Carassius auratus (goldfish): 113089635
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Entry
113089635 CDS
T07313
Name
(RefSeq) protocadherin-20-like
KO
K16498
protocadherin delta 1
Organism
caua
Carassius auratus (goldfish)
Pathway
caua03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
113089635
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
caua01009
]
113089635
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
caua04515
]
113089635
Protein phosphatases and associated proteins [BR:
caua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
113089635
Cell adhesion molecules [BR:
caua04515
]
Cadherins
Protocadherins
113089635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
TM_ErbB1
FAM176
DUF4139
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
113089635
NCBI-ProteinID:
XP_026111878
Ensembl:
ENSCARG00000050329
UniProt:
A0A6P6NTF2
LinkDB
All DBs
Position
Unknown
AA seq
868 aa
AA seq
DB search
MWNTKRGTCLHSKGELWGLFILFLYTIPLSSSSNFSHLIYKIKEGLPKGTLIGAISADLK
LDLSVSPPRSFNLELKTARQQYVNLNNTSGELFTSAVEIDREALCAESHEGQGCAIFLDV
LILPQQYFQLVKVKIIIEDVNDNHPHFPVGDIRVSVPENAPVNARFAVEQSAVDPDIGIH
SVQTYWLANDYGVFTLDVEENEGGELTPFLIITESLDRETQAEYVTDIIAEDGGTPPLLG
TATLRIIITDVNDNCPKFTESLVNVTIYGNATKGMQLARLEAYDPDEGANALITYTFSER
VTQESRNLFHLDTNTGVLKLAGKIDNNTGKLYKLIVLANGPTCIPEVATVNVHVIKQLSG
PPVVIPRYIASEKDGVVSLSESEPAFTPIAFFTIKNTEPQQKIECLLEGAGPFRLVPYER
IKNEFLLETTELLDYEQQQDYEIVVVVRNSHGLVVNTIVKVHVLDVNDNAPVFKQSFIEI
TVEENNPPNTFLAQLQATDADSESRGEVYYLLGADAPTIFDLDRSTGVLTVSTSLDREEK
ETYRFMVRAVDRGTPRKESIATVIITVQDRNDNSPRFINKDFTFFVPENFPGFGEIGVLT
VTDADAGENGWVALSILNGSDIFVIDTGRGALRAKTSLDREQQGTYYVWIEAIDGGEPAL
SCITTVTVLLLDVNDNPPTVLFPQSNQSYMLVLPNTLPGTSITEVYAVDRDTGMNAVIAY
SIIKRTDGEPGSFDIDPYTGNITLRKTLSNRGLYSLWVKVRDHGQPELYSTVLVNLFVNE
TVSNETLIQSLLPRSVDIDHGELPPDKKGRKGEQVPNMCGEYRVLLLALTATCLGLFLTV
VSLVTYICCKRRKPKKKRSDIEIPLNSL
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacactaaaagaggaacctgcctgcacagcaaaggagagttatggggtttgttc
atcctcttcttgtacaccattcccctctcctcctcgtcaaatttcagtcacctcatctat
aagataaaagaaggattacctaaagggacacttataggggctatcagtgcggacttaaaa
ttggatctttctgtcagccctcctcgttcattcaatctggagctaaagacggccagacag
cagtacgtgaatctgaataacacgtcgggggagctgttcacatctgctgtggagattgac
agagaggctctgtgcgcggagtcccacgagggccagggctgcgcaatctttctggacgtg
ctaatccttcctcaacagtactttcagctggttaaggttaaaattattattgaggatgtg
aatgacaaccacccgcatttccctgttggagatatcagggtgtctgtgccggagaacgca
cctgttaatgcaaggtttgcggtggagcaatccgcagtcgatcctgacatcgggattcac
agcgttcaaacatactggcttgctaatgactatggagttttcacattagacgtagaggag
aacgaaggcggtgaactgacaccctttctcatcattaccgagtctcttgatagagagaca
caagctgagtatgtgactgacattatagccgaggacggaggcactccgccgcttctaggc
actgcaactctgaggatcatcatcacggacgtcaacgacaactgtcccaagtttacagag
tcactagtgaacgttactatttacggaaatgctactaagggcatgcaactggctcgtcta
gaagcctacgatccagacgagggagccaacgccttgatcacttatactttcagcgaacgg
gtcacccaggaaagcagaaacctgtttcatttggatacaaacactggggttcttaaacta
gcaggaaagattgacaacaacaccggaaaactctacaaactaatcgtgctggccaatggg
ccgacttgtattccagaagttgcaacagttaacgttcacgtcatcaaacagctctccggg
cctccggtggttatcccacgttatattgcgtccgagaaggacggtgttgtgagtttaagt
gaatcagagccagcgtttacacccattgctttttttaccatcaaaaacaccgagccacaa
cagaagatagagtgtcttcttgaaggtgcaggtccgtttagacttgtaccgtatgagcgg
attaaaaacgaattcctgcttgagaccaccgagctattggattatgagcagcaacaggat
tatgaaatagttgttgtggttcgtaactctcatggattagtagttaacaccatagtgaaa
gtccacgtgttggatgttaacgacaatgctccggttttcaagcaatctttcattgaaatc
acagtggaggagaacaacccaccaaatacattcctcgctcagcttcaggccaccgatgca
gacagtgaaagtagaggcgaggtttattacctactcggtgccgacgctcctaccattttt
gacttggatcggtcaaccggagtactgacggtgtccacttctcttgaccgagaggaaaag
gagacgtatcgtttcatggtgcgagccgtagaccgtggcacgccgagaaaggagtcgatc
gccactgtgattatcaccgtccaggatcggaatgacaacagtcctaggttcatcaacaag
gacttcaccttctttgtgccggagaactttccaggttttggggaaattggcgttcttact
gtcacagatgcggatgctggggagaacggctgggtggcgttgtccatccttaatgggagc
gacatcttcgtgattgacaccggacgaggagcgctgcgggccaagacctctctggaccgg
gagcaacagggaacgtattacgtttggatcgaggcaatcgatggaggcgaacctgctctt
tcttgcatcacaacggtgactgttctcctactggatgtcaacgataaccctccgactgtt
cttttcccccagtccaaccagtcgtacatgttggtgcttcccaacacgcttccgggaacg
tctataacggaggtttacgcggtggaccgggacactggaatgaacgctgttattgcatac
agcatcatcaagagaacggatggagagccaggctcgtttgacattgacccctatacggga
aacatcaccttgaggaaaaccttgagcaatcggggcctctacagtttgtgggtcaaagtc
agggaccacggtcaaccagaactctactctaccgttctggtcaacctgtttgtgaatgaa
acagtcagcaatgagaccctcattcagagtttgttgcccagaagtgtagatattgaccat
ggtgagcttcctcctgataagaaagggaggaagggagaacaagtgccaaacatgtgtggc
gagtaccgagtgttactgcttgcactgacagctacctgcctgggattgtttctgaccgtt
gtgtcgttggtgacttacatctgctgcaaaagaagaaaaccgaaaaagaagagatcagac
attgagattcctttaaattctctttaa
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