Carassius auratus (goldfish): 113080012
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Entry
113080012 CDS
T07313
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
caua03021
]
113080012
03036 Chromosome and associated proteins [BR:
caua03036
]
113080012
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
113080012
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
113080012
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
S1
Spt6_S1
S1_RRP5
HHH_9
HHH_3
SH2
Tex_N
MJ0788
Tex_YqgF
Motif
Other DBs
NCBI-GeneID:
113080012
NCBI-ProteinID:
XP_026108041
Ensembl:
ENSCARG00000061610
UniProt:
A0A6P6NIT7
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MSDFIESEAEESEEEFEEKDLKPKKTQKFMEEDEEEEEEENIEDQDEHGNLRGLIDDGDV
EEEEAQSGREDSDSGEEVRHRRRKRSYDDYLDDDDLDLIEENLGVKVKRRKKKYSRLKTM
DDEGEDDEKDMIADEIFTGDGDGDGEVEDGETVDTLHPRDDEEEEDDEESDIDDFIVDDD
DGQPITKKKGKKFPGYTNAALQEAQEIFGGHFDFAEFDTEAYDNAEEEEEDQDEESWDRP
KKQTKRRVGRRSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRAIPVKPAEDDELEE
EAEWIYRNAFSTPTISMQESTDYLDRGTTTNFSRKGPNTIAKIKEALNFMRNQHFEVPFI
AFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFQRMQSYQFEQISADPDKPL
ADSTRPLDTADMERLKDVQSLDELGDVYHHFLLYYGRDIPKMQNAVRASKKKLKKIKEVS
EEDGEEAEVEEEEEEDEHKGPDLKQASRRDMYSICQSAGLDGLAKKFGLTPEQFGENLRD
SYQRHETEQFPAEPLELSKDYVCSQFNSPEAVLEGARYMVAMQIAREPLVRHVLRQTFQE
RAKINIKPTKKGKKDVDEAHYAYSFKYLKNNKPVKELSGDQFLKMCLAEEEGLLAIDICI
DLVGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNKQRTLAIERSLQQFLYPQMAKELKN
KLVTEAKDNIIKSCCKKLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAFASGRD
TPVFCSLINGEGEVVDFLRLPYFLKRRNAWREDEREKKLQDIENLKKFLLSKKPHVVAVA
GENRDAHMVMEDIKRTISELEQDSSLPAVGVELVDNELAMLYMNGKKSEADFRDYPPLLR
QAVSVARKIQDPLVEFAQVCSSDENILCLKLHPLQEHVVKEELLGALYCEFINRVNEVGV
DVNRAIAHPYTQSLVQYICGLGLRKGYHLLKILKQNNTRLENRTQLVTMCHMGPKVFINC
AGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALEE
ILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRAPYRPSNIEEVFN
LLTKETPETFYIGKLITCVVTGIAHRXGESYDQAIRNDETGLWQCPFCQQDNFPELSEVW
NHFDSGSCPGQAIGVRTRLDNAVTGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKIDIE
KFNVDLTCRTSDLSDKNNEWKLPKDTYYDFDAEADDVKQEEEQKKKQQRTTYIKRVIAHP
SFHNINFKQAEKMMESMDQGDVVIRPSSKGENHLTVTWKVADGIYQHVDVREEGKENVFS
LGHTLWINTEEFEDLDEITARYIQPMAAFARDLLGHKYFQECNGGDRKKMEEILMRSKKE
KPTFIPYFVSACRDMPGKFLLGYQPRGKPRIEYVTITPDGFRYRSQMFPTVNGLFRWFKD
HYQDPVPGVTPTSSRTRTPASVNATPANINIANLTRAVNALPRNMTSQMFNAIAAVTGQG
QNPNTTPAQWASSQYGYSGGSSAGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPGQQQ
AMTTPQYPSSTPQSSHGHHQRSSSTPSSSSSRVRTPQPSETSSHTAVDWGKMAEQWLQEK
EAERRKQKTPRMTPRPSPSPMIESTPMSIAGDATPLLDETDR
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacttcatcgagagcgaggctgaggagtcagaagaggaattcgaggagaaagac
cttaagcccaagaagacacagaagtttatggaagaagatgaagaagaagaggaagaagag
aatattgaagatcaggatgagcatggaaaccttagaggactcattgatgatggtgacgtg
gaagaggaagaagcgcaaagtggtagagaggatagtgactccggtgaagaggtccgtcat
cgccgcaggaaacgaagttatgatgactatctggatgatgatgatctggacctcatcgag
gagaatttaggagtgaaagtgaagagaaggaaaaagaagtactcgcgtttgaaaaccatg
gatgatgaaggggaagatgatgagaaagacatgatcgctgatgagatcttcactggggat
ggtgatggagatggagaggtggaggatggagagactgtggacacacttcaccctagagat
gacgaagaggaggaagatgatgaggaatctgatattgatgatttcattgtggatgatgat
gatggacagcccatcacgaaaaagaaaggaaagaaattccctggctacactaatgctgct
ttgcaagaagctcaagagatattcggcggtcattttgactttgccgagtttgacactgag
gcgtatgataatgcagaagaggaagaagaggaccaggatgaagagtcatgggatcggcca
aagaagcagaccaagagaagagttggccgtcgtagcatatttgagatctatgagcccagc
gagctggagagcagccacatgaccgatcaagacaatgagatccgctccacagacatgcca
gaaagattccagttgagggccatccctgtaaagcctgctgaggatgatgagctggaggaa
gaagctgaatggatttacaggaatgccttctccacaccgaccatctccatgcaggagagc
acagactacctggatcgtgggacaaccaccaatttcagcagaaagggtcccaataccatt
gctaaaatcaaagaagcactgaacttcatgcggaaccaacactttgaggttcccttcatt
gcattctacagaaaggagtatgtggaaccagagctgaacattaatgacctgtggaaggtg
tggcagtgggatgagaagtggactcagctgaagaccagaaagcagaacctgacacgtctt
ttccagaggatgcagtcttatcagttcgagcagatctcagctgaccctgacaagccgctg
gcagactcgactcgtcccttagacactgctgatatggagaggctgaaagacgtccagtct
cttgatgagctgggagacgtctaccaccacttcctgctctactatggccgagacattccc
aagatgcagaatgcagtcagggccagcaaaaagaaactgaaaaagatcaaggaagtgtca
gaggaagatggggaagaggcagaagtggaggaagaagaggaagaagatgagcataagggt
ccagatctaaaacaagcttcccgtagagatatgtacagcatctgtcagagcgcaggcctt
gatggtcttgccaagaagtttggtctgacaccagagcagtttggagaaaacttgcgagac
agttatcagaggcacgaaacggagcagtttcctgccgagcctttggaactgtccaaggac
tacgtgtgcagtcaatttaacagcccggaggctgttctggaaggtgctcgttacatggtg
gccatgcagattgcccgtgaaccgctcgtcaggcatgtgctcagacagaccttccaggag
agggccaagattaacatcaagccaactaagaagggcaagaaggatgtggatgaagcgcac
tatgcctattccttcaagtatctcaagaacaacaagcctgtgaaagagctcagtggagat
cagttcttgaagatgtgcctggctgaggaggaaggcctgctcgccatagacatctgcatt
gaccttgtgggagtcaaagggtacgcaggagatcagacctactttgatgagattaagcag
ttctactacagggatgagttcagtcaccaggtgcaggagtggaacaagcagagaactctt
gccattgaacggtccttgcagcagttcctgtatcctcagatggccaaggaactgaaaaac
aagctcgtcactgaagccaaggacaatattattaagtcttgctgcaagaagctgtataac
tggttgaaggtggctccttatcggcctgatcagcaggtagaggaggacgatgaccttatg
gatgagtcgcaaggaaagggtatccgtgtactcggggtggcatttgcttccggcagagat
acaccagtgttctgctccctcattaatggtgaaggagaggttgtggacttcctcaggctt
ccttacttcctgaagaggaggaatgcatggagagaggatgaaagagagaagaagcttcaa
gatattgaaaacctcaagaaattcctccttagtaagaagccacatgttgtcgctgttgct
ggggagaatcgtgatgctcatatggtgatggaggacatcaagcgcaccatcagtgagctg
gagcaggactcctctctgcctgcggtgggggtggagctggtggacaacgaactggctatg
ctttatatgaatggcaagaagtctgaggcggacttcagggactatccacctctgcttcgg
caagctgtgtctgtggctcgtaagattcaagaccccctagtggagtttgcccaagtttgt
agcagcgatgagaacatcctgtgtttgaaactgcatcccctgcaggagcatgtagtgaaa
gaagagctgctgggcgctctttactgtgagttcataaaccgggtgaatgaggttggtgtg
gatgtgaaccgggccatagctcacccttacacccagagcctggtccagtacatctgtggc
cttggacttagaaaaggctatcacctgctcaagattcttaaacagaacaacactaggttg
gagaaccggacccagttggtcaccatgtgccatatgggacccaaagtctttattaactgt
gctggtttcatcaagattgacactgcctctcttggagacagcactgactcctacatcgag
gtcctggacggttctcgggtgcaccctgaaacatacgaatgggcacgtaaaatggcagtg
gatgctctagagtacgacgagtcagcggaagatgccaacccagccggagcactagaggag
attcttgagaacccagagaggctgaaggacctggatctggatgccttcgctgaggagctg
gagagacagggttatggtaataagggaattacactgtatgacattcgagcagagcttagc
tgtagatataaagatttgagagcgccgtacaggccttcaaacatagaggaggtctttaac
ctgctcaccaaagagacacctgagaccttctatattggtaaactgatcacctgtgtggtg
actggcatagctcacagannaggtgagagttacgaccaggccatccgtaatgatgagacg
ggactctggcagtgtccattttgccagcaggacaacttccctgagctcagtgaggtgtgg
aatcactttgacagcggctcctgccctgggcaagccatcggagtgagaactaggttagat
aacgctgtcacaggcttcatcccgacaaagtttcttagtgacaaggtggtgaagcaccct
gaagagagagtcaaagttggcatgaccgtgcactgccgcatcatgaagattgacatcgag
aagttcaacgtggatctcacttgtagaacgtctgacctgagtgacaagaacaatgaatgg
aagcttcccaaagatacctactatgattttgacgctgaggcagatgatgtgaaacaggaa
gaggagcaaaagaagaaacagcagagaaccacttacattaagcgagtgatcgctcacccg
tccttccacaacatcaacttcaaacaggcggagaagatgatggaatccatggaccagggt
gatgtggtgattcgacccagcagtaaaggggagaaccacctgacggtcacatggaaggtg
gctgatgggatatatcagcatgtggacgtgcgtgaggagggtaaagagaatgtgttcagc
ctcgggcatactctttggatcaacactgaggagtttgaggatctggatgaaatcacagcc
aggtatatccagcctatggctgcatttgcacgagatctgctcggccacaagtacttccag
gagtgcaatggaggtgataggaagaaaatggaggagattctcatgaggtccaaaaaagag
aagccgacattcatcccctacttcgtttcagcttgtagagacatgccaggcaaatttctg
ctgggttaccagccgagagggaagccaaggatagagtatgtaaccatcactccagatggc
tttaggtatcgctctcagatgttccctacagtcaatggtctcttccgctggttcaaagac
cactaccaggatcctgtgccgggagtcacaccgaccagcagcagaacaagaaccccagca
tcagtgaacgccacacctgccaacatcaacattgccaacttgactcgagccgtcaatgct
ctcccacgaaacatgacatcccagatgttcaacgccatagcggcggttacaggccagggc
cagaatcctaacacgacgccggcccagtgggcctccagtcagtatggttacagtggcggc
agcagtgcaggaggtggcggcagcagcagcgcttatcatgtgtttgcaacgccccagcag
ccaatggccacacccatgatgacgcccagctactcttacaccacacctgggcagcagcag
gccatgaccacgccccagtatcccagcagcaccccgcagtcctcacacggacaccaccag
cgttcgtcctccaccccatcatcctcgtcatcgagagtgcggacgccacagccaagtgag
acaagttcccacactgctgtggattgggggaaaatggctgaacagtggctgcaggagaaa
gaagccgagcggcgcaagcaaaagacgccccgcatgacgccccgaccttcacccagcccc
atgatcgagagcacacccatgtccatcgccggagacgccactcccctcttggacgagacg
gaccgatag
DBGET
integrated database retrieval system
