Carassius auratus (goldfish): 113091409
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Entry
113091409 CDS
T07313
Name
(RefSeq) probable ribonuclease ZC3H12B isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
caua03019
]
113091409
Messenger RNA biogenesis [BR:
caua03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113091409
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
KH_N4BP1_1st
Regnase_1_C
UBA_N4BP1_C
zf-CCCH_4
TNFR_ELAPOR1_6th
Omega-toxin
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
113091409
NCBI-ProteinID:
XP_026112707
Ensembl:
ENSCARG00000063443
UniProt:
A0A6P6NVA4
LinkDB
All DBs
Position
Unknown
AA seq
1020 aa
AA seq
DB search
MVLELAAPAGAGPALQRCIPHIQRVFRVRVSCSTAESSCENPNAGSSIIVNIEDGKEEDC
TKAKEYIVSLISPVHKHRERLTLWLQRRLHALRAAIEYESCAVVQVRDHALELQGGHAQV
MAACAMLQRLKMEHRGCREPQPLPAAAGHDSPEEEEEEDEEAAEDGSSSESDGEARSRSS
SSGGAVSTAGSGEGVTGRKQDLLIATKPHRQLCRSSCLDRPSFSQSNTFQELRADDTRSD
SSQRALAPPTSLAQMPLRQTSDRDYQTKMDFALKLGYSGEQVESVLSKLGSSALINDVLA
ELVRLGNKGDPESQAAVGSAGLMARAMGAKEAISPEASLEEDSSDTYDNLRPIVIDGSNV
AMSHGNKEVFSCLGIQLAVDWFLEKGHKDITVFVPAWRKEQSRPDAPIKDQEILRKLEKE
KILVFTPSRRVQGRRVVCYDDRFIVKLACDSDGIIVSNDNYRDLQNEKPEWKKFIEERLL
MYSFVNDKFMPPDDPLGRHGPSLENFLRKRPVVPEHKKQPCPYGQYSKSKKCTYGHKCKY
YHPERANQSQRAVADELRAFAKLSAVKTMSEGALAKCGTSGSSAKGDSSSEAKRVAPKRQ
SDPSIRSVACEQEERLCPMRKAEASSVPSLVSALSVPTMPLTKSHAAGALNTRSASSPVP
GSLHFTHSSLEHAGSVQYPPILVTNSQGASVAYGEPFPKYDSVVSDHGYYSMLSDFSTMS
LQDSFCSLEQPEPVGVGGGYPGRASMCPEPGRSHSSDSFSSYSGEMYLNSMEGSLDDSIK
GPPSQSQTQPLVQTRLQAFAHGFHHEALTRVQSYGTDEPKPGPRKQSSAHLAPHTQHPVV
GSRSSCPGDYPPLPQNVLPSASPSQQGRSLGMTRMDSISDSRLYESNPLRQRRPPLCREQ
HASWDPLPCGNEPYSYGSYGLTGGLMPCCERVMVRSMPEKMEQIWRSPWDSVPPPPPSAR
GPAEEPQERHPIPEHQYQTYRNLCNIFPAFVVHLVMEENPHMTDPQQLAAVIVTKLRSCH
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atggttttggagctcgccgcgcccgccggtgcaggccctgcgctccagcgctgcatcccg
cacatccagcgggttttccgggtccgagtgagctgcagcaccgcagagtccagctgcgaa
aatcccaacgccggctccagtatcatcgtaaacatcgaggacggcaaggaagaagattgc
actaaagctaaagagtacattgtgtcactgattagtcctgtgcataagcaccgtgagcgt
ttgactctttggctgcagcggcgactgcatgccctacgtgcagctattgagtacgagagc
tgcgctgtggtgcaggtgagggaccatgcactggagcttcagggaggtcatgcacaggta
atggctgcatgcgccatgctgcagcgcctgaagatggagcatcgcggctgccgtgaaccc
cagcccttgcccgctgctgctggccacgactctccagaagaagaggaggaggaggatgaa
gaagctgctgaagacgggagtagttctgagagcgatggcgaggcaaggtcacggagcagt
agttctggtggagccgtcagcacagcagggtcaggagaaggagtgaccggaaggaagcag
gacctgctcatagcaaccaaacctcaccggcagctatgccgctcatcctgtttggaccgt
cccagcttcagtcagagcaacacctttcaggagttacgtgcagatgacacccgctctgac
tcctcccagagagccctcgctccgcccacctccttggcccaaatgcccttgcgtcaaacc
agtgatcgagattaccaaaccaaaatggactttgctctaaaactgggctactccggagag
caggtggagtctgttttgagtaaactggggtccagtgctctaatcaatgatgtattggcc
gagctggtgcggctagggaataaaggagatccagagagtcaggcagcagtgggcagcgcc
ggtttaatggcacgggcaatgggagccaaagaagccataagccctgaggcatcactggag
gaagactcatcagacacgtatgacaacctccgacctatcgtgattgatggatccaatgtt
gccatgagccatggaaacaaagaggtgttctcatgcctgggcattcaactggctgttgat
tggttcctggagaagggccacaaagacatcacagttttcgtcccagcatggaggaaagaa
cagtcaagacctgatgcaccaatcaaagatcaggagatcctgcggaaattagagaaggaa
aagatccttgtcttcacaccgtctcgcagagtccaaggccgtcgagtggtttgctacgat
gaccgttttattgtcaagctggcctgcgactcagacgggatcattgtgtccaacgataac
taccgagacttgcagaatgagaaaccggagtggaagaaatttattgaggaacgactcctc
atgtacagcttcgtcaacgacaagttcatgcctcctgatgaccctttagggagacacgga
cccagtctggaaaattttctccgtaaacgaccagtggttccagagcacaagaagcagccg
tgtccttatggtcagtacagcaaaagtaagaagtgcacctacggccataagtgcaagtac
taccacccagaaagagccaaccaatcacaacgggctgtcgcagatgagctcagagccttt
gccaaactctctgctgtaaagacaatgagtgagggggcacttgccaaatgtgggacctct
ggttcttctgccaagggagatagtagctcagaggcaaagcgagtggcacccaagcgccag
tctgaccccagtatccggtcagttgcatgtgagcaagaagagagactctgtccaatgcgg
aaggccgaggccagttctgtaccgtctttagtgtcagcacttagcgttccaactatgcca
ctgacgaaaagtcacgctgctggcgctctgaacacacgctcagcgagcagccctgttcca
gggtctctgcacttcacccacagctcgcttgaacacgcaggcagtgtccagtatcccccc
atcctagtcaccaatagccagggcgcctctgtggcttacggtgagccgttcccaaagtat
gactctgtggtaagcgaccatggctactattcaatgctcagtgacttctccactatgagc
ctccaagacagtttttgcagtcttgaacagccagagcctgtaggggttggtggaggatat
ccaggaagagccagcatgtgtccagaacctggccgaagccattcatcagactccttctca
tcctacagtggagagatgtacctcaactcaatggagggcagcctggatgacagcataaaa
gggccaccttcgcagtcccagacacaacctttggtgcaaacgcgccttcaagcctttgct
cacggtttccaccatgaggccttgacacgtgtgcagagctacggaacggatgaacccaaa
ccgggtcctcgaaagcagtcctccgcccacctagcaccacacacccaacacccagttgtt
ggcagtcgatccagctgcccaggagactaccctcctctcccccagaatgtgctgccttct
gccagcccctcacagcagggtcgatccttgggcatgactcgaatggacagcatctctgac
tcacggctctacgagagcaacccgctgcgccaaaggagacctcctctttgcagagagcag
catgccagctgggaccctttgccgtgtggtaatgagccctacagttatggaagttatggt
ttaacgggaggtcttatgccttgctgtgaaagggtgatggtccgcagcatgcccgagaag
atggagcagatctggaggtccccatgggatagtgtgccgcctccaccgcccagtgctcgt
gggccagcggaggaaccccaagagcggcaccctattccagaacatcagtatcaaacctac
cgaaacctctgtaacatcttcccggcatttgtggtccatttggtcatggaggagaaccct
cacatgaccgatccccagcagctggctgccgtcattgtcaccaaactgcgctcttgccac
taa
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