Carassius auratus (goldfish): 113078795
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Entry
113078795 CDS
T07313
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113078795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113078795
03019 Messenger RNA biogenesis [BR:
caua03019
]
113078795
04121 Ubiquitin system [BR:
caua04121
]
113078795
Enzymes [BR:
caua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113078795
Transcription factors [BR:
caua03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
113078795
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113078795
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113078795
Ubiquitin system [BR:
caua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113078795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_2
zf-CCCH_2
zf-UDP
zf-RING_2
Nup35_RRM_2
zf-C3HC4
DZR_2
Rtf2
Motif
Other DBs
NCBI-GeneID:
113078795
NCBI-ProteinID:
XP_026106879
UniProt:
A0A6P6NEU2
LinkDB
All DBs
Position
Unknown
AA seq
353 aa
AA seq
DB search
MSRSPEVKEDPMECPLCMESLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQKIKNEKKQKQNERKQKITENRKHLSSVRVVQRNLVFVVGLSQRL
ADPEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVV
VDGRTLKASLGTTKYCSYFLKSTQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQELYKTNPSFLQSSTGAGEKTKGKSGTSQSSSSNNKEAWPSLQTTGKTTNGLPEHYKTP
PLDGGSDSENMTPDGLDTELGLGSITGLPPFTSDCDPVSPTNRPTDSIGISNG
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcagccctgaggtgaaagaggaccccatggagtgcccgctgtgcatggaatca
ttggagattgatgacgtcaatttcttcccttgcacctgtggctatcagatctgccgcttc
tgctggcatcgcatacgcacagatgaaaacggcctctgcccggcctgcagaaagccctat
ccagaagaccctgcagtatacaaacctctctctcaagaggaacttcagaagataaagaac
gagaaaaagcagaagcagaatgagcggaagcagaagatcacagagaaccgcaagcatctc
tccagtgtgcgagtcgtccagagaaacctggtgtttgtggtgggcctttcgcagagactc
gctgacccagaggtcttaaaaaggccggagtatttcgggaagtttgggaagattcataag
gtggtcatcaataacagcacttcttatgctggctcacagggtcctagtgccagtgcctac
gtcacttacattcgatcagaagatgccctccgagctatacagtgtgttaacaatgttgta
gtagatggcagaacacttaaggcttctttaggtacaacaaaatactgcagttattttctg
aaaagcacgcagtgccccaaaccagactgcatgtatcttcacgagctgggagacgaagct
gctagtttcacgaaagaagaaatgcaggcagggaaacatcaggaatatgaacagaaactc
ttacaggagctctataaaacaaaccccagcttcctgcagagctcgacaggggcaggggag
aagacaaagggcaaatcaggcacatcacagagttccagtagtaacaacaaagaagcttgg
ccttcgttacaaaccacaggaaagacgaccaatgggcttccagaacactataagacccca
cccctagatggcggctcagactctgaaaacatgactccagacggtctggacacagaactg
ggccttggctccatcactggcctgcctcccttcacgtcagactgtgaccctgtcagccca
actaacagacctacagattccatcggaataagtaacgga
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integrated database retrieval system
