatctcagtgaatcacaggtc
tttgagtttgagacgcagcaatatgtgccatcttcttgggatacttcagattttgatgca
tcagtcttgacgaaaccaaaatcagaccaactactcaaaccacaggtggataaagctccc
tgtgaagcgtctccaagttcagagactgaactaaatccagatgaggacattgagaggacc
tgtcagcaagcagaagataagatcatagaacagcagcagcagccgcaagagccggtggat
tcaagtgcatcgtcactgtccaaagcatccagtactgcagagagctgggataaatttggc
aaaccaaaacctctggatcagatcaaagaaccgcagcagccacaagagccagcggattca
tgtgcaccgtcactgtccaaagcatccagtactgcagaaagctgggataaatttggcaaa
ccaaaacctttgctggttaaaagtgcaaaaacaactccatctgataagaaaaagccactg
ataattgatgctcttgctcttaaaatcaggggccacccttggaaacgcaactccacatct
caggacgaagaggaaccttcctcttcaaccactccgtcatgtggtacatcttcctctcca
tcatccagctgtgtttcttcaccttattttcctgcccccagttcacgtggcacccctgcc
attgttcctccaaagaaagtgcgcaaagttgttgagccagaatcaacagcagagcgtttg
ggattaaaaaagaaggaaaggaaagcctttgaactttctcagcgttcgctggattgtgtt
gctaaactgaggtgccatggtcagaaagtgcaggtagaaccacaacagaaaataaggcga
gtgcgtcgagtcactaagacaacttcacagaaacgtattgtaaaaggcaacaagaaactt
atgggttcacaagatattcagtttttcaagcaaattcgtgagaagcatcagaggccaaca
acattagcttccaaaccagcaaagatcaatcagccagctgaagtgcacttgccagaacat
acagttgcaagcagtgaagctggtgatttctttccctatcctcagctggatcctgataac
gaaaatgccgaatccgaaatccgttctaaaggtgatggggttggaagtgataagagaata
gaatccaagtacttccaagccagtgagactgctgatgtaaaccaggaagaaaaaccttcc
ctgacatcggaggatgatgatgatgaagaatggatggtcctcactcagacgggacccact
gatatggaactgtgctcccaaatggagccattggaggaagatgaactctttcttacccag
agagatccagttgacatggacattgatccagatagtgaaccggataccccagagcaacca
gtgttgacacctaaacctatacagactcctattggtggaaatgatgatcatttgttcttg
aagcctagcatgtcacctatgtctcagaaaaaggccaaaccttctaccacaaaaatatac
acccccagctcccgcagtgcctcacttgtccatgaaatggaaaaagtagctaagcctctt
gttgctaatgttgcaaaagcgaagattccccgactgcccccagcaatgccacctccaaaa
acatttcaacctctccagcctccacaactcccaaagccacttccttcacaacaatctcct
tatgctcctttgttggtcccgagtactaaaataagctctaccccagatccaccatcttac
aaggtataccaaagacctgaggctccagttaacaaaccagtacctgcaacggatcagagc
ccgaagtttgaccttttgttcttgacccaagcaatccttaaatgggattataggatgctt
gacaactacaaagcatttgggagtccaaatgatctatgccaactaccgctgaagaaggtg
ccagttatgtttcccagctacatggagtacttcaacaccttatatcccctgctgcaaatt
aatgcatttgaagagattgctagtgaatggctcaaagagggccgagttaagtgtcaccta
agtgtccagggtatagaatacagcaatcgcacagctagtggccaatttatagcaagcatt
tctcaggaaatcgatacgaaacaactatacccaaaagaaagtgaccttgtgatactttgg
ttgccggacaacaccggagcatatgcccataatgaacctcatttccatgaaccacatcct
catttcggttatgtgtcccggtccagtgtttctaacagaggtccaggttccaagttaacc
ctaaacttgacgattcaaactcgtggtaatgtatcttcggtgaattcccaacctgtactc
tgtgaagttattgggtcattgatcagcactttccgggagttcaatgcactgtgttcgctg
cgaaatggaccaatgttgcgacctcttcttaatccacatgcatcttatttcacacacact
ctggacagcccatcggacctggattcaccagagttcaacagggaccaggcgagagcaata
gcttgtggtcttgccatgataaagagaacgcataagaccccaagatttctccttattcat
ggtcctccaggaaccgggaagagtaaaaccattggtggcctgttgtacaaacttctgtct
tcgggtattaacagtgctgctcctgtggggaaccttcactcaaagtctcgaaggacccgt
gttcttctctgtgcaccctcaaacgctgccatcgacagtctgatgaagaaagtcattttg
atctttaaagataaatgccgaaacatcaatgctcctcaaggtaactgcggtgacataaac
ctggtacgattgggaaatgaaaggaccatgtccaaggcactaaaacctttcagcctcgac
taccagactaaagctagagcacagcgagcccagcaaaactgtagagctgacataaacagg
cggaaagagcaactagaccaaaacattgacaatctctccaagcgatgtgcaaagacgaag
aaggattcttctgaattcaagacgttgatggagcagaagttgcagtttctgaaggagaga
gaaggactgagtcggcggattaaagagtgttggattaagcgacaggaaagtcaagctttt
gtgttgcaaaatgctcatgtgatctgctgcacgctcagcaccagtggaagtactgtcctc
gagagcactttccgtcgtctcggaaatgaaatgtttagctgtgtcatcatcgatgaggct
agtcaggctaaagaaactgagactctgattccaatgatgtaccgaagtccttctgtaatc
cttnttggtgatcccaaccagcttccaccaacgttgtctcccag
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integrated database retrieval system
