Carassius auratus (goldfish): 113081328
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Entry
113081328 CDS
T07313
Name
(RefSeq) histone deacetylase 6-like isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113081328
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113081328
04131 Membrane trafficking [BR:
caua04131
]
113081328
03036 Chromosome and associated proteins [BR:
caua03036
]
113081328
Enzymes [BR:
caua01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
113081328
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113081328
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
113081328
Membrane trafficking [BR:
caua04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
113081328
Chromosome and associated proteins [BR:
caua03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
113081328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
113081328
NCBI-ProteinID:
XP_026109203
Ensembl:
ENSCARG00000063910
UniProt:
A0A6P6NKS9
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MDRSKEEEEMSNELRNMDVRGKTKATGTGLVYVDAFTRFHCLWDASHPECPARVSTVMEM
LETEGLRGRCMQVEARAVSEAELLLVHTKEYVELMKSTQNMTEEELKTLAHKYDSVYLHP
EFFASACLAVGSVLQLVDKVMTAQLRNGFSINRPPGHHAQADKMNGYCMFNNLAIAARYA
QKQHGVKRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRYEDSSFWPHLKESDSSSVGSG
PGQGYNINLPWNKIGMEDGDYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDQKGEMRV
SPQCFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLTSPGAPSE
SALKSISETISALYPFWKSLQTFEGGPLSDVTPRPTPVCAEVKVSSPVTGLVYDKRMMLH
HNMWDRCHPELPKRISRIFCRHEELGLVSRCLQIPARLATEEELALCHSSKHISTIKSTE
HMKPRDLDRLGNDYNSIYICNDSYTCALMAAGSCFNSVQAIITGQVRNGVAIVRPPGHHA
EKDTACGFCFFNTAALTARYAQSITHESLRVLILDWDVHHGNGTQHIFEEDDSVLYISLH
RYEDGSFFPGSEDANYDKVGLGKGTGYNVNIPWNGGKMGDPEYMAAFHHIVMPIAREFAP
ELVLVSAGFDAARGDPLGGYQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLTSISESMS
MCTSMLLGDSPPSLDHLPPLKTSATVTINNVLRAHAPFWRSLRIQIPESLRLAVLFPKSK
DKRASVGTSKKSPRQSTPAQSPGQTPQHLEQSGLDELSKDLLSLNLNTSTSSNPSPASVP
IGGARRKVKPNPQRDSADRESDSPLKLTSEKARAGDGTHAEITAVKPETPDRTIPESVDD
QESSVLEAAGGHATMMSVLGSACRAQATDLDTMYVVDPLTWCPHLESVRPVPAGGIDVFL
PCEECGGDTENWICLFCYKVLCGRYVKQHMVTHGQVSGHPMVLSFADLSVWCYACESYVH
NKVLHEAKSAAHLVKFGEEIPPFS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggatcggagtaaagaagaggaagagatgagcaatgaactcagaaatatggatgttcgt
ggtaaaactaaagcaacaggaacaggtctggtctatgtagatgcctttactcgctttcac
tgcctctgggatgccagtcacccggagtgtccagccagagtgagcactgtgatggagatg
ctggagacggaaggtctgcggggacgctgcatgcaagtagaggccagagctgtgtcagaa
gctgagctgttactcgtacatacgaaggagtatgtagagctgatgaagtctacacagaat
atgacagaggaggagctgaagactctggctcataaatatgattctgtctacctgcatcct
gagttttttgcctctgcctgtctggcggtgggatcagttctccagctggtggataaagtg
atgacagcacagctgcgtaatggcttctccatcaacaggcctcctggtcaccacgctcaa
gcagataagatgaatggctactgcatgtttaataatctggccatagcagcgcgttacgca
cagaagcagcatggagttaaacgagttctgattgtggattgggatgtgcatcacggacag
ggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacagatat
gaagacagctccttctggccacatctcaaggagtctgacagcagttcggtgggttcagga
cctggacagggctacaatatcaacctgccctggaacaagatagggatggaggatggagat
tacgtcacagctttccagcagctcctgcttccggtggcgtatgagtttcagcctcagctg
gtgttagtggcggccggctttgactctgtgatcggtgaccaaaagggtgagatgcgagtg
agtccacagtgtttctccatcctgacccacatgctgaaaggtgtagcacagggtcgactc
gtgctggctcttgagggtggatacaacctccagtccacagcagagggtgtttgtgctagt
gtgaggtcactgctgggtgacccttgccctcacctgacctctcccggcgctccgagtgaa
agtgccctaaagtccatctcagagaccatctcagccttgtatccattttggaagagtctt
caaacttttgagggtggtcctctctctgatgtcactccccggcccactccagtgtgtgca
gaagtgaaggtttcctctccggtcactggactggtttacgacaagagaatgatgcttcat
cacaacatgtgggaccgttgtcatccggagctccctaagagaatttctcgcatcttttgc
cggcatgaggagttgggcctggtgtcccgttgccttcagataccagctcgtctagcaaca
gaagaagagctggcactctgtcacagttctaaacatataagcactataaagagtacagag
cacatgaaacccagagatctggaccgtctgggaaacgattacaactctatctacatctgt
aatgatagctacacctgcgccctgatggccgctgggtcgtgctttaactctgtacaggcc
ataatcacaggccaggtgagaaatggcgtggctatagtccgtcctccgggtcatcacgca
gagaaagacacggcttgtggtttctgtttctttaatacggctgctttgaccgctcgctat
gcccagagcatcactcacgaatccctgcgtgtcctcatcctcgattgggacgttcaccat
ggaaacggcacgcagcacatctttgaggaggatgacagtgttctgtacatctccctgcat
cgctatgaggacgggtcattcttccccggttcagaggatgctaactatgataaggtgggg
ctggggaagggcacaggatacaatgttaacatcccctggaatgggggaaagatgggagac
ccagaatacatggcagctttccatcacatagtgatgccgatagccagagagtttgcccca
gagctggtgctggtgtctgctgggttcgatgcagcacgaggcgatccgttaggagggtat
caggtgaccccagagggctacgctcacctcacccatcagttaatgagtctggctgcagga
agagtgctaatcatactagaggggggatataacctcacctccatctctgagtcaatgtcc
atgtgcaccagtatgttgctgggagactctcctccgtctctagaccatctgccccctctg
aagaccagcgccactgttaccattaacaatgtcttgcgcgcacacgcccccttttggaga
tccttgagaatacagattccagagtcacttcgtttggctgtgctgtttcctaaatcaaaa
gacaagagggcatcggtgggcacgagcaagaaatctcctcgccagtccacccctgcccag
agtcctggacagacaccgcagcacctcgagcagtctggccttgatgagctcagtaaggac
ctgctctctctgaatctcaacacaagtacctcatctaaccccagcccagcgtctgtcccc
attggaggagccagacggaaggtgaaacccaacccacagagggattcagcagaccgggag
tcagattcacccctaaaactcacatcagagaaagccagagctggagatggcacgcatgca
gagattacagctgtaaaacctgagacacctgaccggacaatcccagaatccgtggatgac
caggagagttcagtgctggaagccgctggtggccacgccactatgatgtcagtcttagga
agtgcctgcagagcacaagccacagatttggacaccatgtatgtggtggacccgctgaca
tggtgcccacacttggagtcagtgcgaccggtgcctgcaggtggcatcgatgtcttcctg
ccgtgtgaagagtgtggaggcgatacagaaaactggatctgtctcttctgctacaaggtg
ctctgtgggcgttatgtgaagcagcacatggtgacccacgggcaggtgtcgggtcaccca
atggtgctgagcttcgctgacctttctgtctggtgctacgcttgtgagtcatacgtccac
aacaaggtgctccatgaagccaaaagtgccgctcaccttgtgaagtttggagaggagatt
cctcctttcagctaa
DBGET
integrated database retrieval system
