Carassius auratus (goldfish): 113079070
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Entry
113079070 CDS
T07313
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
113079070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113079070
03036 Chromosome and associated proteins [BR:
caua03036
]
113079070
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
113079070
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
113079070
Chromatin remodeling factors
BAF complex
113079070
PBAF complex
113079070
GBAF(ncBAF) complex
113079070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
113079070
NCBI-ProteinID:
XP_026107051
Ensembl:
ENSCARG00000031497
UniProt:
A0A6P6NFV5
LinkDB
All DBs
Position
5:17402452..17457575
Genome browser
AA seq
1585 aa
AA seq
DB search
MSTPNEPPVGIPHAGPSPGAGLSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHAMQG
QGAADYSQDMHPMHKPMEGMHEKGMGDDMHYGQMKGVSMRSLHSGMGPPQSPMDQHTQGY
MSPHPSPIGQVPEHVPSPMSGGGPTPPQMSQGQSPMMPMDPQGMGQQARGQSAFSPVQLQ
QLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQPVNTGPYNRPLGMPMTHGGPA
TGPCPSPAMQTHTQSSGPKPWPEGQGSETPSAQQKLSVPAPSGRPSPAPPLAPTGTQAVP
STSLTSQPQPQPPAGPGQPSLIIQLQQKQNRITPIQKPQGLDPVELLQEREYRLQARIAH
RIQELENLPGSLPPDLRTKATVELKALRLLNFQRQLRLDVVACMRRDTTLETALNSKAYK
RSKRQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSISGKIQKL
SKAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEY
VANLTELVYEHKAAQAAKEKKRKRKKKKKEAGDAEGMGAIGPDGELIDETSQMSELPVKV
IQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESGSEFEEEDDEDVVSRAESE
EKKVIDPNSDEVSETAAKHIIESAKQDVDDEYSVQAGETSSQSYYGVAHAVIERVEKQST
LLVNGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMELKRLNGPYL
IIVPLSTLSNWVYELDKWAPSIVKIAYKGTPSMRRSFVPQLRSGKFNVLITTYEYIIKDK
HILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPELWALLNF
LLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQ
LPEKVEYVIKCDMSAIQKVLYRHMQGKGILLTDGSEKDKKGKGGAKTLMNTIMQLKKICN
HPYMFQHIEESFAEHLGYPNGIINGPDLYRASGKFELLDRILPKLKATNHRVLLFCQMTT
LMTIMEDYFAYRNFLYLRLDGSTKSEDRAMLLKKFNEEGSQYFVFLLSTRAGGLGLNLQA
ADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQK
VIQAGMFDQKSSSHERRAFLQAILEHEEQNEEEDEVPDDETLNQMIARNEDEFEFFMRMD
LDRRREDARNPKRKPRLMEEDELPSWILKDDAEVERLTCEEEEEKIFGRGSRHRRDVDYS
DTLTEKQWLRAIEDGNLEEIEEEIRLKRRKRRRHVDKDLRREEGDKAKKRRGRPPAEKLS
PNPPKLTKQMNAIVDTVINYRDASGRQLSEVFVQLPSRKELPEYYELIRKPVDFKKIKER
VRSHKYRSVSDLEKDVMLLCHNAQTYNLEGSQIYEDSIVLQSVFKSARQKLASEESDDDS
NDDDDDDDEDDDEESEEESKSVKVKIRLSKREERSQDKGKKRPSRGKAKPVVSDDDSEED
QEENFKRKMSSQRGATATMSEEEMS
NT seq
4758 nt
NT seq
+upstream
nt +downstream
nt
atgtccacccccaacgaaccaccggttgggataccccatgctggtccttcaccaggtgct
ggcctgtctccggggcccatcctagggcccagccctggacccggcccatctcctggctct
gtacacagcatgatgggccccagtccagggcccccaagtgtcccacatgctatgcaggga
caaggggctgcagactattcacaggacatgcacccaatgcataagcctatggagggaatg
catgagaaggggatgggagatgatatgcactatggacaaatgaagggggtgagcatgaga
tccctgcacagtggcatgggtcctccacagagccctatggatcaacacactcaaggctac
atgtccccccatccctcgccgataggccaggtgccagagcatgtgcctagccctatgtca
ggaggagggccgaccccaccgcagatgtctcagggtcagtcacccatgatgcccatggat
ccacaggggatgggacagcaagccaggggtcagtctgccttcagcccagttcagctacag
caactcagggctcagatcctggcgtacaagatcctgggccggggtcagcctctgcctgag
aatctgcagttagcagtgcagggcaagaggagcctccccaccatgcagcagcagcagccc
gtcaacactggcccctacaacagacctctaggtatgccaatgactcacggagggcctgct
acgggcccgtgtccctctccagcaatgcagactcatacccaaagctctgggccaaaacca
tggcctgaaggtcaaggctcagagacccccagtgctcaacagaagttgtcggtcccagct
cccagcggcagaccctctccagcccccccgctggcccccactggcacacaagctgtgccc
agcacctccctcacctcccaaccccaacctcagcccccagcaggaccaggccagccctcc
ctcatcatccagcttcagcagaaacagaatcgcatcactccaattcagaagcctcagggt
ctggaccctgtcgaactcttgcaagagagggaataccgtcttcaggccaggattgctcac
agaattcaggagctggagaatctgccagggtcactgccacctgatctgcggactaaagct
actgtggagctgaaggccttaagactgctcaacttccagcggcagctgaggctagatgtc
gttgcctgcatgcgccgagacacaactctagagacggccctgaactccaaagcctacaag
cgcagcaagagacagacgctgagagaggcacgcatgaccgagaaactagagaagcagcag
aagatcgagcaggaaaggaagcgcagacagaaacaccaggagtatctcaacagcattctg
cagcatgctaaagatttcaaggaatatcacaggtccatctctggaaaaatccaaaagctg
tctaaagccatcgccacatggcacaccaacaccgagagagagcagaagaaggagacggaa
agaatcgagaaagagaggatgaggagactgatggctgaggatgaagaaggttacaggaag
ctaattgatcaaaagaaggacaagcgtctggcctaccttcttcaacagacagatgaatac
gtggccaacctgactgagcttgtgtatgagcacaaggctgctcaggctgccaaggagaaa
aagaggaagagaaagaagaaaaagaaggaagctggggatgctgaaggaatgggagccatc
gggcctgatggagagctcatagatgagaccagtcagatgagtgagctgccagtcaaagtc
attcagacagagacggggaaagtgctacaggggacagatgcccccaagtccagtcagtta
gaggcatggctcgagatgaaccctggatatgaagttgctccacggtcagacagtgaagag
agcggctcggaatttgaagaggaggatgatgaagatgtggtctccagagctgaatcagaa
gaaaagaaagtcattgatcccaacagtgatgaagtatctgaaactgcagccaagcacatc
atagagtctgctaaacaggatgtggatgatgagtacagtgttcaggcaggagagaccagc
tcccagtcttactatggagtggcccacgcggtcatagagagggtggagaaacagtccacc
ctactggtcaatgggactctcaaacattaccagatccagggtctggaatggatggtgtct
ttgtacaacaacaacctgaatggtattctggccgatgagatgggactggggaagaccatt
cagactattgcacttatcacttatctgatggagctcaagaggctcaacgggccgtacctc
atcatcgtacccctctcgactttgtctaactgggtttatgagttggacaagtgggcacca
agtattgtgaaaattgcctacaagggcacaccatcaatgcggaggtcttttgtgccgcag
ctccgcagtgggaagtttaatgtccttataaccacctacgagtacatcatcaaagacaag
cacattctcgccaagattcgctggaaatatatgattgtggatgagggccaccgcatgaag
aaccatcactgcaagctcacacaggtgttgaacacccactacgtcgctcccaggaggctg
ttactcactggaacccctctgcagaacaaactacccgagctctgggccctgctcaacttc
ctgttgcccaccatcttcaaaagctgcagcacctttgagcagtggttcaatgctccattt
gcaatgacaggagagagggtggatctgaatgaagaagagaccatccttatcattcgtcgc
ttgcataaggtgttacgtcctttccttctgcgcagactgaagaaagaggtggagtctcag
ttacctgagaaggttgagtatgtcatcaaatgtgacatgtcagccatccagaaggttctg
tacaggcacatgcagggcaaaggcatcctgctcactgacggctcggagaaagacaagaag
ggtaaaggaggagccaagaccttaatgaacaccataatgcagctgaagaagatctgtaac
catccctacatgttccagcacattgaggaatcttttgctgagcacttgggatatccaaat
ggcattatcaacggccctgacctgtaccgcgcctctggcaagtttgaattactggaccgc
atcctgcccaagctgaaggccaccaatcacagagtgcttctgttctgtcagatgaccacc
ctcatgaccatcatggaggattattttgcctatcgtaacttcctctatctgcgtctggat
ggatctacgaagtctgaggatcgtgcaatgcttttaaagaaattcaatgaagaaggctca
cagtatttcgtcttcctgctgagcaccagggcaggaggtcttggcctcaacttgcaagct
gcagacaccgttgtgatctttgacagcgactggaacccccaccaggacttgcaggcccag
gatcgagcccatcgtatcggccagcagaacgaagtacgcgtattgcgtctgtgtactgtg
aacagtgtggaggagaagattttagcggcggccaagtataaactgaacgttgatcagaaa
gtcattcaggcaggcatgtttgatcagaagtcgtccagtcatgagcgcagagccttcctg
caggctattctggagcacgaggaacagaatgaggaggaagatgaagttccagatgatgaa
accctcaatcaaatgattgctcgaaatgaggacgaatttgagtttttcatgcgcatggat
ttagaccgtcgtcgagaggatgcacgcaaccctaagcgtaaaccgcggctaatggaggag
gatgagttgccatcatggatcctgaaggatgatgctgaggtggagcggcttacctgtgaa
gaggaggaggaaaagattttcggccgtggatcccgtcaccgcagagatgtcgactacagc
gacacactgacagaaaagcagtggctgagggctatagaggatggcaacctggaggaaatc
gaagaggaaatacggctgaagaggcgcaagcgtaggagacacgtggacaaagacctgagg
cgtgaggaaggagacaaggccaagaaaagaagaggacgtcctccggcagagaagctttcc
ccaaacccacccaaactgacgaaacagatgaatgccatcgttgatactgtcatcaattac
agagatgcatcaggccgtcagctcagcgaagtctttgtgcagctgccctccaggaaagag
ctccctgaatactatgaactgataaggaagccagtggacttcaaaaagatcaaggagcgt
gtgcgcagccacaagtacaggagtgtgagcgatctggagaaagacgtcatgcttctttgt
cacaacgctcagacttataatctagagggctctcagatctatgaggactccattgttctt
cagtcagtattcaagagtgcaagacaaaagcttgctagtgaggaaagcgatgatgacagc
aatgatgatgatgatgatgatgatgaagatgacgacgaggaatcggaggaagaatctaag
tcagtgaaggtgaaaataaggctgagtaaacgggaagagagaagtcaggacaaaggcaag
aagagaccaagtcgtggaaaggccaagcccgtggtcagtgatgatgacagcgaggaagat
caggaggagaacttcaagaggaaaatgagcagtcagaggggagccacagcgacgatgagt
gaggaggagatgagctga
DBGET
integrated database retrieval system
