Carassius auratus (goldfish): 113088627
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Entry
113088627 CDS
T07313
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
caua
Carassius auratus (goldfish)
Pathway
caua05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
113088627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113088627
03021 Transcription machinery [BR:
caua03021
]
113088627
Transcription factors [BR:
caua03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
113088627
Transcription machinery [BR:
caua03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
113088627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
POU2F1_C
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
113088627
NCBI-ProteinID:
XP_026111583
Ensembl:
ENSCARG00000027148
UniProt:
A0A6P6NSN2
LinkDB
All DBs
Position
1:complement(16512395..16596272)
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AA seq
638 aa
AA seq
DB search
MADRGLTTQDERSTADSSGHPADQNKSSMENGAQGADQANGLDAHKSNGQGTSAISNVQA
QALLQQLSLTPAQVLLPQTQAQLLAAAVQQSGSQQSSTTGASISASAATPITLSQPIQIA
SQLQPQGLNLQQFVLVQPGHSISPQIQPQFIISPSPQGQTGLLQAQNLLTQLPQSQANLL
PTQTSITLTTQAATPTRKIAAMPAPAVATPKHMDAPCVEEASDLEELEQFAKTFKQRRIK
LGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAENMSADCV
VSSQNEMSPGLCESLNRRRKKRTSIETSIRLALEKSFLEQSQKPSSEEITLIADQLNMEK
EVVRVWFCNRRQKEKRINPPSSIGGSPGSAIKTIYSSSTTAVSSSTNTLTVNSVVPLNNS
ISNLTLSGGVLGQVMSNSPSVISMAPAVTTSAPAVTSHSISPSATTVKKEIAAQPVSIAT
TATQGAGQLLVTGTGLGGANLTAVTGLNPTIITPSQLTQGGAFLSLAPALGNAFGPALMN
NNALATIQALTSGGILPLNSINGNTGLLFANTSAGSSSPSLVTTPLFLNPSSLSLLPSNL
LSAGGAGGGAFNLQLASDLQQSSVATTTKSIALASKAQ
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaggattaacgactcaagatgagcgctcgactgcagattccagtggccac
ccagcagatcaaaataaaagcagcatggaaaacggagcacaaggagcagatcaggccaat
ggtctggacgcccataaatcaaatggacaaggaacaagtgcaatcagcaatgttcaggca
caagcactgctccaacagttgagtttaactccagcgcaggtattgttgccgcaaacgcag
gcgcagctcctcgccgcagccgtgcagcagtctggaagtcaacagagcagcaccactgga
gccagtatttctgcctctgcagccacgcccatcacactgtcccaaccaattcagattgcg
tctcagctgcagcctcagggtttgaacctgcagcagtttgtgttggttcagccaggccac
tccatcagtcctcagattcagccgcagttcatcatatcaccttcacctcagggtcagacc
ggtctcctgcaagctcaaaatctcctgactcaactacctcaaagtcaagctaacctcctc
ccaactcagaccagcatcaccctcaccacacaggcggccacaccaacaagaaaaattgcc
gccatgccggctccagcggtggccactccaaagcacatggatgcaccgtgtgtagaggag
gccagtgacctcgaggagcttgaacagtttgcaaagactttcaaacaaaggcgcatcaag
ctgggcttcactcagggtgacgtggggttggcgatggggaaactctatggaaatgacttc
agccagaccacaatttccagatttgaggccttgaacctgagcttcaagaacatgtgcaaa
ctcaaacctctgctagagaaatggctcagcgatgcagagaacatgtctgctgactgtgtg
gtgtcgagtcagaatgaaatgtctccgggtctctgtgagagtctgaaccggcggcgtaag
aagcggacaagcatcgaaaccagcatccgtcttgccttagagaagagcttccttgagcag
agtcaaaagccatcatcagaggaaatcacgctgattgcggatcagctcaacatggagaag
gaggtggtacgcgtttggttctgtaaccgcagacagaaggagaaacggatcaatcctccc
agtagcatcggcggatcgcctggatcagccattaaaactatctacagcagctccaccaca
gcagtgtccagcagcacaaacacactgactgtcaattctgtggttcctctaaacaacagc
atctcaaacctcacactcagtggtggagttctgggtcaggtgatgtctaactcaccgtct
gtcatctccatggctcctgctgtgaccacttctgcccctgccgtgacatcacactcgatc
agcccgtctgccactaccgtaaaaaaggaaattgccgctcagccagtttccattgcaaca
acagccacgcagggggcagggcagctgctggtgacaggtacaggactgggcggtgctaat
ctgactgctgtcacaggcttgaacccaacaatcataacgccatcacaactgacgcaaggt
ggggcgtttttgagtttggctcctgctctgggaaacgcttttggtcctgcgctgatgaac
aacaatgcactggccaccatccaggctctgacttcgggtggcattctgcctctgaactcc
attaatggaaacaccggcctgctattcgccaacaccagtgcaggaagctcttcccccagt
ctggtgaccacgcccctcttcctcaacccatccagcctctctctactaccatccaatctg
ctgtcagcaggcggggctggaggcggagctttcaacctgcagctggccagtgacttgcag
cagagttctgttgccacgacaaccaagagcattgccttggcctcaaaggctcagtga
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