Carassius auratus (goldfish): 113078816
Help
Entry
113078816 CDS
T07313
Name
(RefSeq) collagen alpha-4(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113078816
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
113078816
09142 Cell motility
04820 Cytoskeleton in muscle cells
113078816
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113078816
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113078816
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
113078816
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113078816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
113078816
NCBI-ProteinID:
XP_026106913
UniProt:
A0A6P6NED5
LinkDB
All DBs
Position
Unknown
AA seq
1639 aa
AA seq
DB search
MGDSGDKTERCDGRDCSVCQCFPPKGERGNPGVLGQQGPQGPRGLPGPRGLNGEKGRSGP
VGLPGVSGPKGDQGFQGEKGHAGLDGVPGHPGPGGPPGFPGKDGCNGARGKLGLNGEIGR
PGLPGAKGLPGLKGAKGDTSTSLTFFPGTPGDDGLSGISGPQGLKGLCGPGGPPGKMGPD
GFMGLQGLSGRRGPPGDPGRLLPGPKGDEGDHGPQGEPGPFEYVEPNPEDCVKGDKGKKG
PRGICGVPGPEGCEGPPGEEGQKGIIGLSGPRGLPGCPGRRSSPGPKGPCGDIGLPGLCG
IQGPKGCSGDPGPKGNPECYYNHVIGPPGDRGLPCAAGLPGDRGMLGIPGPPGDSGACIT
GPEGECGLPGLNGLKGEKGDPGNLCGSLLNGEPGKPGCPGPKGQCGNPGNSVCGYYCLTG
ERGETGQGGNRGPPGLKGVQGRKGPDGGCACDPLGDLPGDPGPPGPPGVPGCPGKTGCQG
PPGDVGPTGKMGVRGVTGPRGFIGVRGAKGEKGDVMMMCRKGDKGDAGSVGLCGKPGCSG
RKGADGKIGAPGDPGPMGDCIVGPPGNRGCPGAAGVRGVRGPAGLPGPNMMGSVGRRGQQ
GCQGPQGQTGPPGPKGIQGDTLPCGPGIRGAPGCKGMPGCKGEKGKLGNPGCIGQNGPCG
PKGEIGDPGDCRVTGLTGPVGCSGDPGDTGPDGQSVCGSPGTPGNRGCQGLKGCSGDCIT
GAPGPKGPSGIQGCQGPKGVPGPTGPNGLQGACGVPGFPGRKGENGMDGTPGAPGCPGGR
PEHCDKGQAGPPGNTGPPGFTGPRGCPGEKGSPGEPGSSCIGAKGECGMLGTPGNQGCAG
LQGPPGFEGDCGNPGCPGPKGLPGCPGQDGCPGNKGRTGPLGPPGPKGIRGFSGYPGCPG
VNGTKGQKGCIGPPGPLGDITPVLLKGQVGPPGPVGENGFCGERGNKGDPGPPGQPGCAG
HNGPPGSECGQCGPAGIPGLCGVPGARGQRGPKGIVGFPGDNGDQGDPGLCGLPGTPGFP
GFDGPKGDKGEFICEPGLIGERGPCGDRGVSAPPGGEGDCGDPGPQGPRGCSGPPGPPGN
NGLTGPPGVVGPPGPCGRHGPEGPPGCPGPPGPKGNPGRIGLRGPPGPPGLHGLDGLEGY
NGEKGCRGQGINGCRGNKGLTGDKGTPGDPGLRGPSQTGVRGPNGMCGCQGDPGPMGPPG
CRGPECKTPKHGPCGERGCAGPDGPPGPKGEQGEAGCVFTVSGDCGDPGCKGDSGCKGER
GSCGPSGLPGCEGLKGPKGERGQCGLMGLPGLPGTRGDCGPRGLCGPKGDIGDPGLKGDP
GTVIIPPTPCPLLPGPPGAPGAPGPVGEAGENGPNGTEGPNGIKGQKGDSGISGPTGPEG
PQGLSGNPGEIGEKGAKGSQGPQGSVGDEGPPGPSSSGFLLVIHSQSEIVPTCPSGLTEL
WNGYSLLYLEAQERAHIQDLGQAGSCLRMFSTLPFSCCNMNGCDYASRNDKSYWLSTNAS
IPSNSTLRGMEIQPHISRCVVCEVSSPAITLHSQDGNTPECPFNWRTLWVGYSFLMHTGS
GDEGGGPSLASTGSCLQEFHSQPFVECQGPLGTCQYSPTFYSFWLTRVNMEPFNSDPYST
VLTEENQLDSISTCSVCVT
NT seq
4920 nt
NT seq
+upstream
nt +downstream
nt
atgggggacagtggagacaagacagaaaggtgtgatggtcgagactgcagcgtctgccag
tgtttcccccccaaaggagagagggggaatcctggtgtgttaggtcagcagggcccacag
gggcctcggggtttgcctggcccccgaggacttaatggtgaaaagggtcgaagtggaccc
gtaggattgcctggggtctccggcccgaaaggagaccagggatttcaaggagaaaaaggc
catgctggattagatggagtgcctggtcatccagggcctggtggtcctcctgggtttcca
gggaaggatggctgtaacggagccagagggaaattagggttgaatggtgagataggacga
cccgggctcccaggagccaagggactacctgggttaaaaggagccaaaggagacacgtct
acaagtttaactttctttcctggtacacctggtgatgatggactttctggcatctctgga
ccacaaggacttaaaggtttatgtggcccaggaggtcctccaggaaaaatgggacctgat
ggatttatgggtttacaaggattatcaggtcgaagaggcccaccgggagacccaggaaga
ttactaccaggaccgaaaggagatgagggcgaccacggtcctcagggggaaccaggtcca
tttgaatatgtggagcctaacccagaagactgtgtaaaaggcgataaggggaaaaaggga
ccgagaggaatttgtggagtacctgggccagagggttgtgaagggcctccaggagaagaa
ggacagaaaggcataattgggctctctggtcccagaggccttcctggatgtccaggcaga
agaagctctccaggacctaagggtccatgtggggatattggtcttcctggtctatgtggc
atccaagggccaaagggctgctcaggtgaccccggacctaaaggaaacccagagtgctat
tacaaccatgtgataggaccacctggagatcgtgggcttccttgtgcagcgggacttcct
ggagatcgagggatgctgggtatacctggaccccctggtgattcaggagcatgtataaca
ggtccagagggtgaatgtggtctgccaggtcttaatggactcaaaggagaaaaaggtgac
ccaggaaacctatgcgggtcactcttaaatggggaacctggaaaaccgggctgccctgga
cccaaaggacaatgtggaaatcctgggaattctgtttgtggttactactgcctgactggt
gaacgtggagaaactggacagggtggaaatagagggcctcctggattaaaaggtgttcag
ggaagaaaaggtcctgatgggggatgtgcatgtgacccacttggtgatttaccaggagat
ccgggccctccaggccctcctggtgtccctggttgtcctgggaaaacaggctgtcagggt
cctcctggcgatgttggacccactggaaagatgggtgtgagaggtgtaactggtcccaga
ggcttcataggtgtcagaggggctaaaggagagaaaggagatgtgatgatgatgtgcaga
aagggggataaaggtgatgcaggatctgttggattatgtggaaaaccaggatgtagtggg
aggaaaggagctgatgggaagattggtgcccctggagatcctggacctatgggagattgt
attgttggtccaccgggcaacagggggtgtccaggggctgctggtgtgagaggtgtaaga
ggtccagctggtcttcctggcccgaatatgatggggtcagttgggcgacgggggcaacaa
gggtgccaaggacctcaaggccagacgggacctcctggtcccaaaggcattcaaggtgat
acactgccctgtggacctggcatacgtggagcccctggttgcaaagggatgcctggttgt
aaaggtgagaaaggtaagcttggaaatccaggatgcatcggacaaaatggaccatgtggt
cccaagggagagattggagaccctggtgactgtagggtaacaggacttacaggtccagtt
ggatgttcaggagatcctggtgacactggcccagatggccagagtgtttgtggctcacct
ggcacacctggcaatcgtggatgccagggtctgaaagggtgttctggtgactgtattaca
ggggctccaggaccgaaagggccctctggaattcagggatgtcagggccctaaaggtgtc
cctggacctactggaccaaatggattgcaaggtgcttgtggagttcctggttttcctggt
agaaaaggggaaaacggaatggatggtacaccaggagcccctggttgcccaggtgggaga
ccagagcactgtgacaaaggacaagctggtccacctggtaatacaggaccaccaggcttc
actggaccaagagggtgccctggagagaaaggatcgcccggggagccaggatcttcatgc
attggagccaaaggagaatgtggtatgcttggtaccccgggcaatcaaggttgtgcaggc
cttcagggacctccaggattcgaaggggactgtggaaaccctggatgccctggaccaaag
ggtttgcctggatgtcctggtcaagatggctgtcctggtaacaaagggaggactggccct
ttagggcctcctggaccgaaaggcatcaggggtttcagcggatatccaggttgcccaggg
gtaaacggaaccaagggccagaaaggatgcattggacctccaggacctctgggagacata
actccagtgctattgaaaggccaggtagggccacctggacctgttggagagaatggtttc
tgtggagaaaggggtaataagggggacccaggtccgcctggacaacctgggtgtgcggga
cataatggacctcctgggtctgaatgtggccagtgtggaccggcaggcattcctgggctg
tgcggtgtgcctggtgcacgtgggcagcgtgggccaaagggaattgtgggattcccaggt
gataatggtgatcagggtgatcctggattgtgtggtctgccaggaacccctggtttccct
gggtttgatggtcctaaaggagacaaaggtgaatttatttgtgagccaggactaataggt
gagagagggccatgtggagacagaggcgtgtcagctcctcctggtggtgaaggagactgc
ggtgaccctggcccacaagggcctaggggatgctctggtccacctggaccacctgggaac
aatggcctgactggacctccaggagtcgttgggcccccaggtccttgtggaagacatggt
ccagaaggtccccctggatgtccaggtcccccgggccctaagggaaacccaggaaggatt
ggccttagaggacctccggggcccccaggactccatggactggatgggctggaggggtac
aacggtgaaaaggggtgtcgaggacagggtataaacggttgtaggggcaataaagggctg
actggagacaagggcactccaggagacccagggttgcgaggcccatcacaaacaggtgtt
cgaggtcccaatggaatgtgtgggtgccaaggagaccctggtccaatgggtcctccaggc
tgtcgtggtccagaatgtaagactcctaaacatggaccatgtggagaacggggttgtgct
gggccagatggacctccagggcccaagggagagcaaggagaggcaggctgtgtgttcaca
gtgagcggggattgtggtgacccaggttgtaaaggagactcagggtgtaaaggagaaaga
ggatcgtgtgggcccagtggcctcccagggtgcgagggactaaaaggtccaaaaggtgaa
agaggacaatgtggacttatgggccttccaggactccctggcaccagaggcgattgtggc
ccccgaggactctgtggtccaaaaggagacataggggacccagggcttaaaggagaccct
gggactgtcataattccccctactccttgtccccttcttccgggtcctcctggtgctcct
ggtgcacctggcccggttggtgaagctggtgaaaatggacctaatggtactgagggtcca
aatggtattaagggacaaaaaggagattctgggatttctggacctactgggccagaagga
ccacagggactatctggaaaccctggagagatcggcgagaaaggagcaaaaggatctcag
ggaccacaaggatcagttggtgatgagggtcctcctggaccgtcttcctctggcttcctt
ttggtgatacacagccagtctgagattgtgcccacttgtccttcgggtctaacagagtta
tggaacggctacagtctactatatctggaggctcaggaaagagcacacatacaagacctg
ggccaagcaggttcctgtttacgtatgttcagcacactaccattctcctgctgtaatatg
aatggatgtgattatgccagccgcaatgacaaatcttattggctgtctacaaatgcctcc
attccctctaattccaccctgagggggatggaaattcaaccacacatcagcaggtgtgtg
gtgtgtgaggtgtcatcgccagccattacattacacagtcaagacgggaatacaccagag
tgtccattcaattggagaacactctgggtcggatattcatttcttatgcatacaggatca
ggggacgagggaggtggaccgtctctggcatcaacaggaagctgtttgcaggaattccac
agtcagccgtttgtggagtgccaaggtccgcttggcacgtgccaatattcccccaccttc
tacagtttctggctgactagagtgaacatggagccctttaattctgatccttacagtact
gttctcactgaagaaaaccagctcgatagcatcagcacatgcagcgtctgcgtgacttaa
DBGET
integrated database retrieval system