Carassius auratus (goldfish): 113080119
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Entry
113080119 CDS
T07313
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113080119
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113080119
04131 Membrane trafficking [BR:
caua04131
]
113080119
03036 Chromosome and associated proteins [BR:
caua03036
]
113080119
Enzymes [BR:
caua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113080119
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113080119
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113080119
Membrane trafficking [BR:
caua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113080119
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113080119
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113080119
NCBI-ProteinID:
XP_026108126
Ensembl:
ENSCARG00000057856
UniProt:
A0A6P6NJ15
LinkDB
All DBs
Position
Unknown
AA seq
1095 aa
AA seq
DB search
MDAVPGSKGSVRSPRGTSETKISLKDLCVLQRENINPNQKKNLQEARRKGRMDRSKEEEE
MSNELKNLDVRGKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSTVMEMLETEGLRGR
CVQVEARAVSEAELLLVHTKEYVELMKSTQNMTEEELKTLAHKYDSVYLHPEFFASACLA
VGSVLQLVDKVMTAQLRNGFSINRPPGHHAQADKMNGYCMFNNLAIAARYAQKQHGVKRV
LIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGPGQGYNINL
PWNKIGMEDGDYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDQKGEMRVSPQCFSILT
HMLKGVAQGRLVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGAPSESALKSISET
ISALYPFWKSLQTFEGGPLSDVTPRPAPVCAEVKVSSPVTGLVYDKRMMLHHNMWDGYHP
ELPKRISSIFCRHEELGLVSRCLQIPARLATEEELALCHSSKHISTIKSTEHMKPRDLDR
LGNDYNSIYICNDSYTCALMAAGSCFNSVQAIITGQVRNGVAIVRPPGHHAEKDTACGFC
FFNTAALTARYAQSITHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFP
GSEDANYDKVGLGKGTGYNVNIPWNGGKMGDPEYMAAFHHIVMPIAREFAPELVLVSAGF
DAARGDPLGGYQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGD
SPPSLDHLPPPKTNATVTINSVLRAHAPFWRSLRIQIPESLRLAVLFPKSKDKRASVGTS
KKSPRQSTPAQSPGQTPQHLEQSGLDELSKDLLSLNLNTSTSSNPSPASVPIGGARRKVK
PNPQRDSADLESDSPLKLTSEIASAGDGTHAEITAVKAETPDRTIPESVDDQESSVLEAA
GGHATMMSVLGSVCGAQATDLDTMYVVDPLTWCPHLESVRPVPAGGIDVFLPCEECGGDT
ENWICLFCYKVLCGRYVKQHMVTHGQVSGHPLVLSFADLSVWCYACESYVHNKVLHEAKS
AAHLVKFGEEIPPFS
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgttccaggttccaaaggttctgttcgatcaccgagaggaacatctgaaacc
aaaatctctctgaaagacctttgtgttctccagagagaaaacatcaatccgaaccagaag
aagaatcttcaggaggcgcggaggaagggcagaatggatcggagtaaagaagaggaagag
atgagcaatgaactcaaaaacttggatgttcgtggtaaaactaaagcaacaggaacaggt
ctcgtctacgtagatgcctttactcgctttcactgcctctgggatgccagtcacccggag
tgtccagccagagtgagcactgtgatggagatgctggagacggaaggtctgcggggacgc
tgcgtacaagtagaggccagagctgtgtcagaagctgagctgttactcgtacatacgaag
gagtatgtagagctgatgaagtccacacagaatatgacagaggaggagctgaagactctg
gctcataaatatgattctgtctacctgcatcctgagtttttcgcctctgcctgtctggcg
gtgggatcagttctccagctggtggataaagtgatgacagcacagctgcgtaatggcttc
tccatcaacaggcctcctggtcaccacgctcaagcagataagatgaatggctactgcatg
tttaataatctggccatagcagcgcgctacgcacagaagcagcatggagttaaacgagtt
ctgattgtggattgggatgtgcatcacggacagggaatccagtatatttttgaagaggat
cccagtgtgctgtatttctcagtgcacagatatgaagacggctccttctggccacatctg
aaggagtctgacagcagttcggtgggttcaggaccaggacagggctacaatatcaacctg
ccctggaacaagatagggatggaggatggagattacgtcacagctttccagcagctcctg
cttccggtggcgtatgagtttcagcctcagctggtgttagtggcggccggctttgactct
gtgatcggtgaccaaaagggtgagatgcgagtgagtccacagtgtttctccatcctgacc
cacatgctgaaaggtgtagcacagggtcgactcgtgctggctcttgagggtggatataac
ctccagtccacagcagagggtgtttgtgctagtgtgaggtcactgctgggtgacccttgc
cctcacctgacctctcccggcgctccgagtgaaagtgccctgaagtccatctcagagacc
atctcagccttgtatccattttggaagagtcttcaaacttttgagggcggtcctctctct
gatgtcactccccggcccgctccagtgtgtgcagaagtgaaggtttcctctccggtcact
ggactggtttacgacaagagaatgatgcttcatcacaacatgtgggacggttatcatccg
gagctccctaagagaatttctagcatcttttgccggcatgaggagttgggcctggtgtcc
cgttgccttcagataccagctcgtctagcaacagaagaagagctggcactctgtcacagt
tctaagcatataagcactataaagagtacagagcacatgaaacccagagatctggaccga
ctgggaaacgattacaactctatctacatctgtaatgatagctacacctgcgccctgatg
gccgctgggtcgtgctttaactctgtacaggccataatcacaggccaggtgagaaatggc
gtggctatagtccgtcctccgggtcatcacgcagagaaagacacggcttgtggtttctgt
ttctttaatacggctgctttgaccgctcgctatgcccagagcatcactcacgaatccctg
cgtgtcctcatcctcgattgggacgttcaccatggaaacggcacgcagcacatctttgag
gaggatgacagtgttctgtacatctccctgcatcgctatgaggacgggacattcttcccc
ggttcagaggatgctaactatgataaggtggggctggggaagggcacaggatacaatgtt
aacatcccctggaatgggggaaagatgggagacccagaatacatggcggctttccatcac
atagtgatgccgatagccagagagtttgccccagagctggtgctggtgtctgctggcttc
gatgcagcacgaggtgatccgttaggagggtatcaggtgaccccagagggctacgctcac
ctcacccatcagttaatgagtctggctgcaggaagagtgctagtcatactagagggggga
tataacctcacctccatctctgagtcaatgtccatgtgcaccagtatgttgctgggagac
tctcctccgtctctagaccatctgccccctccgaagaccaacgccactgttaccattaac
agtgtcttgcgcgcacacgcccccttttggagatccttgagaatacagattccagagtca
cttcgtttggctgtgctgtttcctaaatcaaaagacaagcgggcatcggtgggcacgagc
aagaaatctcctcgccagtccacccctgcccagagtcctggacagacaccgcagcatctc
gagcagtctggccttgatgagctcagtaaggacctgctctctctgaatctcaacacaagt
acctcatctaaccccagcccagcatctgtccccattggaggagccagacggaaggtgaaa
cccaacccacagagggattcagcagacctggagtcagattcacccctaaaactcacatca
gagatagccagtgccggagatggcacgcatgcagagattacagctgtaaaagctgagaca
cctgaccggacaatcccagaatccgtggatgaccaggagagttcagtgctggaagccgct
ggtggtcacgccactatgatgtcagtcttaggaagtgtctgcggagcacaagccacagat
ttggacaccatgtatgtggtggacccgctgacatggtgcccacacttggagtcagtgcga
ccggtgcctgcaggtggcatcgatgtcttcctgccgtgtgaagagtgtggaggcgataca
gaaaactggatctgtctcttctgctacaaggtgctctgtgggcgttatgtgaagcagcac
atggtgacccacgggcaggtgtcgggtcacccattggtgctgagcttcgctgacctttct
gtctggtgctacgcttgtgagtcatacgtccacaacaaggtgctccatgaagccaaaagt
gccgctcaccttgtgaagtttggagaggagattcctcctttcagctaa
DBGET
integrated database retrieval system
