Carassius auratus (goldfish): 113091646
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Entry
113091646 CDS
T07313
Name
(RefSeq) transcription factor Sox-21-A-like
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
caua
Carassius auratus (goldfish)
Brite
KEGG Orthology (KO) [BR:
caua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
caua03000
]
113091646
Transcription factors [BR:
caua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
113091646
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
113091646
NCBI-ProteinID:
XP_026113018
Ensembl:
ENSCARG00000031074
UniProt:
A0A6P6NWI5
LinkDB
All DBs
Position
6:4796930..4798013
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AA seq
230 aa
AA seq
DB search
MAKPMDHVKRPMNAFMVWSRAQRRKMALDNPKMHNSEISKRLGGEWKLLSDSEKRPFIDE
AKRLRAVHMKEHPDYKYRPRRKPKNMIKKDRYHFNVTYNPGDSDPLKTDSLSAEKSSVAA
ATRAFFTHQLSTNPYPFLDLTSKISELPPAPFPHYSMLGYPGGFSAFHGIPGLLAGAPHA
HPSAGNPGHMVPYNCLGWPGSGPAVPSSYVLLPGMTKAQHEPYLTYAAAI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcctatggaccatgttaaacgccccatgaacgctttcatggtgtggtcgaga
gcccagagacggaagatggcactggacaacccgaagatgcacaactctgagatcagcaaa
cgcctcggaggtgaatggaaactcctgtcagactccgaaaaaagaccttttattgacgag
gccaaacgcctcagagccgttcacatgaaagaacacccggattacaaatatagaccgcgg
cgaaagcccaaaaacatgatcaaaaaagataggtatcattttaatgtgacgtacaatccg
ggtgacagtgacccgctgaaaacagactcgctgagcgcggagaagtcgtctgtcgccgct
gctacccgggcgttttttactcaccaactgtccacaaatccctatccgtttctcgacctg
acctccaaaatctcggaattaccccctgcacctttcccacattactcaatgctcgggtat
cccgggggattctccgcgtttcacgggattcccggacttctggcaggtgcgccgcacgct
cacccgtctgcgggtaacccgggccacatggtgccctataactgcctgggctggccggga
tctggacctgctgttccttcatcgtacgtgcttttaccaggaatgaccaaagctcagcat
gaaccttatctgacgtacgctgcggcgatatga
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