Carassius auratus (goldfish): 113084049
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Entry
113084049 CDS
T07313
Name
(RefSeq) WD repeat-containing protein 36-like
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113084049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
caua03009
]
113084049
Ribosome biogenesis [BR:
caua03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
113084049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_WDR75_1st
Beta-prop_VPS8
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_EIPR1
Utp12
Beta-prop_LRRK2
Cytochrom_D1
SGL
Zn_Ribbon_Topo
Motif
Other DBs
NCBI-GeneID:
113084049
NCBI-ProteinID:
XP_026110550
Ensembl:
ENSCARG00000030494
UniProt:
A0A6P6NNB0
LinkDB
All DBs
Position
5:complement(26066103..26080855)
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AA seq
896 aa
AA seq
DB search
MSDMSAGKKGSVIFSGFRALGLYSNHLAHVLRFHQKHREFYVLTAVGQCFHTYNVKKLGI
VAVSNALPEDISSLAADRMLVYAAYGKLISAFAKNKEVVHTYTGHQADVHLLLPFGDHLI
SVDKDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNVKS
NKLLFTFPGWASAVTVLQQTPAVDVVGVGLASGQIIVHNIRFDETLMKFQQDWGPVTALS
FRTDGHPIMASGSPIGHIGLWDLEEKKFVSQMRDAHTTAIAGLTFLQNEPLLITNGADNA
IRVWIFDVAGGDGRLLRQRTGHSAPPTKIRHHDQSSLNILSAGQDGTLQSFSTVHERFNK
SLGHGTLNKTRAKKKGLTNDTAKLPAITRFAAETSRQSDWDGIIACHRGFLVTTTWNYQK
GSIGAHKLEPERFNKNRSLNVHATAVDITSCGNFAVIALSSGHIDVYNMQSGFHRGHYGE
DKAHAGAVRGVSVDALNQLTVSVGADRLLKIWRFRSKELLHTHSLPAAPASSLLHRESGM
LAIALDDFTIYILDMETRRTVRRFSGHRGQINDMTFSPDGRWLITASMDCTIRTWDLPSG
SLVDCFLVDAAAVSLSMSPTGNFLASSHVDGLGIYLWSNNTLCSMVSLRPLPADYEPTVI
MLPGTCPSRDTEEEDILDADSSEMDEYISPAQLDEHLITLSLLPDSRWKNLLHLDIIKKK
NKPKEPPKLPKAAPFFIPTIPGLVPQFALPSTPSEDQSKIVNLGVLAQKSSFYLQLEKAL
DNNSYEEPVKLLRELGPSAIETELRALSPDLGGEVRVMESFLKMISSILQSKRDFDLAQA
YLALFLKLHLRFIAEQPELMEEAESVSAHLEETWMSMQTLLNQNICLLSYVKSALL
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatatgtctgcgggaaagaaaggaagcgtgatcttctctggattcagggcgctg
ggactttactcgaatcatctggcgcacgtgcttcgcttccatcagaaacacagagagttc
tatgtgctcactgctgtcggacagtgtttccacacctataatgtgaagaaactcggaatc
gttgcagtcagtaatgccctcccagaagacatttcatccctggcggcagatcgtatgctt
gtctatgctgcatacggaaaacttatctccgcttttgcaaaaaacaaagaggttgttcac
acatacacaggccatcaagctgatgtgcacttactgttgcctttcggagatcatctgatt
tctgttgacaaggataatgttgtcataatctgggatgtggagtctgaggacacatacctg
cagatttcatatgacaaagcatcatttgaagtatctgctttgatgcatccgagcacctac
ctgaacaaaatcctgttcggaagcagtcaagggagtctacagttatggaacgtcaaatca
aacaaactcttgttcacatttcctggatgggcatctgctgttactgttcttcaacagact
ccagctgtagatgttgtgggtgtgggtttagcgtctgggcagatcatcgttcacaatatc
agattcgatgaaacactgatgaagttccaacaagactggggtcccgtcacagctttatct
ttcaggacagatggacatccaataatggcttctggcagtcctattggacacattggtctg
tgggatttagaggagaagaaatttgtcagtcagatgcgcgatgctcacacaacagccatc
gctggtctcacgtttcttcaaaacgaaccgctcctgatcaccaatggagcagacaatgcc
atacgggtgtggatttttgatgttgccggaggagacggccgtctgttaagacagcggacg
ggtcacagcgccccaccaacaaagattcggcaccacgaccagagcagcttaaacattctt
agtgcaggtcaagatggtactttgcagtcattttcaactgttcacgaaagattcaacaag
agtttggggcacggcaccctcaacaaaacgagagctaaaaagaaaggcctgacgaatgac
acggcgaaacttccagccatcaccaggtttgctgcagaaacttctcgtcagagtgactgg
gatggcattattgcatgccaccgtggtttccttgtgaccacgacatggaactaccagaaa
ggttcgattggtgctcacaagctggaacctgaacgcttcaacaagaaccgtagcctcaat
gtccatgcaactgctgttgatatcacatcctgcgggaactttgcagtgattgcactgtct
tcaggacacattgatgtgtacaacatgcagtctggttttcatcgaggacattatggggag
gacaaggcacatgcaggggctgttcgcggggtctctgtggatgctctgaaccagttgact
gttagtgtgggagcagatcgccttctgaaaatctggaggttcagatccaaggagctgtta
catacacacagcctgccagctgccccagcgtcatctctgcttcacagggagagcggaatg
ctcgccatcgctctggatgattttaccatttacatcctagacatggagacaaggaggact
gtccgcagattctctggacaccgtgggcagatcaacgacatgacgtttagtccagatgga
cgttggctgattacagcgtctatggactgcaccatcagaacatgggatcttccatctggc
agtttggtcgactgtttcctggtagacgcagcagccgtcagtctcagtatgtcccctacc
gggaacttcctggcctcttcacatgtcgatggtctaggtatttacttatggtccaacaac
acactgtgcagtatggtgtcattgcgccctctacctgcagactacgagccgactgtgatc
atgctgccaggcacctgcccaagcagagatacagaagaggaggacattttagatgctgac
agctctgagatggatgagtacatttcaccagcacagctggacgagcatctgatcacactc
tctctgcttccggactcacgctggaagaacctgctgcacctggacatcatcaagaaaaag
aacaaacccaaagagcctccgaaattgcccaaagctgcacccttcttcattcccaccatt
ccagggctggtgccccagtttgcactccccagcactccctcagaggatcagtctaaaatt
gtcaacttgggagtgttggcacagaagtcctcgttctatcttcagcttgagaaggcttta
gacaacaactcatatgaggagccagtaaagctgttgagagagttaggcccctctgccatt
gaaactgaacttcgggccctgtcaccagatttgggtggagaagtccgagttatggagagc
ttccttaagatgatcagcagcatacttcagtccaaaagagatttcgacctggctcaagcc
tacctagcattgttcctaaagctccatcttcggttcatcgcagagcagcctgaactgatg
gaggaggcagaaagtgtgtcggcacacctggaggagacatggatgtccatgcagacgctc
ctaaatcagaacatatgtctgttgtcttatgtcaagagtgcactactgtaa
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