Carassius auratus (goldfish): 113087732
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Entry
113087732 CDS
T07313
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1-like
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
113087732
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113087732
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
113087732
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
Motif
Other DBs
NCBI-GeneID:
113087732
NCBI-ProteinID:
XP_026111435
Ensembl:
ENSCARG00000056851
UniProt:
A0A6P6NR45
LinkDB
All DBs
Position
5:16404657..16411409
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AA seq
717 aa
AA seq
DB search
MSTSEDSSPTFFLETDDLTDEERSKFKQVKKGTSKDKRPMDSDYLEETDESAHTIKFNLN
FDRGIRNVKEEPAQQDRERFTLKMLFDAVSSGNVSKLQGLHEYLHKNMKRLTDSEYKSNG
KTALLKALLNLKEGENDTIELLLEIAEKTGDLNNLVNAAYTDIYYKGQTALHVAIERRSA
KFVKMLVEKGADVHAKACGKFFQPNQEACFYFGELPLSLAACTNQPDIVDFLMDNPYKRV
DVGNRDSHGNTVLHALVSIADNSPENTEFVIAMYDHILLKADQLHPEIKLEEIKNNKGLT
PLTLAAKTGKVVLLKHIVQREFKGCKHLSRKITEWAYGPVCSSLYDLSSLDTYEKNSALE
IIVYGSEIPNRLEMLNIEPFNRLIKEKWERFAKRMFLFNFIVYVIYLFILTAVAYHHKEG
KDLTNNQKYPRPHETDVVYIPDQHVGLFLQAVLFLACALLYFFGQDKYVACLVLCLALSW
VNLLYFSRGSKNMGIYRVMIQKMFLGEICRFLVVYMVFLIGFSAAVVTLLNDSVPKGRSL
FVPITGNENCKKPSFKSIYYTTLELFKFTIGMGDLEFTDQFQYIEVFYVLLILYIVMTYI
LMLNMVIALMNQRVEEMSVESTSIWKLQRAITTLDMEWILPRCLKTKLRSGEEKDLGGEQ
EPDRRWCFSVEEVNWNLWNRNLGVVTEDPGKCIPVPSPTKLQRGSQCLTNVCMCVLF
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgagtacatcagaagacagcagccccacattcttcctggagaccgatgacctgacagac
gaggaaaggtcaaagttcaaacaggtgaagaaaggcacctcaaaggacaagagacccatg
gattctgattacctggaggagacagatgagtctgcacacacaattaaatttaacctaaac
tttgacaggggaatcagaaatgtgaaagaggaaccagctcagcaggacagagagaggttt
acactcaagatgctgtttgatgccgtgtccagtgggaatgtgtctaaactgcagggttta
cacgagtacctgcacaaaaacatgaaacggctcaccgactctgagtataagtccaatgga
aagacagctctgctgaaagcacttttaaatttgaaggaaggcgagaatgacactattgaa
cttctgctggaaattgcagagaaaacgggagatttaaacaatttagtcaatgctgcctac
acagacatttactacaaaggtcagacagctctccatgttgcaattgaaaggaggagcgca
aaatttgtaaagatgcttgttgaaaaaggggctgatgtccatgctaaggcctgtgggaaa
ttctttcagcccaatcaagaagcatgcttctattttggtgagctgcccttgtctctggcc
gcttgcactaatcagccggacatcgttgacttccttatggacaatccttacaagagggtg
gatgtcgggaacagggactctcatggaaacacagtgcttcacgcactagtatccatagct
gataacagtcctgaaaacacagagttcgtcattgccatgtatgaccacatcttattgaaa
gccgaccaacttcacccagagatcaagctggaggaaatcaaaaataataaaggactcact
ccactcacactagctgccaagacaggaaaagtggtgctgttaaagcacatcgtgcagcgg
gagtttaaggggtgcaaacatctgtcacggaagatcacggagtgggcttatggtccagtg
tgctcgtctctgtatgacctctcctctctcgacacctatgagaagaactctgcgctggag
ataatcgtttatggcagtgagattcctaatcgtctcgagatgctcaatattgagccattt
aacagactaattaaagagaagtgggagagatttgcgaaacggatgttcttgttcaatttt
atagtttatgtaatctaccttttcatcctcactgctgtagcttatcaccacaaagaaggg
aaggacttgacaaacaaccaaaaatatccgcgtccacatgaaaccgatgtagtatacatt
ccagaccagcatgtggggctttttctgcaggccgtgctctttctggcgtgtgcactactg
tacttctttggtcaggataaatatgtggcctgtctagttctgtgtcttgccttgagctgg
gtaaatctactctacttctccagagggtccaaaaatatgggaatctacagggtcatgata
caaaagatgtttcttggagaaatttgtcgattccttgtcgtgtacatggtcttcctcatt
gggttctctgcagctgtggttacactccttaatgatagcgtacccaagggacgatcttta
tttgttcctattactggaaatgaaaactgtaagaagccctcattcaagagcatctactac
accactctggagttattcaagtttacgataggcatgggagatctggagttcaccgatcag
tttcagtatatagaggtcttctatgtgctgctaatattgtatatagtgatgacttacatt
ttgatgctgaacatggtgatcgctctgatgaatcaaagagtggaggagatgtctgtagag
agcaccagcatctggaaactacagcgtgcaatcaccaccttggacatggagtggattctt
ccccgctgtctgaagacaaagctgcgctccggggaagagaaggatctaggcggggagcag
gagcctgaccgacgctggtgcttcagtgtggaggaagtcaactggaacctgtggaacaga
aaccttggtgtagttaccgaggatcctgggaaatgtatacctgtaccatccccaactaaa
cttcagagaggtagtcaatgtttaacaaacgtgtgtatgtgtgtgttattttaa
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