KEGG   Carassius auratus (goldfish): 113083922
Entry
113083922         CDS       T07313                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    113083922
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:caua03400]
    113083922
DNA repair and recombination proteins [BR:caua03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     113083922
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_DCAF12 ANAPC4_WD40 WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WD_LRWD1 Beta-prop_Vps41 WDR54 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 RAWUL Nucleoporin_N WD40_like Tfb2_C
Other DBs
NCBI-GeneID: 113083922
NCBI-ProteinID: XP_026110531
Ensembl: ENSCARG00000038267
UniProt: A0A6P6NQD1
LinkDB
Position
Unknown
AA seq 677 aa
MATHHRQNAAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSIN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKSLLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQANEAFTHVYSGGRDRKIYCTDLRSPDIRVLICEENAPVLKM
ELDRSADPHSAIWVSTTKSTVNKWSLKGIHNFRASGDYDNDCSAPLTPLCTQTEQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKTEFDEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PSDDESELNHGSVNGELESRMQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDSESQTGASSAEKPSEQKEEEDMAVLAEEKIELLCQDQVLDPNMDLRTVKHF
IWKSGGDLTLHYRQKST
NT seq 2034 nt   +upstreamnt  +downstreamnt
atggcgacgcatcacaggcagaatgcagcggggcgcaggaaagtgcaggtgtcatacgtg
atcagagacgaggtggagaaatataatcgtaatggagtcaacgcactacagctggatcca
gcacttaaccggctcttcaccgccggacgagactctatcatcaggatatggagcattaac
cagcacaagcaggatccctacattgcatcgatggagcatcacacagactgggtcaatgac
atcgtcctctgctgcaacggcaaaacactgatctcagcgtcatcagacactacggtgaag
gtctggaacgcacacaagggcttctgcatgtctacactgcgaacgcataaggactatgtt
aaagcattggcatatgctaaagacaaagagctggtggcttctgcaggactggaccgacag
atctttctctgggatgtgaacacgctgaccgcgctgaccgcatccaataacaccgttact
acgtcttctctgagcggaaacaaggactcgatctacagtctggccatgaatcagatgggg
acggttatagtgtcaggatccaccgaaaaggttctgagagtctgggacccgcgaacctgt
gccaaactaatgaaactgaaaggacacacggacaacgttaaatcactgttactcaacaga
gacgggactcagtgtctctcggggagctcagacgggacgatccggctctggtctctgggt
cagcagcggtgcatcgccacgtaccgtgttcacgacgagggcgtctgggcgctgcaggcc
aacgaggccttcacacacgtgtactccggaggccgtgaccgtaagatatactgtactgac
ctgcgcagtcctgacatccgtgtgctgatctgtgaggagaacgctcccgtgctgaagatg
gagctggacaggtccgctgatccgcattcagccatctgggtttccaccaccaagtccacg
gttaataagtggtctctgaagggtatccataatttccgagcgtctggtgattatgataac
gactgcagcgctcctctgacgccgctgtgcacgcagacagaacaagtgatcaaaggtggc
gccagtataattcagtgccacattctgaacgacaagcgacacattctgaccaaagacacc
aacaataacgtggcgtactgggatgtgctgaaggcctgtaaagtggaagacctgggcaag
acagagtttgatgaagagatcaagaaaaggttcaagatggtttatgtgccgaactggttc
tcggtggatctgaagacagggatgctgaccataacgctggacgagagcgactgctttgca
gcctgggtttctgctaaagacgctggcttctccagcccggacggatccgaccccaaactg
aatctgggaggactgctgctgcaggcgctgctggagtattggcctcgcactcacattaac
ccttcggacgacgagagcgaactcaatcatgggagcgtgaacggcgagctcgagagccgg
atgcagaaaggaaacggatatttccaggtgcctccacacactccggtgatcttcggtgaa
gcgggaggacggacgttgttcaggctgctgtgtcgagactccggaggagaaaccgagtcc
atgttactgaacgagacggtcccgcagtgggtcatcgacatcaccgtggacaaaaacatg
cctaaattcaacaaaatcccattctacctccagccccattcatcgtccggagcgaagacg
ttaaagaaggatcgtctgtcggccagtgacatgttacaggtgaggaaggtgatggagcac
gtgtatgaaaagatcatcaacctggacagcgagtctcagacgggcgcttcgtctgcagag
aagcccagcgaacagaaggaggaggaggacatggcagtgctagcggaggagaagatcgag
ctgctctgtcaagatcaggttctggatcccaacatggatctgcggacggtgaagcatttc
atctggaagagcggcggcgatctgacgctccattatcggcagaaatccacgtga

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