Carassius auratus (goldfish): 113085455
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Entry
113085455 CDS
T07313
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2-like
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113085455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113085455
Spliceosome [BR:
caua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
113085455
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
113085455
NCBI-ProteinID:
XP_026110929
Ensembl:
ENSCARG00000001661
UniProt:
A0A6P6NR84
LinkDB
All DBs
Position
5:30155274..30163818
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AA seq
498 aa
AA seq
DB search
MIAGVKRERDVDEDEEEEVRVKVGRSHGVEDRRSRHCPYLDTINRSVLDFDFEKLCSISL
SHINVYACLICGKYFQGRGQKSHAYIHSVQFAHHVFLNLHTLKFYCLPDNYEIIDSSLED
ITYVLKPTFTKQHIAGLDKHGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPP
LRNYFLEEENYGRIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSK
KTFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPAEE
KEALLLKDEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILAKFNGNNEKE
YKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQ
VTEKVTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYI
QIWKRQDKDDGAEQHTGA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagagacgttgatgaagacgaagaggaagaggtgcgt
gtgaaagtcggtcgctctcatggtgttgaagaccgaaggagccgccactgtccatatctg
gacacaatcaacaggagtgtcctggatttcgacttcgagaagctttgttcgatctcgctc
tcacatattaatgtctacgcctgtctgatctgcgggaaatacttccaaggtcgaggtcag
aagtctcacgcgtacatccacagcgttcagttcgcacaccacgtgttcctcaatctccac
acgttaaagttttactgcctgccggacaattacgagatcatcgactcctcattagaggac
attacgtatgtgctgaaacccacgttcaccaaacagcatatcgctggtctggataagcac
ggaaagctgtacagagcctacgatggcacgacatatctgccaggaattgtgggtctgaat
aatataaaggccaatgactatgctaatgtggttttgcaggctttgtcaaacgtgccgcct
ctgcggaactacttcctggaggaggagaactacggcaggatccgccggccgccgggtgac
atcatgtttctgttggtgcagcgcttcggggagctcatgcgcaagctctggaacccgcgt
aacttcaaagcacacgtgtcaccgcatgaaatgttgcaggccgtggtgttgtgcagcaaa
aagacctttcagatcactaaacaaggggacgctgttgactttctgtcctggtttctgaat
gcattgcatggtgctcttggtgggacaaagaagaaatcatccatcctcaccaaggtgttt
caggggtccatgcgaatcttctcaaagaagcttccccatccagatttgcctgcagaagag
aaagaagccctcctcctgaaggacgagtatcaggaggagatgtcagagtccaccttcctg
tacctgaccctggatctgcccaccgcacccctctacaaagatgagaaggagcagctcatc
attccccaggtccctctcttcaacatcctggccaagttcaacggaaacaacgagaaggag
tacaagacgtacaaggagaacttcctgaaaaggttccagctcaccaaacttcctccgtac
ctcatcttctgcatcaagcgcttcaccaagaacaacttctttgtggagaagaacccgact
attgtcaacttccccatcacgaacgttgatttgcgcgagtacctgacggaagaggcgcag
gtcacagagaaggtcaccacctacgacctggtggccaatgtagtccacgacgggaagccc
actgaaggatcctacaggattcatgtcctgcatcacggcacagggaagtggtacgagctt
caagacctgcaggtgatcgacatcctcccacagatgatcacgctctcagaggcttacata
cagatttggaagagacaagataaagacgatggcgcagagcagcataccggggcgtag
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