Carassius auratus (goldfish): 113089654
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Entry
113089654 CDS
T07313
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1I-like
KO
K04856
voltage-dependent calcium channel T type alpha-1I
Organism
caua
Carassius auratus (goldfish)
Pathway
caua04010
MAPK signaling pathway
caua04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
caua04040
]
113089654
Ion channels [BR:
caua04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
113089654
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
113089654
NCBI-ProteinID:
XP_026111882
UniProt:
A0A6P6NSM5
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Position
6:complement(1298876..1454618)
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AA seq
1966 aa
AA seq
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MMVILLNCVTLGMYQPCENIDCSSERCQILQAFDAFIYIFFALEMVVKMVALGIFGRCSY
LGDTWNRLDFFIVMAGVVEYSLDLQNVNLTAIRTVRVLRPLKAINRVPSMRILVNLLLDT
LPMLGNVLLLCFFVFFIFGIIGVQLWAGLLRNRCYPPENFTLSTGVALPAPYYSLDEKDE
RPFICSLPQDNGIMSCGDVPARRVAGHQCCLDVDDLLHHQALGLVTEPFLNASAVVPGLC
VNWNQYYTRCHTGHRNPHKGAINFDNIGYAWIVIFQVITLEGWVEIMYYVMDAHSFYNFI
YFILLIIIGSFFMINLCLVVIATQFSETKQREHQLMEEQRAARLSSSTLDSLVGPSDCYE
EIFQLVCHILRKVRRRTAAFCRMLCYKPPEQEHEKTNINGREKSLQQQDGTAPSTSAANQ
ETEEEAAMRKDRNKREEGACQRRSHELWMEMRVKLRGIVESKYFNRGIMVAILINTISMG
IEHHEQPEELTNVLEICNIVFTSMFALEMILKLTAFGFFNYLRNPYNIFDGIIVIISVCE
IVGQSDGGLSVLRTFRLLRVLKLVRFMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSI
LGMHIFGCKFSLKTDTGDTVPDRKNFDSLMWAIVTVFQILTQEDWNVVLYNGMASTSPLV
ALYFVALMAFGNYVLFNLLVAILVEGFQAEGDANRSHSDDDDEGTSCNGSEQHKNSLTSS
DPKLSSLTPNGHLDLAPLEEEKTRTEFSEEHHQSKAICLGRRSSSLLHSRSSHYHHWGRP
PSQPSWSRRCSWNSAGHSVRGLRAGGVIGGSLRVRSIHSNSAEHESLLLHPPFLSRRHRR
ALSLELPELLQRPPLVRKKSVSAEHQDCNGKGPGPQGTLLGEVYPQLNAHKDKNNLVEDT
EYSLCFRIQKMMEVYRPDWCEKREDWSIYLFSPQNKFRLLCQTIIAHKLFDYVVLAFIFL
NCITVALERPRIHQGSLERVFLTISNYVFTAIFVAEMTVKVVSKGLYVGDRAYLRSSWNI
LDGFLVFVSLVDIVVSMTGGAKILGVLRVLRLLRTLRPLRVISRAPGLKLVVETLITSLK
PIGNIVLICCAFFIIFGILGVQLFKGKFYYCVGLDVKNITNKSDCLSANYRWVHHKYNFD
NLGQALMSLFVLASKDGWVNIMYHGLDAVGIDQQPVINNNPWMLLYFISFLLIVSFFVLN
MFVGVVVENFHKCRQHQEVEEARRREEKRLKRMEKRRRKAQRLPYYSSYGRVRLMIHSFC
TSHYLDLFITLIICINVVTMSLEHFNQPQSLETALKYCNYFFSSTFVVEAMLKLIAFGFR
RFFKDRWNQLDLSIVLLSVMGIILEEIEISASLPINPTIIRIMRVLRIARVLKLLKMATG
MRALLDTVVQALPQVGNLGLLFVLLFFIYAALGVELFGELVCNVDYPCEGMSRHATFENF
GMAFLTLFQVSTGDNWNGIMKDTLRECPPGDNYSCNSSLQIISPMYFVSFVLTAQFVLIN
VVVAVLMKHLDDSNKEAQEDAEMEAELEMELAQGSLCCMGHLERATGTDAGERLPMAVVH
TNTNTSQSGFPQNQRRLYSPAQENQWLESVSLLMKDSLDGEMQMIDNLSGSVFHHYCSPP
IRRDSRSQSEEIRLAEVEQTSLMSEQLSDKSSSPALTDDISLDEHSDCKEHGSTDRSTDE
LVGRSFLPRSEASSPGRDRRDVRHETSHHRADGSGGDGQMSSPLFHLPAEFFHPNTAAIP
QGSPATGAAQPGSRHASPASWASLRSPGANSRVIGSQTSHSNSSLATGSSVGSLQTMLEE
GVSPSGDPTLPLICRTHVPPLELSQRSRTPQTLFNLQATRGRHRNWRGYSDCTNPNWIRQ
DPFDKDTGSVVRAGGPGQDGNPEQLSDNLSSFSLTSLHPPDSLALPLAKKCNSTGSLVLG
SLVVRNKDGRCLYGFDSWTETTGEDTERNASPAGVKTVAPGCRKNR
NT seq
5901 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgatcctgctgaactgtgtgacgctggggatgtaccagccctgcgagaacatc
gactgctcctccgaacgctgccagatcctgcaggccttcgatgccttcatctacatcttc
ttcgcgctggagatggtggtgaagatggtggcgctggggatcttcggccggtgcagttat
ctgggagacacctggaacagactggacttcttcatcgtgatggccggggtggtggagtat
tcactggacctgcagaacgtcaacctgacggccatccggacggtcagagtcctgcggccg
ctcaaagccatcaacagagtccccagcatgaggatcctggtgaatctgctgctggacaca
ttgccgatgttggggaacgtgctgttgctctgcttcttcgtcttcttcatcttcggcatc
atcggtgtgcagctctgggctggacttctgcgaaaccgctgctatcctccggagaacttc
accctctcaacaggtgtggcactccctgctccgtactactctctcgatgagaaggacgag
aggcccttcatctgctctctgccgcaggataacggcatcatgtcgtgcggtgacgtgccg
gcgcggcgtgtggcgggacatcagtgctgtctggacgtggatgatctcctgcaccatcag
gctctgggcctcgtgaccgagccctttctcaacgccagcgccgtcgtccccgggctctgt
gtcaactggaaccaatactacacacgctgccacaccggacacagaaacccacacaaagga
gccatcaactttgacaacatcggatacgcctggatcgttatatttcaggttattactctg
gagggctgggtggaaatcatgtattatgtcatggatgctcactcattctacaacttcatc
tactttattctgctgattataatcggctcgttcttcatgataaacctgtgtttggtcgtc
atagcgactcagttttcagagaccaaacagcgcgaacatcagctgatggaggagcagcga
gctgcccgtctgtcctccagcacactggactcgctggtcggacccagtgactgctatgaa
gaaatcttccagctcgtctgccacatcctacgcaaggtgcggcggcgcactgctgccttc
tgcaggatgctctgctacaaacctccggagcaggagcatgagaaaacaaacatcaatgga
agagagaagagcctccaacaacaagatggcactgcaccttccacctcagcagccaatcag
gagacagaagaggaggcagccatgaggaaagacaggaacaagagggaggagggggcgtgt
cagaggcggagccatgagctttggatggagatgagggtcaaactgcggggcatcgtggag
agtaaatacttcaacagaggaatcatggtggccatcctcattaacaccatcagcatgggc
atagagcaccatgagcagccggaggagctcactaatgttctggagatctgtaacatcgtc
ttcaccagtatgtttgctctggagatgattctcaagctcacagcattcggcttctttaat
tacctgcgcaatccgtacaacatctttgatgggatcatcgtgatcatcagtgtgtgtgag
atcgtgggtcagtctgacggtggtctctcggtgctccgcaccttccgcttgctgcgggtc
ctgaagctggttcggttcatgccggctctgcgcagacagctggtggttctgatgaagacc
atggacaatgtggccacattctgcatgctgctgatgctcttcatcttcatcttcagtatt
ttgggaatgcatatatttggctgcaagttcagtctgaagacggacaccggagacacagtc
ccggacagaaagaactttgactctctaatgtgggcgatcgtcactgtgtttcagatcctg
actcaggaggactggaacgtggtgctgtataacggcatggcctccacgtctcctctggtg
gcgctgtacttcgtggctctgatggcgtttgggaactacgtgctgttcaacctgctggtg
gccattctggtggagggatttcaggctgaaggggatgccaaccgctcgcactctgatgat
gatgatgagggaacttcctgtaatggaagtgaacagcacaaaaactcacttacctcctct
gatcccaagctgtcatctttaactcctaatgggcatctggatctggcgccgctggaggag
gagaagaccaggaccgagttctcagaggaacaccaccagagcaaagccatctgcctgggc
aggagatcctcgtctctgctccacagccgcagttcccattaccaccactggggccgtcct
ccctctcagccgtcctggagccggaggtgtagctggaacagcgcgggtcactccgtccgt
ggcctgagggccggaggggtcattggggggagcttacgggtccgcagcattcactcaaac
tctgcagaacacgagtctctcctgctccacccgcccttcctgtcacgccgacaccgccgc
gcgctctctctcgagctgcccgagctcctgcagcgccccccgctggtccggaagaagagc
gtgtctgcagaacaccaggactgtaatgggaagggcccgggccctcaggggacgctgctt
ggagaggtttatccacagctcaacgcacacaaagacaagaacaacctggtggaagatacg
gaatatagcctctgcttccgtatccagaagatgatggaggtttatcgtccggactggtgt
gagaagagagaggactggtcaatatacttattctcccctcagaacaagtttcgtctgctg
tgtcagacgatcatcgctcataaactctttgactatgtggttctggctttcatcttcctc
aactgcatcacagtggctctggagagacccagaatccatcagggcagtctggagcgagtc
ttcctcaccatctccaactatgttttcactgccatctttgtggctgagatgaccgtcaag
gtggtctctaagggtctgtatgtgggcgatcgggcgtatctgcgcagcagctggaacatt
ctggacgggtttctggtcttcgtgtctctggttgatatcgtggtgtcgatgacgggtgga
gcgaagatcctgggcgtcctgagggtgctccgactgctgagaacattacgcccgctcaga
gtgatcagtcgagctccgggtctgaagctggtggtggagactctgatcacgtcgctgaag
cccatcggaaacatcgtcctcatctgctgcgctttcttcatcatcttcggcatcctggga
gttcagctcttcaaagggaagttctattactgtgtgggtttggatgtgaagaacatcacc
aataaatccgactgtctgtctgccaattaccgctgggttcatcacaagtacaactttgac
aacctggggcaggctctgatgtccctgtttgtgttggcatctaaagatggatgggtaaat
atcatgtaccacgggctagacgctgtcgggatcgaccagcagcccgtcatcaataacaac
ccctggatgctgctgtacttcatctccttcctgctgatcgtcagtttcttcgtcttgaac
atgtttgtgggtgtggtggtggagaacttccacaagtgccgtcagcatcaggaggtggag
gaggcgcggaggagggaggagaagcggctgaagcgcatggagaagaggaggcgcaaggcc
cagcggctgccgtattactcctcgtacggtcgtgttcggctgatgattcactcgttctgc
accagtcattatctggacctcttcatcaccctcatcatctgcatcaatgtggtcaccatg
agcctggagcacttcaaccaaccacagtcgttggagacggcgctgaaatactgcaactac
ttcttcagctctacgtttgtggtggaggcaatgctgaagctcatcgcattcggcttcaga
cgcttctttaaagacagatggaatcagctggacctgtccatcgttctgctgtctgtgatg
ggaatcattctggaggagattgaaataagtgcttcacttcccatcaaccccaccatcatc
cgcatcatgagggtcctgcgcatcgcccgcgttctgaagttgttgaagatggccacagga
atgagagcgctgctcgataccgtggtgcaggcgttaccacaggtggggaatctgggtttg
ctctttgttctgctgttcttcatctacgctgcgctcggagtcgagttgtttggagaactg
gtgtgtaatgttgattacccgtgtgaaggcatgagtcgtcacgccacgtttgaaaacttc
ggcatggcgttcctgactctcttccaggtgtctacaggagataactggaacggcatcatg
aaggacacgctgcgcgagtgtccgccgggcgacaactattcgtgtaactccagcctgcag
atcatctcacccatgtactttgtcagcttcgttctgacggctcagttcgtcctgattaat
gtggtggtggccgtactgatgaagcacctggacgactccaataaagaggcgcaggaggat
gcagagatggaggcagagctggagatggagctggcgcagggcagtctgtgctgtatgggg
catctggagcgggccaccgggaccgatgcgggcgagaggctgccgatggctgtggttcac
accaacactaacaccagccagagcggattcccacagaaccagaggagactctactcaccg
gcacaggagaaccagtggctggagagcgtctctctgctgatgaaggactcactggatgga
gaaatgcagatgattgataatctctcaggatctgtgtttcaccattattgctctccacca
atcagacgagacagcaggagccaatcagaagagatccggctggcggaggtcgagcaaacc
tctctgatgtcggagcagctgtcagataaatcctcctcaccggcgctgactgatgacatc
agcctggacgagcacagcgactgtaaggagcacggcagcaccgaccggagcacagacgag
ctcgtgggcagaagctttcttcctcggagcgaggcgtccagtccagggcgagacagacgg
gatgtgcggcatgagacgagtcaccaccgagcagatggcagtggaggagacggccagatg
tcttcacctctctttcatctcccggctgagttcttccaccccaacaccgctgcgatcccc
cagggcagcccagccaccggagcggcccagccgggctccagacatgcatctccggcctca
tgggcttctctcaggtccccaggggccaacagcagggtcataggctctcagacgtcccac
agtaactcctcgctggccacgggcagttcagtgggcagcctgcagaccatgctggaggag
ggtgtctccccgtcaggagaccctacgctacccctgatctgcagaacccacgtccctcct
ctagagctcagccagagatctcgcactccacagactctgttcaatctccaggccaccagg
gggcgccacaggaattggagaggatacagtgactgcacaaaccctaactggatccgacag
gacccctttgacaaggacactggatcagtggttagggctggaggacccggtcaggatggt
aatccggaacagttgtcggataatttgagtagcttctctttgacgtctctgcacccgcca
gattcgctggcgctgccgctggccaagaagtgcaacagcactgggagtttagtactgggg
agcctagtggtccggaataaagatgggaggtgcctgtacggattcgattcttggactgaa
acaaccggtgaggacactgagaggaatgcgtcccccgctggtgtaaagactgtggctcct
gggtgccgtaagaacagatga
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