Carassius auratus (goldfish): 113080458
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Entry
113080458 CDS
T07313
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04145
Phagosome
caua04510
Focal adhesion
caua04512
ECM-receptor interaction
caua04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
113080458
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
113080458
09144 Cellular community - eukaryotes
04510 Focal adhesion
113080458
09142 Cell motility
04820 Cytoskeleton in muscle cells
113080458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
caua04131
]
113080458
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
caua04147
]
113080458
00536 Glycosaminoglycan binding proteins [BR:
caua00536
]
113080458
Membrane trafficking [BR:
caua04131
]
Endocytosis
Phagocytosis
Opsonins
113080458
Exosome [BR:
caua04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
113080458
Exosomal proteins of colorectal cancer cells
113080458
Exosomal proteins of bladder cancer cells
113080458
Glycosaminoglycan binding proteins [BR:
caua00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
113080458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF
cEGF
DUF7630
Mis14
Motif
Other DBs
NCBI-GeneID:
113080458
NCBI-ProteinID:
XP_026108419
Ensembl:
ENSCARG00000020746
UniProt:
A0A6P6NIX9
LinkDB
All DBs
Position
5:20588609..20598910
Genome browser
AA seq
945 aa
AA seq
DB search
MGAWTRILFSLQLLLQLFDTVKTQGFVYDLLASSDCLPDLLQGGIKAKNMDNVFILASLQ
LQNKAPTRIFRIFNALDNTDYFDFTVQGKLNKVILKYLKSNGKVGTTNFGKVPLTDGQQH
HILLHFSGLQQGTPTTALYVDCRLVERVQDVPLAFKSLPQGPKRVTLKTLPSSSQDMLSD
LRLVLDESIENVVELQDCSGPEQSEQRETLQLLGTTSKMEAGPMFELMRMIQELKQKVDQ
QTKETADLRKTIMECVQCTGREKPGLPDQKQSKCRPGVCFKLDMCIETAEGVECAPCPEG
YTGDGVQCEDIDECQISPCFSGVRCVNTAPGFRCEKCPRGFTGPEIQGVGVHYAQTNKQM
CNDIDECQVDNGGCTPNSYCHNTVGAFHCGICKTGFTGDQNSGCRSTGLDPAPLTQGLCG
NGQPNPCDVNAECVVERDGSISCSCKVGWAGNGYVCGKDTDIDAYPDIKLQCRDGTCKKD
NCMFVPNSGQEDADRDGKGDACDEDADSDGIVNDQDNCWLVPNIDQKNSDKDLHGDACDN
CINVENPDQRDTDRDGLGDACDDDIDGDGLKNILDNCQRVPNPEQKDKDNDGVGDECDSC
PEVPNPNQSDVDDDLVGDTCDTNIDSDGDGHQNTKDNCPTIINSSQLDTDKDGLGDECDD
DDDNDGILDDQDNCRLVPNPDQKDENNDGVGDACTGDFDKDHVIDRIDTCPENAEITLTD
FRAYQTVVLDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNT
VTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAEPGIQLKAVKSKTGPGEFL
RNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWNLKHRPQVGYIRVKFYEGTDLVADSG
VVTDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYTEQAQK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcttggacaagaatcctattcagtttacagttacttttacaactatttgataca
gtgaaaactcaaggatttgtttatgatcttctggcatcatcggattgcttacctgacctt
ctgcaaggaggaataaaagcaaagaacatggacaatgtttttatccttgcaagcctgcag
ctgcagaacaaagctccgacgcgcatcttccgcatcttcaatgctttagacaacacagat
tattttgatttcaccgttcagggaaaactcaacaaagtcattttgaaatatctaaaaagc
aacggaaaggttggaacaaccaatttcggtaaagtgccactgacagatggtcaacagcac
cacatactgctccacttcagcgggctgcagcagggcacccccaccacggccctctatgtg
gactgcaggctggtggagagggtgcaggacgtcccgctggccttcaaatcactgccgcag
ggcccaaaacgagttacactcaagaccctgccaagctcatcccaggatatgctgtcagac
ctcagacttgtgcttgatgagtctatcgaaaatgtggtcgagcttcaggactgcagtggt
ccagagcagagcgaacagagggaaacactgcaactactaggaacaacttcaaaaatggaa
gctggcccaatgtttgagctcatgcgaatgatccaagagttgaaacagaaggtcgatcag
cagaccaaagaaaccgctgacctgagaaagactatcatggagtgtgttcaatgcactgga
cgggagaaaccaggactaccggatcaaaagcaatccaagtgcaggccaggggtctgtttt
aagctggacatgtgtatcgaaaccgctgaaggagtggaatgtgcaccctgtcccgagggc
tacactggagacggagtccaatgtgaagacatagatgagtgtcagatcagcccatgtttc
tctggtgtacggtgtgttaacactgcgccagggttcagatgtgagaagtgtccacgaggc
ttcacaggcccagagatccagggtgtgggtgttcactatgcccagacaaacaaacaaatg
tgtaatgatattgacgagtgccaggtggataatggtggctgcacacccaattcatactgc
cataacacagtgggtgcgtttcactgtgggatctgcaaaactggattcacgggtgaccag
aatagcggctgcagaagtactggcctggatcccgctcctctgactcaagggctgtgtggg
aacggccagccaaatccatgtgacgtcaacgcagagtgtgttgtggagagagatgggagc
atcagttgttcgtgcaaagttggctgggcaggaaacggctatgtctgtggaaaggacaca
gacattgatgcttatccagatatcaaacttcagtgcagagatggaacctgcaagaaggat
aactgcatgttcgttccaaactcaggccaagaagacgcagacagagatgggaagggagat
gcctgtgatgaggacgcagacagtgatggcatcgtcaacgatcaggacaactgctggctg
gttcctaacatagaccagaagaacagtgataaagatctccacggtgatgcttgtgataat
tgcataaacgtggagaacccggaccagcgggacacagacagggacggactgggggatgcc
tgtgatgatgacatagatggggatggtttgaagaacatcctggataactgtcagagagtt
cccaaccctgagcagaaggacaaagataatgacggtgttggtgatgaatgtgacagctgt
cctgaggtgccaaaccccaaccagtctgatgttgatgatgatcttgttggagacacttgt
gacacaaacattgacagtgatggagacggtcatcagaacaccaaagacaactgccccacc
atcattaatagctcacagctggacacggataaggacggccttggagacgagtgtgatgat
gacgatgataatgatggcatcttggatgatcaagataactgtagactggtgccaaacccc
gaccaaaaagatgaaaacaatgatggggtgggtgacgcctgcactggagactttgacaaa
gatcatgtgatagaccgaatcgacacctgccccgagaacgcagagatcactctgaccgac
ttcagagcctatcagaccgtggttctggatccagagggagaggctcagatcgaccccaac
tgggttgttcttaatcagggaatggagatcgtccaaaccatgaacagtgacccaggacta
gctgttggatatacagcattcagtggcgtggactttgagggcaccttccatgtgaataca
gtgacggatgacgactacgcaggcttcatcttcggctaccaggattcctccagcttctat
gtggtgatgtggaagcagacggagcagacgtactggcaggcggtgccctttagagccgtg
gccgagccaggcattcagcttaaggctgtgaagtctaaaaccgggcctggggagttcctg
aggaattcactgtggcacactggagacacaaacgatcaggtgcgcttgctgtggaaagac
cctcgtaatgtgggctggaaggacaaggtgtcctaccgctggaatctgaagcacagaccc
caagtgggatacatcagagtaaagttctatgaaggcaccgacctggttgcggactctgga
gttgttactgacactagtatgagaggaggccgtcttggggtgttctgcttttcacaggaa
aacatcatctggtccaacctgagatatcgctgtaatgacacaattcctgaagactataca
gaacaagcccagaagtaa
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