Carassius auratus (goldfish): 113079382
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Entry
113079382 CDS
T07313
Name
(RefSeq) usherin-like
KO
K19636
usherin
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
caua03037
]
113079382
Cilium and associated proteins [BR:
caua03037
]
Primary cilia and associated proteins
USH complex and associated proteins
113079382
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
Laminin_G_3
fn3
Pur_ac_phosph_N
EGF_LMN_ATRN
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
113079382
NCBI-ProteinID:
XP_026107420
UniProt:
A0A6P6NDX4
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MTIITYLRSLHQKETSPPTTNWLLGHKGAMLLLYTLGFYASLGLAAPQGNFPRLENIGAY
KSVSTMPTRATCGIPERSTFCQAGQVQEDLHTCFQKFCIQECPYSSSTLDYTDILATSAG
MCWKGDARDHRPGAKADSTSFIFPTSRGCPASPSTLSFGPASSFTLTMWLKLEQDTVMTL
LEKRAVGRLVLLVTVSKEDIQIHYGIHSKQNFSISMKTAGHISIGVWTHMSLQIHETSVS
LFLNGQEDDGTALDTQTLAGPIDDITSDGALWIGTSSNGTNQFIGRMQDFRFYPKTLTNR
EIEEVYTGQFPRLHTQSICRCPASHPRVHPLVERYCIPNAANDTTHNKILRLNQDAHPLH
YINDNDIGTTWISSIFSTLELLDKGITITIDLENGQYQVFYVILQFLNAQPEAVRIQRKT
TVSSEWKDWQFLAKNCSYFGMKDNGPLDRPDSVNCLQLPSNIPISRGNITFSILTPEPNL
RPGYNDFYNSVTLQEFVRATHVRIHLHGQYHTQDPAVPFRHRYYAVDEITISGRCECHGH
ADSCDTSVSPYRCACLPESHTHGANCESCSPLFNDKPFRAGDQVQAYNCRPCQCYGHASS
CHYNSSLDPHPEDHFRGGGGVCDNCTHHTTGRNCERCRSLFYREVGALLWAKDVCKPCEC
HSAGTVNGSLECEPIGGQCKCKRHVSGIQCNQCQHGFYKLQSALADGCHACNCNTAGTVQ
PDITCHQDSGQCQCKANVIGLTCDRCNYGFKFLNRTDPDGCIPCGCDPRGSLHQFCNPFT
GQCECKDGVRGLLCDTCIPHFYSLNGSGVCLPCDCSPNGSVPGTSCDAVTGQCRCKPNIE
GQRCDMCRDGYHTLDSSNSLGCVPCQCELRGTVNGSDVCDKTTGQCMCKNNVEGLRCNRC
SSHTYNLSSANTTHGCQPCHCDHMGTMPATVCNPVSGQCVCLPTRYSRDCGTCKPGFFLS
EAGLSECEVCECHSVGAVGQVCAAHSGQCVCAHASLTGRRCDQCQDLFFGFNTSVGRCEP
CGCDPVGGFNGTCHPETGQCLCKLYVTGDKCDICVEGASHMDPNNYLGCSKDPQQQPPPL
GQVLSSTAIDLTWRAPDSPNSNELMYTLLRNSEIIHISHSQHPFGTMHYTDADLSPYTTY
SYQLITSNIRANTSSATVSLRTLSGVPEQEELQISLVGRAKPTSASFNWTEPLNTTGPVE
SFTLSSIQDLTGEERIHYTGLQTEATAEELQPFTGYNFSLQACTNGGCARSENLIILTAQ
IPPQQQPAPAITTLGASQLQVDWEPPVLPNGIDTFFI
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcattacttatttaagatcactacatcagaaggaaacttcgccaccaacaacg
aattggctccttgggcacaaaggtgctatgttattactgtacaccctaggcttttatgcc
tcccttggcctggctgcccctcagggcaactttcccaggctcgagaacataggggcatat
aaatctgtcagcaccatgccaacgagggccacatgtggaattcccgagagaagtactttc
tgtcaagccggccaggttcaggaggatcttcacacctgtttccagaagttctgtatccag
gagtgtccgtacagctcctctacgctagactacaccgacatcctcgccacaagtgcgggc
atgtgctggaagggtgatgcacgggaccaccgtccaggcgcaaaggccgattccaccagc
ttcatctttccgacctcgagaggttgtccggcttccccgtcaactctaagtttcggccca
gcgagctcatttactctaacaatgtggctgaaactcgagcaagacactgtaatgacttta
ttggaaaagagggctgtgggcagactggtgctgctggtgacagtctccaaggaagacatt
caaattcactacggcattcacagcaaacaaaacttctctataagcatgaagactgcaggt
catatcagcataggcgtctggacacacatgtctctacagatacatgaaacaagcgtgagc
ttgttcctgaatggtcaagaggatgatggcacagctttagacacccaaaccttggcagga
ccaattgatgacatcacctcagatggtgctctgtggatcggtacaagttctaatgggaca
aatcaattcattggaaggatgcaggattttagattttatccaaagacgttaaccaataga
gagattgaagaagtctacactggacaattccctcgcctacacacacagtcgatatgccgc
tgccctgccagccaccccagagtgcaccccctcgtggagaggtactgcatccccaatgca
gccaatgataccacccataacaaaattctccgtctgaaccaggatgcccaccccctgcat
tacatcaatgacaatgacattggaaccacctggatctcctccatcttttccactttagag
ctgctggacaaaggaataaccatcaccatagacctggagaatggacagtaccaggttttc
tacgtgatactccagttcctcaatgctcagcctgaagcggtccgcattcaaaggaagaca
accgtgagttccgaatggaaggactggcaattcttggccaagaactgcagctactttgga
atgaaggataacgggcctttggatcgtcctgattctgtaaactgtctacagttgccaagc
aacatacctatctcccgtggaaatatcacctttagcatcctgacgcccgagccgaatctg
cgaccgggctacaatgacttctacaacagtgtcacccttcaggaatttgtgagagccacc
catgtgagaatccacctccatggccagtaccacacccaagatcctgcggttcctttccgt
catcgctactatgctgtggacgagatcaccatcagcggcaggtgtgagtgccatggccat
gcagacagctgtgacactagtgtgagtccgtaccgctgcgcctgcctcccagagagccac
acacatggagctaattgcgagagctgctctcctctcttcaatgacaagccgttcagagct
ggagatcaggtacaggcgtacaactgtcgcccatgccagtgctacggccacgcctcttcc
tgccactacaattccagcctggatcctcaccctgaagatcactttagaggaggaggaggg
gtgtgtgataactgtacacatcataccacaggcaggaactgtgagcggtgtcggagtctg
ttctacagggaggtgggtgcactcctgtgggccaaggacgtgtgcaaaccatgtgagtgc
cacagcgctgggaccgtcaatggcagtttagaatgtgagccaatcggggggcagtgtaag
tgcaagcgacatgtgtctggcatacagtgcaatcagtgccaacacggattctacaagctg
cagtcggcgctggctgatggctgccatgcctgtaactgcaataccgccgggaccgtgcag
ccagatattacctgtcaccaggactcaggtcaatgccagtgcaaggcaaacgtaatcggt
ctaacctgtgaccgttgtaactacggcttcaaattcctcaatcgcacagatcctgatggc
tgcattccctgtggttgtgacccacgaggttctctacaccagttctgcaatcctttcacc
ggccagtgtgagtgcaaagatggcgtacgaggcctcctctgtgacacctgcatccctcac
ttctacagtctgaatggtagtggagtctgcctgccctgcgactgcagtccaaacggatcc
gttcctggtacctcctgtgatgcggtaactggacagtgtaggtgcaaacctaacatagag
ggccaacggtgcgacatgtgccgggatggttaccacactctggacagcagcaactcgttg
ggctgtgtgccttgccagtgtgagctcagaggcacggtgaatggctcagatgtgtgtgac
aagaccacaggccaatgcatgtgcaaaaacaacgtggagggactacgttgtaatcgatgc
tcatctcacacttacaacctgagttctgccaacaccacgcatggatgtcaaccatgtcat
tgtgatcacatgggcaccatgcctgcaaccgtgtgcaaccctgttagcggtcaatgtgtc
tgcctgcccacacgctacagccgagactgtggaacctgtaaaccaggtttcttcctgtct
gaggcggggctcagcgagtgtgaagtgtgtgaatgtcactcggttggagcggtggggcag
gtgtgtgctgcccactcagggcagtgtgtgtgtgctcacgcatcactgaccggtcgcaga
tgtgatcagtgccaggatctcttctttggctttaatacaagtgttggcaggtgtgagcct
tgtggatgtgatcctgtcgggggattcaatggcacgtgccacccagagacggggcagtgt
ttgtgcaaactgtatgtgactggagataaatgtgacatctgtgtggagggagcgagtcac
atggatccaaacaactacctgggctgcagtaaagatccccaacagcagcctcctcctctt
ggccaggttctgagctccacggctatagatttgacctggagagcccctgactcccccaac
agtaatgaactgatgtacacactgcttcgaaactcagagatcatccacatcagccacagc
cagcacccatttggaactatgcattacacagatgctgatttgtctccttacacgacatat
tcttaccagctcatcacaagcaatatccgtgctaacaccagcagtgccacggtcagctta
cgcaccctgtctggtgtacctgagcaagaggaactccaaatatcccttgtgggtcgagcc
aagcccaccagcgcctcttttaactggacagagcctttgaacaccactggtccagtggag
agctttaccttgagctcgatacaggatctgaccggagaagagaggatccactacacagga
cttcaaacagaggctaccgctgaggagctgcaacctttcactggatacaacttcagtctg
caggcttgcactaacggaggctgcgctcgcagcgagaatctgatcatacttaccgctcaa
atacctcctcagcagcagcctgcacccgcaatcacaaccttaggggcctctcaactccaa
gtggactgggaaccgccagtgttacctaatggtattgacacatttttcatttaa
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