Carassius auratus (goldfish): 113084554
Help
Entry
113084554 CDS
T07313
Name
(RefSeq) ATP-binding cassette sub-family A member 1-like isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua02010
ABC transporters
caua04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
113084554
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
113084554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
caua02000
]
113084554
Transporters [BR:
caua02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
113084554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
Motif
Other DBs
NCBI-GeneID:
113084554
NCBI-ProteinID:
XP_026110666
Ensembl:
ENSCARG00000056743
UniProt:
A0A6P6NQP5
LinkDB
All DBs
Position
Unknown
AA seq
2268 aa
AA seq
DB search
MAVSTQLGLLLWKNFTYRRRQTIQLLIEIIWPLFIFFILISVRLHYPPFEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGETPGVVGNFNDSIISRLFTDAKKILLYSQQDK
SFDGFKGLVRALRKLQRNTEGFKLKDFLRDNETLSEFLENNASLPQHAVKQIVEANVNLE
KVLIKGFGVHLRDLCNTTSLEDFVTIADKNVSQLTQNIICQSSAEWLNNAESHFLSNLDF
LKPIRKDVKSDPKIFQDVSIATDSLLESLGALAVELVSMKSWRDMRNEIQYLTGNSSQSP
NHMYQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGNYGNDSDSEPVSVYDNSSTPYC
NSMMKGLESSPISRMIWRALKPLLMGKILYTPDTPATQRIIQEVNKTFQELGVLRDLGGM
WEEMRPKVWNFMESSEEMDLVRTLLQNNASARFFNAKLSGTNWRVEDVSSFLSKASEDTR
PHGSAYTWREVFNETDQAIQTISRFMECVNLDKLEPVANEERLVNKSMHLLDDRKFWAGI
VFPDMQANTSDLPPNVNYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYIWGGFSYL
QDVIEHGIIRALTGSKEKTGVYIQQMPYPCYVDDIFLRVMSRSMPLFMTLAWMYSVAIII
KGVVYEKEARLKETMRIMGLDNGILWLSWFISSLIPLLISAALLVLILKMGNLLPYSDPG
VVYLFLASFAVVTIMQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDYVGFGAK
LVVSLLSPVAFGFGCEYFALFEEQGVGIQWSNLLSSPMQEDSYSLTTSISLMFFDSLLYA
VMTWYIEAVFPGQYGIPRPWYFPFTKSYWCGEKCGGITSAPTNKKENAEAVCIEEEPAHL
DPGVYIENLVKVYSNGKLAVDDLTLGFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGT
AYIQGKDIRTDLNTIRQNLGVCPQHNVLFSMLTVEEHIWFYASLKGLSEEKVKSEMEQIV
MDLGLPHKRKSRTSQLSGGMQRKLSVALAFVGGSKVVILDEPTAGVDPYARRGIWDLLLK
YRQGRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKTQLGTGYYLTLVKKDFDL
SVSSCRTSSSTVSYSKASLKKEDSVSDSSSDAGLGSDHESETTTIDISLISNVIFKHVPT
ARLVEDLGHEITYVLPYESAKDGAFVELFHEIDDRLTDLGISSYGISDTTLEEIFLKVAE
DNGVDAEMSDGIIPARRNRRHAFGDHQSCLKPFTEDDFDFNDSEGDPESRETDWLGGADG
KGSYQVKGWSLKRQQFVALLWKRFLYARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGK
YPSLALEPSMYEEQFSFISNDAPEDRHTNKLLEALMDNPAYNVQCTDQKNAASKSCPIKD
GDWMVPEIPRTIQDIFVKGNWSMENPSPLCECSCEGSKKMLPECPPGAGGLPPPQIKVTI
NETLQNLTGRNISDYLVKTYAQIIGKSLKNKLWVNEFRYGGFSLGARSSQALPPGDEITV
AIAHIRNRFSLQTGTAADRFLGSLSTFIRGLDTKNNVKIWFNNKGWHSMGAFLNVMNNAV
LRANLPPGLDQSKFGIKAFNHPLNLTKEQLSQVALMTTSVDVLVSICVIFAMSFVPASFV
VFLIQERVNKAKHMQFISGVQPFLYWLANFVWDMCNYIVPATLVIIIFVCFQQEAYVSST
NLPVLALLLLLYGWSITPLMYPASFFFKIPSTAYVVLTSVNILIGINGSVSTFVLELFGS
NEIGGINDILKNVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFRSPLAWDMVGKNL
FAMAIEGVIFFCITVLIQYRFCIKARSVSTKLKPIGEEDEDVARERQRILCGGGHTDILE
LKQLTKVYKRKQKPAVDRLCVGIPPGECFGLLGVNGAGKTSTFKMLTGDSVVTSGEAYLA
GKSVLTEIDEVHQNMGYCPQFDAINDLLTGREHLEFYAILRGVPEKEVCEVADWGIRKLG
LMKYVDKAAGSYSGGNMRKLSTAMALIGGPPVVFLDEPTTGMDPKARRALWNCILSIIKE
GRSVVLTSHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNKFGDGYTIILRVTGADPQLE
PVMEFIERELPGSTLKEKHRNMLQYQLPSSLTSLARIFSLLSKNKEQLHIEDYSVSQTTL
DQVFVNFAKDQSDEDHLKDISINKNDAIVEMSHLNAFLVDEKAKETVV
NT seq
6807 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccactcagttgggtttgctgttgtggaagaacttcacttaccgacggaga
caaactattcagctgctgatcgagatcatatggccactcttcatctttttcatcttgata
tctgtcagactccactatcctccattcgagcaacatgaatgccactttcccaacaaggcc
atgccctctgcagggactttaccatgggtacagggcatcatctgcaatgccaacaacccc
tgctttcgctaccccacccctggagagacccccggggtggtgggcaacttcaatgactcc
atcatctcccgactgttcaccgatgccaagaaaattctcctctacagccaacaggacaag
agctttgacggttttaaaggactggtccgggccttgagaaaactgcagagaaacactgaa
gggttcaagctgaaggacttcctccgtgataatgaaacgttgtctgagtttcttgagaat
aatgctagcctgccccagcatgctgtgaaacagatagtggaggctaacgtcaacttggag
aaggttcttattaaaggcttcggtgttcatctcagagacctgtgcaataccacctctctg
gaggatttcgtgactatagccgataagaacgtgtctcagctgacgcaaaacatcatctgt
cagtcgtctgctgaatggctgaataacgcagagagccacttcctgtccaacctggacttc
ctgaagccaatacggaaagatgtcaagtctgacccgaagattttccaagatgtgtctata
gcaacagacagtcttctggagagtttgggagcgttagcggtggagcttgtgagtatgaag
agctggcgggacatgcgcaatgagatccagtacctgacgggcaacagctcgcagtccccc
aaccacatgtatcaggccgtgtcccgcatcgtctgcggtcacccggagggcggaggcctg
aagatcaagtccctcaactggtacgaggacaacaactacaaggccctgttcggaaactac
ggcaatgacagcgacagcgagcccgtctccgtctacgacaactcctccacgccctactgc
aacagcatgatgaagggcctggagtcgagtcccatatcccgcatgatctggagagctctg
aagccgctgctcatggggaagatcctgtacaccccagacacccctgccacccagaggatc
attcaagaggtcaataagacgtttcaggagctcggtgtgctcagggacctcggtggcatg
tgggaagagatgagacccaaagtatggaacttcatggagagtagtgaggagatggacctc
gttcggacgctcctccagaacaacgctagcgctcgcttctttaacgccaagctgagcggg
acgaactggcgtgtggaggacgtgtccagctttctgtccaaagcttcagaggacacgcgt
ccccatggttcagcgtacacatggagagaagtgttcaacgagacggatcaggccatccag
accatctcacggttcatggagtgtgtgaacttggataagctggagccggtggctaatgag
gagcgtttggtaaacaagtccatgcatctactggatgaccgcaagttttgggcggggata
gtgtttcctgacatgcaggccaacacatctgacctgccacccaacgtcaattacaagatc
cgcatggacatcgataacgtggagcgcaccaacaagatcaaggacggatattgggatccc
ggtcctcgagcggacccgtttgaagacctgcggtacatctggggtggcttctcctacctg
caggacgtgattgaacatgggatcatacgagctctgaccggcagcaaggagaaaacgggc
gtttacatccagcagatgccgtatccctgctatgtggatgacattttcctgcgggtgatg
agccgctccatgcctctgttcatgactctggcctggatgtactcggtggccatcatcatc
aagggtgtggtgtacgagaaggaagcccggctcaaggagaccatgaggattatgggtctg
gataatggtatattgtggctgagctggttcatcagtagtctgatcccactgctcatcagc
gccgccctgctggtgctcatcctgaagatggggaatctgctgccgtacagtgatcctggt
gtagtctacttgttcctggcctcgtttgcggtggtgaccatcatgcagtgtttcttgatc
agcacgctgttctcccgcgctaacctcgccgcggcctgcgggggcatcatatacttcacc
ctctaccttccctatgtgctgtgcgtggcctggcaggattacgtcggctttggagccaaa
ctagtagtgagcctcttgtccccggtggcgttcggcttcggctgtgagtactttgctctt
ttcgaggagcagggtgtgggcatccagtggagtaacctgctctccagccccatgcaggag
gacagctacagtctcaccacatccatctcgctcatgttcttcgattcgctgctctacgcc
gtcatgacctggtacattgaagctgtgtttccaggtcaatacggcatccctcgaccctgg
tacttccccttcaccaagtcatactggtgcggagagaaatgtggggggataacatcagca
ccgaccaacaagaaagaaaatgctgaagctgtgtgcattgaagaagaaccggctcacctg
gatccaggtgtttacatcgagaacctggtgaaggtttacagcaacggcaaactagcagtg
gacgatttgactctgggtttttatgagggtcagatcacctccttcctgggtcacaacggt
gctgggaaaaccacaaccatgtctatcctcactggcctgtttcctcccacctcgggcacc
gcttacatccagggcaaagacatccgcaccgatctgaacactatacgccaaaacctgggc
gtctgtccgcagcataacgtcctatttagcatgctcaccgtggaggagcacatctggttt
tatgcaagtctgaagggtttgtctgaggagaaggtgaagtcggagatggagcagatcgtg
atggacctcggcctgcctcataaacgcaaatctcgcaccagccagctctcaggaggaatg
cagaggaagttatcagtagcactggcgtttgttggagggtcaaaggtcgtgatcctggat
gagcccacagctggagttgatccttacgctcgccggggcatctgggacctgctgctcaag
tatcgccaaggacgcaccatcatcctgtccacccaccacatggacgaagccgatatcctg
ggggatcgcattgccatcatctcccacgggaagctgtgttgtgtgggctcctctctgttc
ctcaagacccagctggggacgggatattacctgacgctggtgaagaaggacttcgatctc
tcggtcagctcctgccgcacctccagcagcaccgtctcctactccaaagcaagccttaag
aaggaggacagtgtatctgacagcagctctgatgctggactgggcagcgaccatgaaagt
gaaaccaccacaatagacatctccttgatctccaatgtgattttcaagcacgttcctaca
gccagactggttgaagatctcgggcacgagatcacttacgttctgccttacgagtcggcc
aaagacggagcgtttgtggagctcttccatgagatcgacgaccggctcactgacctcggc
atttctagctacggcatctctgacacaaccctggaggagattttcctcaaagtggcagag
gacaacggtgttgatgctgagatgtcagatgggattatacccgcacgcaggaaccgcaga
catgcttttggtgaccatcagagctgcctgaagcctttcactgaagatgactttgatttc
aatgactctgaaggtgatccagaatctcgtgagacggactggctgggtggtgctgatggg
aaagggtcgtaccaggtgaagggctggagtctgaagagacagcagtttgtagccttgctc
tggaaacgcttcctgtatgccagacgttcccggaaaggtttctttgctcagattgtgctt
cccgctgtgttcgtgtgcatcgctctggtcttcagcctcattgtccctcctttcggaaag
tatcccagtcttgctctggagcccagcatgtatgaggagcagttctccttcatcagcaat
gacgcaccagaagacagacacacgaacaagttacttgaagctctgatggacaatcccgct
tacaatgtacaatgtacagaccagaaaaacgctgctagcaaatcatgtccgattaaagat
ggagactggatggttccagagattcctaggaccattcaggacatcttcgtcaaagggaac
tggagtatggaaaacccatcgcctctgtgtgagtgcagctgtgaaggaagcaaaaagatg
cttcccgagtgtccgccaggcgcagggggtctgccgccgcctcagatcaaagtcaccatt
aatgaaaccctgcagaatctgaccggcagaaacatttcagactacttggtgaaaacatat
gcacagattattgggaaaagcttgaagaacaagctctgggtcaacgaattcaggtatggt
ggattctcattgggtgctagaagctctcaggccctcccccctggcgatgagatcactgtt
gccatcgctcacattcgtaaccgtttcagtcttcaaacgggaaccgcggctgaccgcttt
ctgggaagcctgtcgactttcatccgaggtctcgataccaagaacaatgtgaagatctgg
ttcaataacaagggctggcacagtatgggagccttcctcaatgtcatgaacaatgccgtc
ctgcgtgctaatcttccccccggcctggatcagtccaaattcggcatcaaagcatttaac
catccgctcaacctcaccaaagagcagctctcacaggtggcactaatgacgacctcagtc
gacgtgctggtgtccatctgcgtcatcttcgccatgtctttcgtcccggccagctttgtg
gtgttcctcatccaggagagagtgaataaagccaaacacatgcagttcatcagcggagtg
cagcccttcctctactggctggccaactttgtgtgggacatgtgcaactacattgtccca
gcgaccctggtcatcatcatcttcgtctgtttccagcaagaggcctacgtgtcctccacc
aatcttcctgttctcgccctcctgctgctgctctatgggtggtccataacacccctgatg
tacccagcatcattcttctttaagattcccagtacagcgtatgtggttttgaccagcgtt
aacatcctcattggaataaatggcagcgtatccacattcgtcctggagcttttcggcagc
aatgagattggcggcatcaacgacatcttgaagaacgtgttcctgatcttccctcacttc
tgtctgggcagaggactcattgacatggtgaagaaccaagctatggcagacgctctggag
agattcggcgagaatcgcttccgctctcctctggcgtgggacatggtgggcaagaatctc
tttgccatggccatagaaggcgtgattttcttctgcatcaccgtccttatccagtaccgt
ttctgcatcaaggccaggtcggtcagcactaaactgaagccgatcggagaggaggatgag
gatgtggccagagagaggcagaggatcttgtgcggaggaggacacactgatatcctggag
ctcaaacagcttaccaaggtttataagagaaagcagaagccagctgttgacagactgtgt
gtgggcatcccaccaggggagtgttttgggttgctcggtgtgaacggagctggaaagacg
agcaccttcaagatgctcacaggagattcggttgtcactagcggagaggcctacttggca
ggaaagagcgtgctgacggagatcgatgaagtgcatcagaacatgggctactgtccgcag
tttgatgccatcaacgacctgctgactggacgagaacatctggagttttacgccattctg
cggggcgtcccagagaaggaagtgtgcgaggtggcagattggggcattcgtaaactgggc
ctgatgaaatatgtagacaaagctgctggcagctacagcggaggaaacatgaggaagctc
tccaccgctatggctctcatcggaggaccgccagtggtgttcttagatgaacccaccact
gggatggaccccaaagcccggcgggccctgtggaactgcatcctcagcatcattaaagag
ggacgctcggttgtcctgacctcacacagtatggaggagtgtgaagcgctctgcactcgc
atggccatcatggtgaacggcaggttccgctgtctgggcagtgtgcagcacttaaagaac
aagttcggtgacgggtacaccatcatcctgcgggtgacgggggccgatccgcagctggag
ccggtgatggagttcatcgagcgggagctgccgggaagcacgctgaaggagaagcacagg
aacatgctgcagtaccagctgccctcgtcgctgacatccctcgcccgcatcttcagcctc
ctctccaagaacaaagagcagctccacatcgaggactactccgtctcacagaccacttta
gatcaagtatttgtcaattttgccaaggaccaaagtgacgaggaccacttaaaagacatt
tccattaacaaaaacgatgcaatcgtggaaatgtctcatctgaatgccttcctcgtggac
gagaaggccaaagagactgtggtgtga
DBGET
integrated database retrieval system
