KEGG   Carassius auratus (goldfish): 113087350
Entry
113087350         CDS       T07313                                 
Name
(RefSeq) CCR4-NOT transcription complex subunit 4-like
  KO
K10643  CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]
Organism
caua  Carassius auratus (goldfish)
Pathway
caua03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:caua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113087350
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:caua03000]
    113087350
   03019 Messenger RNA biogenesis [BR:caua03019]
    113087350
   04121 Ubiquitin system [BR:caua04121]
    113087350
Enzymes [BR:caua01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     113087350
Transcription factors [BR:caua03000]
 Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    113087350
Messenger RNA biogenesis [BR:caua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     113087350
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     113087350
Ubiquitin system [BR:caua04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    113087350
SSDB
Motif
Pfam: zf-RING_4 zf-C3HC4_2 zf-RING_2 Rtf2 zf-UDP DZR_2 zf-C3HC4 FYDLN_acid RDD1 PknG_rubred Baculo_IE-1
Other DBs
NCBI-GeneID: 113087350
NCBI-ProteinID: XP_026111358
UniProt: A0A6P6NS14
LinkDB
Position
Unknown
AA seq 134 aa
MSRSPEVKEDPMECPLCMESLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEELQKIKNEKKQKQNERKQKITENRKHLSSVRVVQRNLVFVVGLSQRL
ADPEVIQQNTLTTV
NT seq 405 nt   +upstreamnt  +downstreamnt
atgtcccgcagccctgaggtgaaagaggaccccatggagtgcccgctgtgcatggaatca
ttggagattgatgacgtcaatttcttcccttgcacctgtggctatcagatctgccgcttc
tgctggcatcgcatacgcacagatgaaaacggcctctgcccggcctgcagaaagccctat
ccagaagaccctgcagtatacaaacctctctctcaagaggaacttcagaagataaagaac
gagaaaaagcagaagcagaatgagcggaagcagaagatcacagagaaccgcaagcatctc
tccagtgtgcgagtcgtccagagaaacctggtgtttgtggtgggcctttcgcagagactc
gctgacccagaggtgattcagcaaaacacactgaccactgtgtaa

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