Carassius auratus (goldfish): 113080425
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Entry
113080425 CDS
T07313
Name
(RefSeq) pinin-like
KO
K13114
pinin
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03013
Nucleocytoplasmic transport
caua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113080425
03015 mRNA surveillance pathway
113080425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113080425
03041 Spliceosome [BR:
caua03041
]
113080425
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113080425
Spliceosome [BR:
caua03041
]
Complex C
Other components
EJC/TREX
113080425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
113080425
NCBI-ProteinID:
XP_026108386
Ensembl:
ENSCARG00000064514
UniProt:
A0A6P6NJS8
LinkDB
All DBs
Position
Unknown
AA seq
664 aa
AA seq
DB search
MAVAVRSLQDQLEKAKESLKSVDENIRKLTGRDPSELRPGQIRRNTIAGPGGGRGRGINL
LRRGLSDSGGGPPAKQRDIAGALLRLAGDERARRDSRHDSDAEDDDDVKKPALQSSVVAT
SKERTRRDLIQDQTIDERGKQRNRRMFGLLMGTLQKFKQESTVSTDRLKRRQEIEQKLEV
QAEQERKKVESERRELFEERRAKQTELRLLEHKVELAQLQEEWNAHNSKLIKFIRTKTKP
PIFYLPGRMCSATQKLLEESQKKLNGVFDERREAFAEQLNKMEARPRRQSQRTGDREMED
SRRAEETKKEDQEEGKAGLGRTGNRHDVEMEDEEEDVVEEEGEESSEIREREGDQEQEQS
EKDKHEESEQKAEEEDEDEEDVGTSEAKEEGEEQMEVTEVVREDEAQGKLQVESPEATVE
EVGNVQKEEEQETENETQEEVVTDSQQAPESQMEIHPEEGKEPQLDVPAPSVTEHDPKQV
DTVPETQQRPLEPDPEIPQEQSQEPSVQPQEAKADPKEASKETDEARGRAKVSAKRSKSR
SSSSSSSSSSSSSSSSGSSSSSSGSSSSSSGSSSSSSSSRSRSHGRDRDGRDHKRRRRPS
DRERGKSGSERGHKSSKGSGRESKGSKDKNPKPDKKRMSSEGSRSGRRSSRSERDRKSDR
KDRR
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgcgaagcttgcaagaccagctggaaaaagccaaggaaagcttaaag
agcgtggacgaaaatattcgaaaactaaccggcagagatccaagcgagttaagaccgggt
cagattaggagaaataccatcgcaggcccaggtggaggtagggggcgtggaatcaatttg
ctgaggcgtggactctcagatagtggtggaggacccccagccaaacagagagacatcgca
ggggcactcttgaggctggcaggggatgagcgagcaaggagagattcacgccatgacagc
gacgctgaggacgatgacgatgtcaaaaaaccagcgttgcagtcatctgtggttgctacc
tccaaagaacgtacgcgccgagatcttattcaggatcagaccattgatgagagaggaaag
cagagaaaccggcgcatgtttggcctattgatgggaacattgcaaaagtttaagcaggaa
tctactgtgtccacagaccggttaaaaagacgccaagaaattgagcagaaattggaagtg
caggcagaacaggagcgtaaaaaagttgagagtgaaaggagagagctctttgaagaaaga
cgtgccaaacaaacagagctgcggcttctggagcacaaagtggagctcgctcaactgcaa
gaagagtggaatgcacataattcaaagctcatcaagttcattcgcacgaagaccaagccc
ccgatcttctacctgccggggcgaatgtgctccgctactcaaaagctcctggaagagtct
cagaaaaaattaaatggtgtgtttgatgagagacgtgaagcctttgcagagcaactcaac
aaaatggaggctcggccaaggcgtcagtcccagaggacaggtgacagagaaatggaggat
agccgtcgggctgaagagacgaagaaagaagatcaagaggagggtaaggctggattaggg
cggacaggtaacaggcatgatgtggaaatggaggacgaggaggaagatgtagtcgaggag
gaaggagaggagagctcagagattagggagagggagggggatcaagagcaggagcagagt
gagaaggataaacatgaggagagtgagcagaaggcagaggaggaagatgaggacgaggag
gatgtaggaacaagtgaggctaaggaagagggggaagagcagatggaggttacagaagtt
gtgagggaagatgaggcacagggtaagttgcaggttgagagtccagaagccacagttgaa
gaggtaggtaatgtgcaaaaggaggaagagcaggagacagagaacgagactcaggaggaa
gttgtaacagactcgcagcaagcccccgaaagccagatggaaatacatcctgaagagggt
aaagagcctcaactggacgtcccggcccctagtgtgacggaacatgaccccaaacaagtt
gacacggtgcctgagacccaacagagaccacttgaacctgacccagaaatccctcaagag
caaagccaagaaccatcagtccaaccacaagaagccaaagcagacccaaaggaagctagc
aaggagaccgatgaggctcgtggacgggccaaagtcagtgccaagaggagcaagagccga
agtagcagcagttcttcttccagttcttcttcaagctcctcctccagtggctccagctcc
tcttccagtggctccagtagcagttcttctggctcttcctcatcgtcttccagttcacgc
tcccgtagtcacggcagggatagagacggccgagaccacaaacgccgccggagaccatca
gacagggagcgtggaaagagcggcagcgagagaggacacaagtcctcaaaaggtagtgga
cgagaaagcaagggctccaaagacaagaaccccaaacctgacaagaaaaggatgagttcg
gaaggaagcaggtcagggaggaggtcctccagaagcgagagggatcggaagtctgatcgg
aaggatcgacgttga
DBGET
integrated database retrieval system