Carassius auratus (goldfish): 113088247
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Entry
113088247 CDS
T07313
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113088247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
caua03041
]
113088247
Spliceosome [BR:
caua03041
]
Complex C
Other components
Step II factors
113088247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
EIF3I
WDR55
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_NWD2_C
WD_LRWD1
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
113088247
NCBI-ProteinID:
XP_026111502
Ensembl:
ENSCARG00000021295
UniProt:
A0A6P6NRJ1
LinkDB
All DBs
Position
Unknown
AA seq
578 aa
AA seq
DB search
MAAAAASLVSYGSDSDSENESKSGTSPEKVDPDALAHLQPLKSGSVTSIAVLNSAPEVAV
KEDVMTGVHLDPALKEVTYNPSYETMFAPEFGPANPFRSQQMAAPRNMLSGYAEPAHVND
FMFEQQRRTFSTFGYALDPSLDTSQVSSSSYIGAVEEAEKNKGLMAFETGVKKSEKRKKV
KGGDASDIESFLGPWAKYQDERDVAKPSEDEKKELDEILAKRQKRGKNEEEAPAEEKTIL
HIKDAYDYQGRSYLHVPQDVGINLRSADVPDKCYLPKKQLHVWTGHTKGVSAIRLFPRSG
HLLLSCSMDCKIKLWEVYNDRRCARTFIGHSKAVRDVCFNNTGTQFLSAAYDRYLKLWDS
ETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAV
NTITFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSM
DNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVVSGDADGKLNIWDWKTTK
LYHRIKAHDKVCISALWHPHETSKVITCGWDGQIKLWD
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcagcttccctcgtttcttacggcagcgactcagattcggaaaacgag
tctaaatccggtacaagtccggagaaagtcgacccagacgcgctagctcatctccagccg
ttaaaatctggcagtgtaacgtccatagccgtgctgaattccgcgcccgaggtcgccgtg
aaggaagatgttatgaccggggttcatctcgatccagcgctcaaagaagtcacatataac
ccctcgtatgaaaccatgtttgctcccgagtttggaccagcgaacccgttcagatcgcag
cagatggcggcgccgaggaacatgctgtctggttacgccgaaccggcgcacgtcaacgac
ttcatgtttgagcaacagaggagaaccttctcgacattcgggtacgctctggacccgtct
ctggacaccagtcaggtctcgtccagcagctacatcggagccgtggaggaagcagagaag
aacaaaggtctgatggcgtttgagacgggggtcaagaagtcagagaagaggaagaaggtg
aaaggtggagacgcttcggacatcgagagcttcctcggaccctgggccaaataccaggat
gagagagacgtggccaaaccctccgaggacgagaagaaagagctggacgagatcctggcc
aagagacagaagagaggcaagaatgaagaagaggctccagcggaggagaagaccatcctg
cacattaaagatgcgtacgattaccagggccgctcgtacctgcacgttcctcaggacgtg
ggcatcaacctgcgctcagcagacgtcccggacaaatgctacctgcccaagaaacagctg
cacgtctggaccggacacaccaagggggtcagtgccatccgtctgttcccgcggtctggt
catctcctgctctcctgctccatggactgtaagatcaagttgtgggaggtgtataatgac
aggagatgtgcacggacctttattggtcacagtaaagccgtgcgtgacgtgtgcttcaac
aacactggcacacagttcctgagcgccgcctacgaccgatatctgaagctctgggactcg
gagacgggtcagtgcatctcacgcttcaccaacaggaaggttccctactgcgtcaagttc
aacccggacgaggacaaacagaacctgtttgttgctgggatgtcggacaagaagatcgtc
cagtgggacatccgctccggtgaggtggttcaggagtacgacagacacctcggcgccgtt
aacaccatcacattcgtggacgagaaccgccgcttcgtcagcacctcggacgacaagagc
ctgcgcgtctgggagtgggatattcctgtggacttcaagtacatcgctgagcccagtatg
cactcgatgcctgcggtcacactctcgcccaacgggaagtggctggcgtgtcagtccatg
gacaatcagatcctgatcttcggagcgcagaacagattccggctcaacaagaagaagatc
ttcaagggtcacatggtggcgggatacgcctgtcaggtggacttctctccggacatgagt
tacgtggtttccggcgacgctgacgggaagctgaatatctgggactggaagacgacgaag
ctgtatcaccgcatcaaggctcatgataaggtgtgcatcagcgcgctctggcatcctcac
gagacgtcgaaagtgatcacctgcggctgggacggacagatcaagctctgggactga
DBGET
integrated database retrieval system
